RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 NKAIN3Q8N8D7 197 aa14.95□□□□□ -0.02
CCDC40-206ENST00000572083 DYNLRB2Q8TF09 96 aa14.95□□□□□ -0.02
CCDC40-206ENST00000572083 SNAPC3Q92966 411 aa14.95□□□□□ -0.02
CCDC40-206ENST00000572083 USMG5Q96IX5 58 aa14.95□□□□□ -0.02
CCDC40-206ENST00000572083 UQCC2Q9BRT2 126 aa14.95□□□□□ -0.02
CCDC40-206ENST00000572083 NICN1Q9BSH3 213 aa14.95□□□□□ -0.02
CCDC40-206ENST00000572083 KCNK15Q9H427 330 aa14.95□□□□□ -0.02
CCDC40-206ENST00000572083 PCLOQ9Y6V0 5065 aa14.94□□□□□ -0.02
CCDC40-206ENST00000572083 AIREO43918 545 aa14.94□□□□□ -0.02
CCDC40-206ENST00000572083 HTR2CP28335 458 aa14.94□□□□□ -0.02
CCDC40-206ENST00000572083 MOB1BQ7L9L4 216 aa14.94□□□□□ -0.02
CCDC40-206ENST00000572083 RPP25LQ8N5L8 163 aaKnown RBP14.94□□□□□ -0.02
CCDC40-206ENST00000572083 TMEM68Q96MH6 324 aa14.94□□□□□ -0.02
CCDC40-206ENST00000572083 PHB2Q99623 299 aa14.94□□□□□ -0.02
CCDC40-206ENST00000572083 SLC29A1Q99808 456 aa14.94□□□□□ -0.02
CCDC40-206ENST00000572083 HDHD3Q9BSH5 251 aaPredicted RBP14.94□□□□□ -0.02
CCDC40-206ENST00000572083 SLC35D1Q9NTN3 355 aa14.94□□□□□ -0.02
CCDC40-206ENST00000572083 GHRLQ9UBU3 117 aa14.94□□□□□ -0.02
CCDC40-206ENST00000572083 EXOSC1Q9Y3B2 195 aaKnown RBP14.94□□□□□ -0.02
CCDC40-206ENST00000572083 ZBTB25P24278 435 aa14.93□□□□□ -0.02
CCDC40-206ENST00000572083 RASSF2P50749 326 aa14.93□□□□□ -0.02
CCDC40-206ENST00000572083 RPS27AP62979 156 aaKnown RBP14.93□□□□□ -0.02
CCDC40-206ENST00000572083 HLA-DRB3P79483 266 aa14.93□□□□□ -0.02
CCDC40-206ENST00000572083 WDR89Q96FK6 387 aaPredicted RBP14.93□□□□□ -0.02
CCDC40-206ENST00000572083 TMEM59Q9BXS4 323 aa14.93□□□□□ -0.02
CCDC40-206ENST00000572083 ZNF221Q9UK13 617 aa14.93□□□□□ -0.02
CCDC40-206ENST00000572083 DIMT1Q9UNQ2 313 aaKnown RBP14.93□□□□□ -0.02
CCDC40-206ENST00000572083 SELENOKQ9Y6D0 94 aa14.93□□□□□ -0.02
CCDC40-206ENST00000572083 M0R1X1 148 aa14.92□□□□□ -0.02
CCDC40-206ENST00000572083 CRYGBP07316 175 aa14.92□□□□□ -0.02
CCDC40-206ENST00000572083 EXOSC2Q13868 293 aaKnown RBP14.92□□□□□ -0.02
CCDC40-206ENST00000572083 DEFB114Q30KQ6 69 aa14.92□□□□□ -0.02
CCDC40-206ENST00000572083 ADAD2Q8NCV1 583 aaKnown RBP14.92□□□□□ -0.02
CCDC40-206ENST00000572083 HARBI1Q96MB7 349 aa14.92□□□□□ -0.02
CCDC40-206ENST00000572083 OVOL2Q9BRP0 275 aa14.92□□□□□ -0.02
CCDC40-206ENST00000572083 NUPR2A6NF83 97 aa14.91□□□□□ -0.02
CCDC40-206ENST00000572083 PRH1P02810 166 aa14.91□□□□□ -0.02
CCDC40-206ENST00000572083 EWSR1Q01844 656 aaKnown RBP eCLIP14.91□□□□□ -0.02
CCDC40-206ENST00000572083 ZNF485Q8NCK3 441 aa14.91□□□□□ -0.02
CCDC40-206ENST00000572083 PTX4Q96A99 478 aa14.91□□□□□ -0.02
CCDC40-206ENST00000572083 AKIP1Q9NQ31 210 aa14.91□□□□□ -0.02
CCDC40-206ENST00000572083 PLEKHJ1Q9NW61 149 aa14.91□□□□□ -0.02
CCDC40-206ENST00000572083 ZNF230Q9UIE0 474 aaPredicted RBP14.91□□□□□ -0.02
CCDC40-206ENST00000572083 AK3Q9UIJ7 227 aa14.91□□□□□ -0.02
CCDC40-206ENST00000572083 A0A0A6YYD4 124 aa14.9□□□□□ -0.02
CCDC40-206ENST00000572083 MSGN1A6NI15 193 aa14.9□□□□□ -0.02
CCDC40-206ENST00000572083 SCTP09683 121 aa14.9□□□□□ -0.02
CCDC40-206ENST00000572083 UBBP0CG47 229 aa14.9□□□□□ -0.02
CCDC40-206ENST00000572083 RHOGP84095 191 aa14.9□□□□□ -0.02
CCDC40-206ENST00000572083 UNC119Q13432 240 aa14.9□□□□□ -0.02
CCDC40-206ENST00000572083 C9orf16Q9BUW7 83 aa14.9□□□□□ -0.02
CCDC40-206ENST00000572083 ZC4H2Q9NQZ6 224 aa14.9□□□□□ -0.02
CCDC40-206ENST00000572083 VPS13DQ5THJ4 4388 aa14.89□□□□□ -0.03
CCDC40-206ENST00000572083 A0A0J9YWU9 116 aa14.89□□□□□ -0.03
CCDC40-206ENST00000572083 IRGMA1A4Y4 181 aa14.89□□□□□ -0.03
CCDC40-206ENST00000572083 C2orf70A6NJV1 201 aa14.89□□□□□ -0.03
CCDC40-206ENST00000572083 OR9G9P0C7N8 305 aa14.89□□□□□ -0.03
CCDC40-206ENST00000572083 FOLR2P14207 255 aa14.89□□□□□ -0.03
CCDC40-206ENST00000572083 MRGPRG-AS1Q2M3A8 158 aa14.89□□□□□ -0.03
CCDC40-206ENST00000572083 KCNG3Q8TAE7 436 aa14.89□□□□□ -0.03
CCDC40-206ENST00000572083 GGTLC1Q9BX51 225 aa14.89□□□□□ -0.03
CCDC40-206ENST00000572083 TM2D1Q9BX74 207 aa14.89□□□□□ -0.03
CCDC40-206ENST00000572083 TRBV6-6A0A0A6YYG2 114 aa14.88□□□□□ -0.03
CCDC40-206ENST00000572083 FAM223BA6NKX1 122 aa14.88□□□□□ -0.03
CCDC40-206ENST00000572083 SRRM4A7MD48 611 aaKnown RBP14.88□□□□□ -0.03
CCDC40-206ENST00000572083 PPP5D1E7EU14 171 aa14.88□□□□□ -0.03
CCDC40-206ENST00000572083 SHOXO15266 292 aa14.88□□□□□ -0.03
CCDC40-206ENST00000572083 MPPED1O15442 326 aa14.88□□□□□ -0.03
CCDC40-206ENST00000572083 DEDDO75618 318 aa14.88□□□□□ -0.03
CCDC40-206ENST00000572083 HLA-AP01891 365 aaKnown RBP14.88□□□□□ -0.03
CCDC40-206ENST00000572083 KIR2DS2P43631 304 aa14.88□□□□□ -0.03
CCDC40-206ENST00000572083 ZNF45Q02386 682 aa14.88□□□□□ -0.03
CCDC40-206ENST00000572083 INSL4Q14641 139 aa14.88□□□□□ -0.03
CCDC40-206ENST00000572083 TNXAQ16473 311 aa14.88□□□□□ -0.03
CCDC40-206ENST00000572083 SLC16A13Q7RTY0 426 aa14.88□□□□□ -0.03
CCDC40-206ENST00000572083 FAM223AQ8IWN6 122 aa14.88□□□□□ -0.03
CCDC40-206ENST00000572083 CACNG8Q8WXS5 425 aa14.88□□□□□ -0.03
CCDC40-206ENST00000572083 GGHQ92820 318 aa14.88□□□□□ -0.03
CCDC40-206ENST00000572083 TMEM80Q96HE8 168 aa14.88□□□□□ -0.03
CCDC40-206ENST00000572083 RDH8Q9NYR8 311 aa14.88□□□□□ -0.03
CCDC40-206ENST00000572083 IGKV1-6A0A0C4DH72 117 aa14.87□□□□□ -0.03
CCDC40-206ENST00000572083 TUSC2O75896 110 aa14.87□□□□□ -0.03
CCDC40-206ENST00000572083 CELP19835 753 aa14.87□□□□□ -0.03
CCDC40-206ENST00000572083 TAS2R43P59537 309 aa14.87□□□□□ -0.03
CCDC40-206ENST00000572083 ATP5G2Q06055 141 aa14.87□□□□□ -0.03
CCDC40-206ENST00000572083 MED21Q13503 144 aa14.87□□□□□ -0.03
CCDC40-206ENST00000572083 CEMP1Q6PRD7 247 aaPredicted RBP14.87□□□□□ -0.03
CCDC40-206ENST00000572083 IDO2Q6ZQW0 420 aa14.87□□□□□ -0.03
CCDC40-206ENST00000572083 SRSF12Q8WXF0 261 aaKnown RBP14.87□□□□□ -0.03
CCDC40-206ENST00000572083 RIMS4Q9H426 269 aaPredicted RBP14.87□□□□□ -0.03
CCDC40-206ENST00000572083 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.86□□□□□ -0.03
CCDC40-206ENST00000572083 SOCS1O15524 211 aa14.86□□□□□ -0.03
CCDC40-206ENST00000572083 MAPK3P27361 379 aaPredicted RBP14.86□□□□□ -0.03
CCDC40-206ENST00000572083 ZFP1Q6P2D0 407 aa14.86□□□□□ -0.03
CCDC40-206ENST00000572083 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.86□□□□□ -0.03
CCDC40-206ENST00000572083 OR2D2Q9H210 308 aa14.86□□□□□ -0.03
CCDC40-206ENST00000572083 Q9N2K0 584 aa14.86□□□□□ -0.03
CCDC40-206ENST00000572083 SDHAF2Q9NX18 166 aa14.86□□□□□ -0.03
CCDC40-206ENST00000572083 TECRQ9NZ01 308 aaKnown RBP14.86□□□□□ -0.03
CCDC40-206ENST00000572083 MGAT4AQ9UM21 535 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms