RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 HLA-DMAP28067 261 aa12.52□□□□□ -0.41
CHD3-215ENST00000572750 RCVRNP35243 200 aa12.52□□□□□ -0.41
CHD3-215ENST00000572750 HRH1P35367 487 aa12.52□□□□□ -0.41
CHD3-215ENST00000572750 RFX2P48378 723 aa12.52□□□□□ -0.41
CHD3-215ENST00000572750 TAS2R46P59540 309 aa12.52□□□□□ -0.41
CHD3-215ENST00000572750 FXYD4P59646 89 aa12.52□□□□□ -0.41
CHD3-215ENST00000572750 OR8H1Q8NGG4 311 aa12.52□□□□□ -0.41
CHD3-215ENST00000572750 OR5H2Q8NGV7 314 aa12.52□□□□□ -0.41
CHD3-215ENST00000572750 OR52I2Q8NH67 350 aa12.52□□□□□ -0.41
CHD3-215ENST00000572750 SECTM1Q8WVN6 248 aa12.52□□□□□ -0.41
CHD3-215ENST00000572750 NXF2Q9GZY0 626 aaKnown RBP12.52□□□□□ -0.41
CHD3-215ENST00000572750 LIN7CQ9NUP9 197 aaKnown RBP12.52□□□□□ -0.41
CHD3-215ENST00000572750 NBR2O15453 112 aa12.51□□□□□ -0.41
CHD3-215ENST00000572750 MC5RP33032 325 aa12.51□□□□□ -0.41
CHD3-215ENST00000572750 DGCR2P98153 550 aa12.51□□□□□ -0.41
CHD3-215ENST00000572750 TMEM17Q86X19 198 aa12.51□□□□□ -0.41
CHD3-215ENST00000572750 DIRAS2Q96HU8 199 aa12.51□□□□□ -0.41
CHD3-215ENST00000572750 RASL11BQ9BPW5 248 aa12.51□□□□□ -0.41
CHD3-215ENST00000572750 HSPB9Q9BQS6 159 aa12.51□□□□□ -0.41
CHD3-215ENST00000572750 WNT10AQ9GZT5 417 aa12.51□□□□□ -0.41
CHD3-215ENST00000572750 SLC35D1Q9NTN3 355 aa12.51□□□□□ -0.41
CHD3-215ENST00000572750 GAB2Q9UQC2 676 aa12.51□□□□□ -0.41
CHD3-215ENST00000572750 TET2Q6N021 2002 aaPredicted RBP12.5□□□□□ -0.41
CHD3-215ENST00000572750 LINC00473A8K010 186 aa12.5□□□□□ -0.41
CHD3-215ENST00000572750 SULT1C2O00338 296 aa12.5□□□□□ -0.41
CHD3-215ENST00000572750 DUTP33316 252 aaKnown RBP12.5□□□□□ -0.41
CHD3-215ENST00000572750 THBS3P49746 956 aa12.5□□□□□ -0.41
CHD3-215ENST00000572750 HERV-K104P61576 105 aa12.5□□□□□ -0.41
CHD3-215ENST00000572750 DYRK1AQ13627 763 aa12.5□□□□□ -0.41
CHD3-215ENST00000572750 IL18Q14116 193 aa12.5□□□□□ -0.41
CHD3-215ENST00000572750 OR2B11Q5JQS5 317 aa12.5□□□□□ -0.41
CHD3-215ENST00000572750 FOXB2Q5VYV0 432 aa12.5□□□□□ -0.41
CHD3-215ENST00000572750 KCTD9Q7L273 389 aa12.5□□□□□ -0.41
CHD3-215ENST00000572750 OVCH2Q7RTZ1 564 aa12.5□□□□□ -0.41
CHD3-215ENST00000572750 SLC35E3Q7Z769 313 aa12.5□□□□□ -0.41
CHD3-215ENST00000572750 PDPNQ86YL7 162 aa12.5□□□□□ -0.41
CHD3-215ENST00000572750 LYSMD2Q8IV50 215 aa12.5□□□□□ -0.41
CHD3-215ENST00000572750 WIPF2Q8TF74 440 aaPredicted RBP12.5□□□□□ -0.41
CHD3-215ENST00000572750 NOL4LQ96MY1 436 aaPredicted RBP12.5□□□□□ -0.41
CHD3-215ENST00000572750 GPHA2Q96T91 129 aa12.5□□□□□ -0.41
CHD3-215ENST00000572750 KIAA1456Q9P272 454 aa12.5□□□□□ -0.41
CHD3-215ENST00000572750 KLK11Q9UBX7 282 aa12.5□□□□□ -0.41
CHD3-215ENST00000572750 LINC00527Q9UJ94 153 aa12.5□□□□□ -0.41
CHD3-215ENST00000572750 RBMX2Q9Y388 322 aaKnown RBP12.5□□□□□ -0.41
CHD3-215ENST00000572750 DPPA5A6NC42 116 aa12.49□□□□□ -0.41
CHD3-215ENST00000572750 LINC01548A6NM66 108 aa12.49□□□□□ -0.41
CHD3-215ENST00000572750 TNFSF12O43508 249 aa12.49□□□□□ -0.41
CHD3-215ENST00000572750 NDUFA3O95167 84 aa12.49□□□□□ -0.41
CHD3-215ENST00000572750 IGHG2P01859 326 aa12.49□□□□□ -0.41
CHD3-215ENST00000572750 RTL8BQ17RB0 113 aa12.49□□□□□ -0.41
CHD3-215ENST00000572750 C5orf64Q2M2E5 130 aa12.49□□□□□ -0.41
CHD3-215ENST00000572750 ZNF660Q6AZW8 331 aaPredicted RBP12.49□□□□□ -0.41
CHD3-215ENST00000572750 C10orf99Q6UWK7 81 aa12.49□□□□□ -0.41
CHD3-215ENST00000572750 BVESQ8NE79 360 aa12.49□□□□□ -0.41
CHD3-215ENST00000572750 NPBQ8NG41 125 aa12.49□□□□□ -0.41
CHD3-215ENST00000572750 DDB2Q92466 427 aa12.49□□□□□ -0.41
CHD3-215ENST00000572750 ZNF2Q9BSG1 426 aaPredicted RBP12.49□□□□□ -0.41
CHD3-215ENST00000572750 SLC5A7Q9GZV3 580 aa12.49□□□□□ -0.41
CHD3-215ENST00000572750 FXYD6Q9H0Q3 95 aa12.49□□□□□ -0.41
CHD3-215ENST00000572750 CCL28Q9NRJ3 127 aa12.49□□□□□ -0.41
CHD3-215ENST00000572750 TAS2R8Q9NYW2 309 aa12.49□□□□□ -0.41
CHD3-215ENST00000572750 ZNF107Q9UII5 783 aaPredicted RBP12.49□□□□□ -0.41
CHD3-215ENST00000572750 M0QYG6 137 aa12.48□□□□□ -0.41
CHD3-215ENST00000572750 RRHO14718 337 aa12.48□□□□□ -0.41
CHD3-215ENST00000572750 FBXO24O75426 580 aa12.48□□□□□ -0.41
CHD3-215ENST00000572750 RBBP9O75884 186 aa12.48□□□□□ -0.41
CHD3-215ENST00000572750 TPPPO94811 219 aa12.48□□□□□ -0.41
CHD3-215ENST00000572750 CD28P10747 220 aa12.48□□□□□ -0.41
CHD3-215ENST00000572750 TNFSF8P32971 234 aa12.48□□□□□ -0.41
CHD3-215ENST00000572750 RPL30P62888 115 aaKnown RBP12.48□□□□□ -0.41
CHD3-215ENST00000572750 PLGLAQ15195 96 aa12.48□□□□□ -0.41
CHD3-215ENST00000572750 C15orf40Q8WUR7 153 aa12.48□□□□□ -0.41
CHD3-215ENST00000572750 GIMAP1Q8WWP7 306 aa12.48□□□□□ -0.41
CHD3-215ENST00000572750 FCAMRQ8WWV6 532 aa12.48□□□□□ -0.41
CHD3-215ENST00000572750 ADTRPQ96IZ2 230 aa12.48□□□□□ -0.41
CHD3-215ENST00000572750 HARBI1Q96MB7 349 aa12.48□□□□□ -0.41
CHD3-215ENST00000572750 FBXL15Q9H469 300 aa12.48□□□□□ -0.41
CHD3-215ENST00000572750 TPSG1Q9NRR2 321 aa12.48□□□□□ -0.41
CHD3-215ENST00000572750 MTFP1Q9UDX5 166 aa12.48□□□□□ -0.41
CHD3-215ENST00000572750 GABARAPH6UMI1 98 aa12.47□□□□□ -0.41
CHD3-215ENST00000572750 SLC22A5O76082 557 aa12.47□□□□□ -0.41
CHD3-215ENST00000572750 CRYZL1O95825 349 aa12.47□□□□□ -0.41
CHD3-215ENST00000572750 HLA-DRB1P01911 266 aa12.47□□□□□ -0.41
CHD3-215ENST00000572750 RPS16P62249 146 aaKnown RBP12.47□□□□□ -0.41
CHD3-215ENST00000572750 CBX3Q13185 183 aa12.47□□□□□ -0.41
CHD3-215ENST00000572750 EIF4EBP1Q13541 118 aaPredicted RBP12.47□□□□□ -0.41
CHD3-215ENST00000572750 PYHIN1Q6K0P9 492 aa12.47□□□□□ -0.41
CHD3-215ENST00000572750 FOXRED2Q8IWF2 684 aa12.47□□□□□ -0.41
CHD3-215ENST00000572750 SMIM4Q8WVI0 70 aa12.47□□□□□ -0.41
CHD3-215ENST00000572750 TCTEX1D2Q8WW35 142 aa12.47□□□□□ -0.41
CHD3-215ENST00000572750 MOB3AQ96BX8 217 aa12.47□□□□□ -0.41
CHD3-215ENST00000572750 FLYWCH2Q96CP2 140 aaKnown RBP12.47□□□□□ -0.41
CHD3-215ENST00000572750 METTL1Q9UBP6 276 aaKnown RBP12.47□□□□□ -0.41
CHD3-215ENST00000572750 AP4M1O00189 453 aa12.46□□□□□ -0.41
CHD3-215ENST00000572750 SLC25A17O43808 307 aa12.46□□□□□ -0.41
CHD3-215ENST00000572750 FCGR3BO75015 233 aa12.46□□□□□ -0.41
CHD3-215ENST00000572750 SPDEFO95238 335 aa12.46□□□□□ -0.41
CHD3-215ENST00000572750 CD3DP04234 171 aa12.46□□□□□ -0.41
CHD3-215ENST00000572750 MRPS10P82664 201 aaKnown RBP12.46□□□□□ -0.41
CHD3-215ENST00000572750 NDPQ00604 133 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms