RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 RPL8P62917 257 aaKnown RBP2.97□□□□□ -1.93
SMG6-208ENST00000570874 ZNF85Q03923 595 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 RPL18Q07020 188 aaKnown RBP2.97□□□□□ -1.93
SMG6-208ENST00000570874 SRSF4Q08170 494 aaKnown RBP2.97□□□□□ -1.93
SMG6-208ENST00000570874 INSL4Q14641 139 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 CDSNQ15517 529 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 TGIF1Q15583 401 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 MESTQ5EB52 335 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 TMEM69Q5SWH9 247 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 DCAF12Q5T6F0 453 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 FAM162BQ5T6X4 162 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 STPG1Q5TH74 334 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 NXNL2Q5VZ03 156 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 GSG1LQ6UXU4 331 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 OAFQ86UD1 273 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 ZNF440Q8IYI8 595 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 MUC15Q8N387 334 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 SPICQ8N5J4 248 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 PRR26Q8N8Z3 221 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 ZNF485Q8NCK3 441 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 OR2T33Q8NG76 320 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 OR2M3Q8NG83 312 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 OR11G2Q8NGC1 345 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 OR4K17Q8NGC6 315 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 OR52L1Q8NGH7 329 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 OR52E2Q8NGJ4 325 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 OR1L8Q8NGR8 309 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 OR2K2Q8NGT1 345 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 OR5W2Q8NH69 310 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 ZNRF2Q8NHG8 242 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 GATAD1Q8WUU5 269 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 TMED6Q8WW62 240 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 RND1Q92730 232 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 ZMYND19Q96E35 227 aaPredicted RBP2.97□□□□□ -1.93
SMG6-208ENST00000570874 SCMH1Q96GD3 660 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 LIN37Q96GY3 246 aaPredicted RBP2.97□□□□□ -1.93
SMG6-208ENST00000570874 TSPAN32Q96QS1 320 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 NMNAT3Q96T66 252 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 NKX3-1Q99801 234 aaPredicted RBP2.97□□□□□ -1.93
SMG6-208ENST00000570874 RASL11BQ9BPW5 248 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 SULT4A1Q9BR01 284 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 AGMATQ9BSE5 352 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 ISG20L2Q9H9L3 353 aaKnown RBP2.97□□□□□ -1.93
SMG6-208ENST00000570874 EXOSC3Q9NQT5 275 aaKnown RBP2.97□□□□□ -1.93
SMG6-208ENST00000570874 PLSCR3Q9NRY6 295 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 TMEM38BQ9NVV0 291 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 MED9Q9NWA0 146 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 TXNL4BQ9NX01 149 aaKnown RBP2.97□□□□□ -1.93
SMG6-208ENST00000570874 WIPI2Q9Y4P8 454 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 CHCHD2Q9Y6H1 151 aaPredicted RBP2.97□□□□□ -1.93
SMG6-208ENST00000570874 V9GYH0 126 aa2.97□□□□□ -1.93
SMG6-208ENST00000570874 WDR87Q6ZQQ6 2873 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 RAI1Q7Z5J4 1906 aaPredicted RBP2.96□□□□□ -1.94
SMG6-208ENST00000570874 A0A087WX48 190 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 IGKV1D-43A0A0B4J1Z2 117 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 TMEM189A5PLL7 270 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 NAP1L6A6NFF2 107 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 OR5B21A6NL26 309 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 LYRM9A8MSI8 78 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 ZNF814B7Z6K7 855 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 J3QRE1 110 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 OVOL3O00110 214 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 CORTO00230 105 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 LYRM1O43325 122 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 HOXA3O43365 443 aaPredicted RBP2.96□□□□□ -1.94
SMG6-208ENST00000570874 RAMP1O60894 148 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 NPIPB7O75200 414 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 ZNF780AO75290 641 aaPredicted RBP2.96□□□□□ -1.94
SMG6-208ENST00000570874 CA11O75493 328 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 NDUFB2O95178 105 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 CLDN1O95832 211 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 RENP00797 406 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 OXTP01178 125 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 HPNP05981 417 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 WT1P19544 449 aaPredicted RBP2.96□□□□□ -1.94
SMG6-208ENST00000570874 FGF7P21781 194 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 CD96P40200 585 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 RPS27P42677 84 aaKnown RBP2.96□□□□□ -1.94
SMG6-208ENST00000570874 RFX2P48378 723 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 PTH2RP49190 550 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 RAB5CP51148 216 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 SSR4P51571 173 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 POLR2HP52434 150 aaKnown RBP2.96□□□□□ -1.94
SMG6-208ENST00000570874 HSPE1P61604 102 aaKnown RBP2.96□□□□□ -1.94
SMG6-208ENST00000570874 RPS28P62857 69 aaKnown RBP2.96□□□□□ -1.94
SMG6-208ENST00000570874 CFHR3Q02985 330 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 FAM27E3Q08E93 113 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 ARL16Q0P5N6 197 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 KIR3DS1Q14943 382 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 OPCMLQ14982 345 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 OR7A5Q15622 319 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 TRIP6Q15654 476 aaKnown RBP2.96□□□□□ -1.94
SMG6-208ENST00000570874 UBE2V2Q15819 145 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 ZNF79Q15937 498 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 CSRP2Q16527 193 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 GUCA2BQ16661 112 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 PYDC2Q56P42 97 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 FAM27D1Q5T7N8 215 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 LINC01590Q5TEZ4 76 aa2.96□□□□□ -1.94
SMG6-208ENST00000570874 C1orf140Q5VVS0 124 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms