RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 CT45A6P0DMU7 189 aa5.83□□□□□ -1.48
NUP88-205ENST00000572809 CT45A5P0DMU8 189 aa5.83□□□□□ -1.48
NUP88-205ENST00000572809 CT45A7P0DMV0 189 aa5.83□□□□□ -1.48
NUP88-205ENST00000572809 SLC2A2P11168 524 aaPredicted RBP5.83□□□□□ -1.48
NUP88-205ENST00000572809 VDAC1P21796 283 aa5.83□□□□□ -1.48
NUP88-205ENST00000572809 GADD45AP24522 165 aa5.83□□□□□ -1.48
NUP88-205ENST00000572809 CNTFRP26992 372 aa5.83□□□□□ -1.48
NUP88-205ENST00000572809 SLC6A1P30531 599 aa5.83□□□□□ -1.48
NUP88-205ENST00000572809 MC5RP33032 325 aa5.83□□□□□ -1.48
NUP88-205ENST00000572809 MYCNOSP40205 109 aa5.83□□□□□ -1.48
NUP88-205ENST00000572809 THBS3P49746 956 aa5.83□□□□□ -1.48
NUP88-205ENST00000572809 HLA-DRB3P79483 266 aa5.83□□□□□ -1.48
NUP88-205ENST00000572809 PLA2G7Q13093 441 aa5.83□□□□□ -1.48
NUP88-205ENST00000572809 MOGAT2Q3SYC2 334 aa5.83□□□□□ -1.48
NUP88-205ENST00000572809 RPL39P5Q59GN2 51 aa5.83□□□□□ -1.48
NUP88-205ENST00000572809 C22orf42Q6IC83 251 aa5.83□□□□□ -1.48
NUP88-205ENST00000572809 LIN54Q6MZP7 749 aa5.83□□□□□ -1.48
NUP88-205ENST00000572809 FAM71F2Q6NXP2 309 aa5.83□□□□□ -1.48
NUP88-205ENST00000572809 C18orf65Q6ZTR6 163 aa5.83□□□□□ -1.48
NUP88-205ENST00000572809 ZNF695Q8IW36 515 aa5.83□□□□□ -1.48
NUP88-205ENST00000572809 NPBQ8NG41 125 aa5.83□□□□□ -1.48
NUP88-205ENST00000572809 OR10R2Q8NGX6 335 aa5.83□□□□□ -1.48
NUP88-205ENST00000572809 PTX4Q96A99 478 aa5.83□□□□□ -1.48
NUP88-205ENST00000572809 HSPB9Q9BQS6 159 aa5.83□□□□□ -1.48
NUP88-205ENST00000572809 CHCHD6Q9BRQ6 235 aa5.83□□□□□ -1.48
NUP88-205ENST00000572809 AGMATQ9BSE5 352 aa5.83□□□□□ -1.48
NUP88-205ENST00000572809 C12orf4Q9NQ89 552 aa5.83□□□□□ -1.48
NUP88-205ENST00000572809 NECAP2Q9NVZ3 263 aa5.83□□□□□ -1.48
NUP88-205ENST00000572809 TXNL4BQ9NX01 149 aaKnown RBP5.83□□□□□ -1.48
NUP88-205ENST00000572809 FAM30AQ9NZY2 134 aa5.83□□□□□ -1.48
NUP88-205ENST00000572809 OR1A1Q9P1Q5 309 aa5.83□□□□□ -1.48
NUP88-205ENST00000572809 KIAA1456Q9P272 454 aa5.83□□□□□ -1.48
NUP88-205ENST00000572809 ZNF107Q9UII5 783 aaPredicted RBP5.83□□□□□ -1.48
NUP88-205ENST00000572809 RNF150Q9ULK6 438 aa5.83□□□□□ -1.48
NUP88-205ENST00000572809 KCNK7Q9Y2U2 307 aa5.83□□□□□ -1.48
NUP88-205ENST00000572809 OR5H14A6NHG9 310 aa5.82□□□□□ -1.48
NUP88-205ENST00000572809 B5MCH6 92 aa5.82□□□□□ -1.48
NUP88-205ENST00000572809 RAB27BO00194 218 aa5.82□□□□□ -1.48
NUP88-205ENST00000572809 NBR2O15453 112 aa5.82□□□□□ -1.48
NUP88-205ENST00000572809 PROP1O75360 226 aa5.82□□□□□ -1.48
NUP88-205ENST00000572809 IGHG4P01861 327 aa5.82□□□□□ -1.48
NUP88-205ENST00000572809 OR5H8P0DN80 308 aa5.82□□□□□ -1.48
NUP88-205ENST00000572809 GNB3P16520 340 aa5.82□□□□□ -1.48
NUP88-205ENST00000572809 PSMB9P28065 219 aa5.82□□□□□ -1.48
NUP88-205ENST00000572809 FGF9P31371 208 aaPredicted RBP5.82□□□□□ -1.48
NUP88-205ENST00000572809 CDX1P47902 265 aaPredicted RBP5.82□□□□□ -1.48
NUP88-205ENST00000572809 FOXE3Q13461 319 aa5.82□□□□□ -1.48
NUP88-205ENST00000572809 C5orf64Q2M2E5 130 aa5.82□□□□□ -1.48
NUP88-205ENST00000572809 CXorf66Q5JRM2 361 aaPredicted RBP5.82□□□□□ -1.48
NUP88-205ENST00000572809 GLDNQ6ZMI3 551 aaPredicted RBP5.82□□□□□ -1.48
NUP88-205ENST00000572809 TPRA1Q86W33 373 aa5.82□□□□□ -1.48
NUP88-205ENST00000572809 KLHL30-AS1Q8NEE0 82 aa5.82□□□□□ -1.48
NUP88-205ENST00000572809 OR4A4PQ8NGN8 299 aa5.82□□□□□ -1.48
NUP88-205ENST00000572809 FCGR1BQ92637 280 aa5.82□□□□□ -1.48
NUP88-205ENST00000572809 KCTD7Q96MP8 289 aa5.82□□□□□ -1.48
NUP88-205ENST00000572809 PARP12Q9H0J9 701 aaKnown RBP5.82□□□□□ -1.48
NUP88-205ENST00000572809 ATG5Q9H1Y0 275 aa5.82□□□□□ -1.48
NUP88-205ENST00000572809 OR51J1Q9H342 316 aa5.82□□□□□ -1.48
NUP88-205ENST00000572809 RDH8Q9NYR8 311 aa5.82□□□□□ -1.48
NUP88-205ENST00000572809 ZNF221Q9UK13 617 aa5.82□□□□□ -1.48
NUP88-205ENST00000572809 STUB1Q9UNE7 303 aa5.82□□□□□ -1.48
NUP88-205ENST00000572809 SSR3Q9UNL2 185 aa5.82□□□□□ -1.48
NUP88-205ENST00000572809 A0A075B6Q4 140 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 IGHV7-81A0A0B4J1V7 117 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 A0A0B4J203 849 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 IGKV1-6A0A0C4DH72 117 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 SMIM30A4D0T7 59 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 H0YJW9 148 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 H7C2Y5 167 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 CCL24O00175 119 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 RRHO14718 337 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 BET1O15155 118 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 FABP7O15540 132 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 RBBP9O75884 186 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 NDUFA3O95167 84 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 HLA-DRB1P01911 266 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 GSTT2P0CG29 244 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 GSTT2BP0CG30 244 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 HIST1H1DP16402 221 aaKnown RBP5.81□□□□□ -1.48
NUP88-205ENST00000572809 PSMB8P28062 276 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 PPIFP30405 207 aaKnown RBP5.81□□□□□ -1.48
NUP88-205ENST00000572809 TALDO1P37837 337 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 SERPINB10P48595 397 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 RPS16P62249 146 aaKnown RBP5.81□□□□□ -1.48
NUP88-205ENST00000572809 CFHR3Q02985 330 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 ARFRP1Q13795 201 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 KIR2DS1Q14954 304 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 ARL6IP1Q15041 203 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 CDNFQ49AH0 187 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 IGSF11Q5DX21 431 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 TMEM65Q6PI78 240 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 FAM131AQ6UXB0 335 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 NR2C2APQ86WQ0 139 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 RNF152Q8N8N0 203 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 DRAXINQ8NBI3 349 aaPredicted RBP5.81□□□□□ -1.48
NUP88-205ENST00000572809 OR10J5Q8NHC4 309 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 MRAPQ8TCY5 172 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 P2RX4Q99571 388 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 RNF5Q99942 180 aa5.81□□□□□ -1.48
NUP88-205ENST00000572809 CENPOQ9BU64 300 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms