RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 ACTR3CQ9C0K3 210 aaPredicted RBP15.98■□□□□ 0.15
SCARF1-206ENST00000573852 MANBALQ9NQG1 85 aa15.98■□□□□ 0.15
SCARF1-206ENST00000573852 A0A1W2PPQ1 181 aa15.97■□□□□ 0.15
SCARF1-206ENST00000573852 TMEM30CPA0ZSE6 113 aa15.97■□□□□ 0.15
SCARF1-206ENST00000573852 DVL1O14640 695 aa15.97■□□□□ 0.15
SCARF1-206ENST00000573852 LAMTOR5O43504 91 aa15.97■□□□□ 0.15
SCARF1-206ENST00000573852 HRASP01112 189 aa15.97■□□□□ 0.15
SCARF1-206ENST00000573852 MBP02144 154 aa15.97■□□□□ 0.15
SCARF1-206ENST00000573852 GYPAP02724 150 aa15.97■□□□□ 0.15
SCARF1-206ENST00000573852 TFF1P04155 84 aa15.97■□□□□ 0.15
SCARF1-206ENST00000573852 RAC2P15153 192 aa15.97■□□□□ 0.15
SCARF1-206ENST00000573852 AESQ08117 197 aa15.97■□□□□ 0.15
SCARF1-206ENST00000573852 DMRTC2Q8IXT2 367 aaPredicted RBP15.97■□□□□ 0.15
SCARF1-206ENST00000573852 SLC25A40Q8TBP6 338 aa15.97■□□□□ 0.15
SCARF1-206ENST00000573852 DEFB127Q9H1M4 99 aa15.97■□□□□ 0.15
SCARF1-206ENST00000573852 A0A1W2PNU3 283 aaPredicted RBP15.97■□□□□ 0.15
SCARF1-206ENST00000573852 HBZP02008 142 aa15.97■□□□□ 0.15
SCARF1-206ENST00000573852 COX5AP20674 150 aa15.97■□□□□ 0.15
SCARF1-206ENST00000573852 NPPCP23582 126 aa15.97■□□□□ 0.15
SCARF1-206ENST00000573852 IDH3GP51553 393 aaPredicted RBP15.97■□□□□ 0.15
SCARF1-206ENST00000573852 RNASEH2CQ8TDP1 164 aaKnown RBP15.97■□□□□ 0.15
SCARF1-206ENST00000573852 COL6A3P12111 3177 aa15.97■□□□□ 0.15
SCARF1-206ENST00000573852 SP1P08047 785 aa15.96■□□□□ 0.15
SCARF1-206ENST00000573852 SSTP61278 116 aa15.96■□□□□ 0.15
SCARF1-206ENST00000573852 COA6Q5JTJ3 125 aaKnown RBP15.96■□□□□ 0.15
SCARF1-206ENST00000573852 ZNF826PQ6ZT77 177 aa15.96■□□□□ 0.15
SCARF1-206ENST00000573852 CXorf67Q86X51 503 aaPredicted RBP15.96■□□□□ 0.15
SCARF1-206ENST00000573852 MRPL37Q9BZE1 423 aaKnown RBP15.96■□□□□ 0.15
SCARF1-206ENST00000573852 PSG7Q13046 419 aa15.96■□□□□ 0.15
SCARF1-206ENST00000573852 DDA1Q9BW61 102 aa15.96■□□□□ 0.15
SCARF1-206ENST00000573852 C1QTNF9BB2RNN3 333 aa15.95■□□□□ 0.14
SCARF1-206ENST00000573852 GALR2O43603 387 aaPredicted RBP15.95■□□□□ 0.14
SCARF1-206ENST00000573852 PAX1P15863 534 aa15.95■□□□□ 0.14
SCARF1-206ENST00000573852 SLC10A1Q14973 349 aa15.95■□□□□ 0.14
SCARF1-206ENST00000573852 Q6ZR03 302 aa15.95■□□□□ 0.14
SCARF1-206ENST00000573852 TMEM37Q8WXS4 190 aa15.95■□□□□ 0.14
SCARF1-206ENST00000573852 NEIL1Q96FI4 390 aaPredicted RBP15.95■□□□□ 0.14
SCARF1-206ENST00000573852 HES4Q9HCC6 221 aa15.95■□□□□ 0.14
SCARF1-206ENST00000573852 ST8SIA5O15466 376 aa15.95■□□□□ 0.14
SCARF1-206ENST00000573852 CLDN14O95500 239 aa15.95■□□□□ 0.14
SCARF1-206ENST00000573852 NUBP1P53384 320 aa15.95■□□□□ 0.14
SCARF1-206ENST00000573852 CATR1Q13166 79 aa15.95■□□□□ 0.14
SCARF1-206ENST00000573852 PRSS8Q16651 343 aa15.95■□□□□ 0.14
SCARF1-206ENST00000573852 Q3ZCU0 254 aa15.95■□□□□ 0.14
SCARF1-206ENST00000573852 TMEM170AQ8WVE7 144 aa15.95■□□□□ 0.14
SCARF1-206ENST00000573852 IFNA10P01566 189 aa15.94■□□□□ 0.14
SCARF1-206ENST00000573852 VWC2Q2TAL6 325 aa15.94■□□□□ 0.14
SCARF1-206ENST00000573852 SSX9Q7RTT3 188 aa15.94■□□□□ 0.14
SCARF1-206ENST00000573852 ZNF709Q8N972 641 aa15.94■□□□□ 0.14
SCARF1-206ENST00000573852 OR5T1Q8NG75 326 aa15.94■□□□□ 0.14
SCARF1-206ENST00000573852 MRGPRDQ8TDS7 321 aa15.94■□□□□ 0.14
SCARF1-206ENST00000573852 ANAPC16Q96DE5 110 aa15.94■□□□□ 0.14
SCARF1-206ENST00000573852 COQ2Q96H96 371 aa15.94■□□□□ 0.14
SCARF1-206ENST00000573852 FUT9Q9Y231 359 aa15.94■□□□□ 0.14
SCARF1-206ENST00000573852 PRRC2CQ9Y520 2896 aaKnown RBP15.94■□□□□ 0.14
SCARF1-206ENST00000573852 OOEPA6NGQ2 149 aa15.94■□□□□ 0.14
SCARF1-206ENST00000573852 RAB29O14966 203 aa15.94■□□□□ 0.14
SCARF1-206ENST00000573852 RBMXL2O75526 392 aaKnown RBP15.94■□□□□ 0.14
SCARF1-206ENST00000573852 MPV17P39210 176 aa15.94■□□□□ 0.14
SCARF1-206ENST00000573852 FAM3BP58499 235 aaPredicted RBP15.94■□□□□ 0.14
SCARF1-206ENST00000573852 H2BFWTQ7Z2G1 175 aa15.94■□□□□ 0.14
SCARF1-206ENST00000573852 OR2T10Q8NGZ9 312 aa15.94■□□□□ 0.14
SCARF1-206ENST00000573852 SPRR3Q9UBC9 169 aa15.94■□□□□ 0.14
SCARF1-206ENST00000573852 ZDBF2Q9HCK1 2354 aa15.94■□□□□ 0.14
SCARF1-206ENST00000573852 TMEM265A0A087WTH1 108 aa15.93■□□□□ 0.14
SCARF1-206ENST00000573852 LINC00473A8K010 186 aa15.93■□□□□ 0.14
SCARF1-206ENST00000573852 IQCF6A8MYZ5 107 aa15.93■□□□□ 0.14
SCARF1-206ENST00000573852 J3QW42 95 aa15.93■□□□□ 0.14
SCARF1-206ENST00000573852 GGCTO75223 188 aaKnown RBP15.93■□□□□ 0.14
SCARF1-206ENST00000573852 MRPL49Q13405 166 aaKnown RBP15.93■□□□□ 0.14
SCARF1-206ENST00000573852 SLC35E4Q6ICL7 350 aa15.93■□□□□ 0.14
SCARF1-206ENST00000573852 C11orf94C9JXX5 98 aa15.93■□□□□ 0.14
SCARF1-206ENST00000573852 EGR1P18146 543 aa15.93■□□□□ 0.14
SCARF1-206ENST00000573852 ACTL10Q5JWF8 245 aa15.93■□□□□ 0.14
SCARF1-206ENST00000573852 C11orf53Q8IXP5 236 aa15.93■□□□□ 0.14
SCARF1-206ENST00000573852 Q8N7P7 452 aa15.93■□□□□ 0.14
SCARF1-206ENST00000573852 TPRX1Q8N7U7 411 aa15.93■□□□□ 0.14
SCARF1-206ENST00000573852 KLF13Q9Y2Y9 288 aaPredicted RBP15.93■□□□□ 0.14
SCARF1-206ENST00000573852 IGHV3-43A0A0B4J1X8 118 aa15.92■□□□□ 0.14
SCARF1-206ENST00000573852 IGHV3-43DP0DP04 118 aa15.92■□□□□ 0.14
SCARF1-206ENST00000573852 BMP5P22003 454 aa15.92■□□□□ 0.14
SCARF1-206ENST00000573852 PDLIM4P50479 330 aa15.92■□□□□ 0.14
SCARF1-206ENST00000573852 GABRA6Q16445 453 aa15.92■□□□□ 0.14
SCARF1-206ENST00000573852 GCSAMLQ5JQS6 135 aa15.92■□□□□ 0.14
SCARF1-206ENST00000573852 RNFT1Q5M7Z0 435 aa15.92■□□□□ 0.14
SCARF1-206ENST00000573852 ZNF664Q8N3J9 261 aa15.92■□□□□ 0.14
SCARF1-206ENST00000573852 MDS2Q8NDY4 140 aa15.92■□□□□ 0.14
SCARF1-206ENST00000573852 NINJ1Q92982 152 aa15.92■□□□□ 0.14
SCARF1-206ENST00000573852 ACY3Q96HD9 319 aa15.92■□□□□ 0.14
SCARF1-206ENST00000573852 CIB3Q96Q77 187 aaPredicted RBP15.92■□□□□ 0.14
SCARF1-206ENST00000573852 OBP2BQ9NPH6 170 aa15.92■□□□□ 0.14
SCARF1-206ENST00000573852 IL17BQ9UHF5 180 aa15.92■□□□□ 0.14
SCARF1-206ENST00000573852 MKRN2OSH3BPM6 223 aa15.92■□□□□ 0.14
SCARF1-206ENST00000573852 MLNRO43193 412 aa15.92■□□□□ 0.14
SCARF1-206ENST00000573852 CRYAAP02489 173 aa15.92■□□□□ 0.14
SCARF1-206ENST00000573852 CHRNA7P36544 502 aa15.92■□□□□ 0.14
SCARF1-206ENST00000573852 GABRA2P47869 451 aa15.92■□□□□ 0.14
SCARF1-206ENST00000573852 FIP1L1Q6UN15 594 aaKnown RBP15.92■□□□□ 0.14
SCARF1-206ENST00000573852 AURKAIP1Q9NWT8 199 aaPredicted RBP15.92■□□□□ 0.14
SCARF1-206ENST00000573852 OR6C3Q9NZP0 311 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms