RNA–Protein interactions for RNA: ENST00000574049.1

RPA1-207, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 3,849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-207ENST00000574049 NCOR1P1Q9H4R4 102 aa6.45□□□□□ -1.38
RPA1-207ENST00000574049 TAAR3PQ9P1P4 343 aa6.45□□□□□ -1.38
RPA1-207ENST00000574049 NPTNQ9Y639 398 aa6.45□□□□□ -1.38
RPA1-207ENST00000574049 RNF222A6NCQ9 220 aa6.45□□□□□ -1.38
RPA1-207ENST00000574049 COLCA2A8K830 154 aa6.45□□□□□ -1.38
RPA1-207ENST00000574049 RHBDL1O75783 438 aa6.45□□□□□ -1.38
RPA1-207ENST00000574049 SLC25A6P12236 298 aa6.45□□□□□ -1.38
RPA1-207ENST00000574049 SPCS3P61009 180 aa6.45□□□□□ -1.38
RPA1-207ENST00000574049 RPL19P84098 196 aaKnown RBP6.45□□□□□ -1.38
RPA1-207ENST00000574049 HOXA4Q00056 320 aaPredicted RBP6.45□□□□□ -1.38
RPA1-207ENST00000574049 KHDC1LQ5JSQ8 128 aa6.45□□□□□ -1.38
RPA1-207ENST00000574049 FDX2Q6P4F2 183 aa6.45□□□□□ -1.38
RPA1-207ENST00000574049 RBMXL3Q8N7X1 1067 aaKnown RBP6.45□□□□□ -1.38
RPA1-207ENST00000574049 CYB561D1Q8N8Q1 229 aa6.45□□□□□ -1.38
RPA1-207ENST00000574049 OR4A4PQ8NGN8 299 aa6.45□□□□□ -1.38
RPA1-207ENST00000574049 RPS4Y2Q8TD47 263 aa6.45□□□□□ -1.38
RPA1-207ENST00000574049 WDYHV1Q96HA8 205 aa6.45□□□□□ -1.38
RPA1-207ENST00000574049 S1PR3Q99500 378 aa6.45□□□□□ -1.38
RPA1-207ENST00000574049 MTCH1Q9NZJ7 389 aa6.45□□□□□ -1.38
RPA1-207ENST00000574049 RBFOX3A6NFN3 312 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 TRGC1P0CF51 173 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 ADCYAP1P18509 176 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 RAB4AP20338 218 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 MC5RP33032 325 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 TMEM50BP56557 158 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 FOXF2Q12947 444 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 ZNF345Q14585 488 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 UNQ9370/PRO34162Q6UXP9 181 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 EIF4E3Q8N5X7 224 aaKnown RBP6.44□□□□□ -1.38
RPA1-207ENST00000574049 OR52L2PQ8NGH6 319 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 OR13D1Q8NGV5 346 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 WNT5BQ9H1J7 359 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 ZNF665Q9H7R5 613 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 NBEAQ8NFP9 2946 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 IGKV1D-8A0A087WSZ0 117 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 TRBV5-7A0A0A0MS05 114 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 CELA3BP08861 270 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 TBPP20226 339 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 DTYMKP23919 212 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 CD200P41217 278 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 SRPXP78539 464 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 RBPJQ06330 500 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 RNPS1Q15287 305 aaKnown RBP6.44□□□□□ -1.38
RPA1-207ENST00000574049 FBXW9Q5XUX1 488 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 KCNIP4Q6PIL6 250 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 SPNS3Q6ZMD2 512 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 C14orf144Q96I85 54 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 DCTN5Q9BTE1 182 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 VAMP8Q9BV40 100 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 NGBQ9NPG2 151 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 SLC17A5Q9NRA2 495 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 FUT9Q9Y231 359 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 AUP1Q9Y679 476 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 A6NNC1 897 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 ZNF716A6NP11 495 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 HBE1P02100 147 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 CD3EP07766 207 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 FCGR3AP08637 254 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 ATP6V0CP27449 155 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 LGALS4P56470 323 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 SLC36A1Q7Z2H8 476 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 VKORC1L1Q8N0U8 176 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 C11orf42Q8N5U0 333 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 C9orf106Q8NAJ2 232 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 ZNF485Q8NCK3 441 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 ZNF596Q8TC21 504 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 ASB13Q8WXK3 278 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 SF3B5Q9BWJ5 86 aaKnown RBP6.44□□□□□ -1.38
RPA1-207ENST00000574049 STRAPQ9Y3F4 350 aaKnown RBP6.44□□□□□ -1.38
RPA1-207ENST00000574049 CENPEQ02224 2701 aa6.44□□□□□ -1.38
RPA1-207ENST00000574049 RNF212BA8MTL3 300 aa6.43□□□□□ -1.38
RPA1-207ENST00000574049 SMIM21Q3B7S5 101 aa6.43□□□□□ -1.38
RPA1-207ENST00000574049 OR10S1Q8NGN2 331 aa6.43□□□□□ -1.38
RPA1-207ENST00000574049 MRPL13Q9BYD1 178 aaKnown RBP6.43□□□□□ -1.38
RPA1-207ENST00000574049 RAB18Q9NP72 206 aa6.43□□□□□ -1.38
RPA1-207ENST00000574049 RAB9BQ9NP90 201 aa6.43□□□□□ -1.38
RPA1-207ENST00000574049 CLN8Q9UBY8 286 aa6.43□□□□□ -1.38
RPA1-207ENST00000574049 CTXN2P0C2S0 81 aa6.43□□□□□ -1.38
RPA1-207ENST00000574049 PMELP40967 661 aa6.43□□□□□ -1.38
RPA1-207ENST00000574049 RPL11P62913 178 aaKnown RBP6.43□□□□□ -1.38
RPA1-207ENST00000574049 UNQ6494/PRO21346Q6UXR6 183 aa6.43□□□□□ -1.38
RPA1-207ENST00000574049 DPPA3Q6W0C5 159 aa6.43□□□□□ -1.38
RPA1-207ENST00000574049 ST6GALNAC3Q8NDV1 305 aa6.43□□□□□ -1.38
RPA1-207ENST00000574049 SNRNP40Q96DI7 357 aaKnown RBP6.43□□□□□ -1.38
RPA1-207ENST00000574049 COMMD5Q9GZQ3 224 aa6.43□□□□□ -1.38
RPA1-207ENST00000574049 ALX4Q9H161 411 aaPredicted RBP6.43□□□□□ -1.38
RPA1-207ENST00000574049 PLEKHA2Q9HB19 425 aa6.43□□□□□ -1.38
RPA1-207ENST00000574049 TNFRSF19Q9NS68 423 aa6.43□□□□□ -1.38
RPA1-207ENST00000574049 TMEM160Q9NX00 188 aa6.43□□□□□ -1.38
RPA1-207ENST00000574049 FKBP11Q9NYL4 201 aa6.43□□□□□ -1.38
RPA1-207ENST00000574049 OR1A1Q9P1Q5 309 aa6.43□□□□□ -1.38
RPA1-207ENST00000574049 IGKV1-9A0A0C4DH69 117 aa6.43□□□□□ -1.38
RPA1-207ENST00000574049 LRRC30A6NM36 301 aa6.43□□□□□ -1.38
RPA1-207ENST00000574049 H0YIZ8 118 aa6.43□□□□□ -1.38
RPA1-207ENST00000574049 CD74P04233 296 aa6.43□□□□□ -1.38
RPA1-207ENST00000574049 PSMB3P49720 205 aa6.43□□□□□ -1.38
RPA1-207ENST00000574049 THBS3P49746 956 aa6.43□□□□□ -1.38
RPA1-207ENST00000574049 FAM3BP58499 235 aaPredicted RBP6.43□□□□□ -1.38
RPA1-207ENST00000574049 HLA-DRB3P79483 266 aa6.43□□□□□ -1.38
RPA1-207ENST00000574049 TNFAIP6P98066 277 aaPredicted RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms