RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 CLCC1Q96S66 551 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 CENPOQ9BU64 300 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 GON7Q9BXV9 100 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 OR2D2Q9H210 308 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 GHITMQ9H3K2 345 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.21□□□□□ -1.74
CHD3-212ENST00000570758 SLC35D1Q9NTN3 355 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 SDHAF2Q9NX18 166 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 NUBP2Q9Y5Y2 271 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 A3GALT2U3KPV4 340 aa4.21□□□□□ -1.74
CHD3-212ENST00000570758 A0A1W2PN81 502 aa4.2□□□□□ -1.74
CHD3-212ENST00000570758 TMEM235A6NFC5 223 aa4.2□□□□□ -1.74
CHD3-212ENST00000570758 SRRM4A7MD48 611 aaKnown RBP4.2□□□□□ -1.74
CHD3-212ENST00000570758 I3L521 148 aa4.2□□□□□ -1.74
CHD3-212ENST00000570758 J3QRK9 145 aa4.2□□□□□ -1.74
CHD3-212ENST00000570758 ARPC1BO15143 372 aaKnown RBP4.2□□□□□ -1.74
CHD3-212ENST00000570758 SLC25A17O43808 307 aa4.2□□□□□ -1.74
CHD3-212ENST00000570758 DUS4LO95620 317 aaKnown RBP4.2□□□□□ -1.74
CHD3-212ENST00000570758 DIRAS3O95661 229 aa4.2□□□□□ -1.74
CHD3-212ENST00000570758 CA2P00918 260 aa4.2□□□□□ -1.74
CHD3-212ENST00000570758 IGLV2-23P01705 113 aa4.2□□□□□ -1.74
CHD3-212ENST00000570758 APOA2P02652 100 aa4.2□□□□□ -1.74
CHD3-212ENST00000570758 CRYGBP07316 175 aa4.2□□□□□ -1.74
CHD3-212ENST00000570758 DTYMKP23919 212 aa4.2□□□□□ -1.74
CHD3-212ENST00000570758 CHRNA7P36544 502 aa4.2□□□□□ -1.74
CHD3-212ENST00000570758 TALDO1P37837 337 aa4.2□□□□□ -1.74
CHD3-212ENST00000570758 RAB9AP51151 201 aa4.2□□□□□ -1.74
CHD3-212ENST00000570758 LUMP51884 338 aaPredicted RBP4.2□□□□□ -1.74
CHD3-212ENST00000570758 RPS16P62249 146 aaKnown RBP4.2□□□□□ -1.74
CHD3-212ENST00000570758 GNB1P62873 340 aa4.2□□□□□ -1.74
CHD3-212ENST00000570758 SSBP2P81877 361 aaPredicted RBP4.2□□□□□ -1.74
CHD3-212ENST00000570758 RUNX1Q01196 453 aa4.2□□□□□ -1.74
CHD3-212ENST00000570758 PJVKQ0ZLH3 352 aa4.2□□□□□ -1.74
CHD3-212ENST00000570758 FHL3Q13643 280 aa4.2□□□□□ -1.74
CHD3-212ENST00000570758 PLGLAQ15195 96 aa4.2□□□□□ -1.74
CHD3-212ENST00000570758 SRSF7Q16629 238 aaKnown RBP eCLIP4.2□□□□□ -1.74
CHD3-212ENST00000570758 ECSCRQ19T08 205 aa4.2□□□□□ -1.74
CHD3-212ENST00000570758 MRGPRG-AS1Q2M3A8 158 aa4.2□□□□□ -1.74
CHD3-212ENST00000570758 HACD4Q5VWC8 232 aa4.2□□□□□ -1.74
CHD3-212ENST00000570758 SFXN4Q6P4A7 337 aa4.2□□□□□ -1.74
CHD3-212ENST00000570758 PPP1R27Q86WC6 154 aa4.2□□□□□ -1.74
CHD3-212ENST00000570758 PDPNQ86YL7 162 aa4.2□□□□□ -1.74
CHD3-212ENST00000570758 BVESQ8NE79 360 aa4.2□□□□□ -1.74
CHD3-212ENST00000570758 OR10J5Q8NHC4 309 aa4.2□□□□□ -1.74
CHD3-212ENST00000570758 ABHD5Q8WTS1 349 aa4.2□□□□□ -1.74
CHD3-212ENST00000570758 SLC25A38Q96DW6 304 aa4.2□□□□□ -1.74
CHD3-212ENST00000570758 UBE2E2Q96LR5 201 aa4.2□□□□□ -1.74
CHD3-212ENST00000570758 TSNAXQ99598 290 aaKnown RBP4.2□□□□□ -1.74
CHD3-212ENST00000570758 RNF5Q99942 180 aa4.2□□□□□ -1.74
CHD3-212ENST00000570758 GINS4Q9BRT9 223 aa4.2□□□□□ -1.74
CHD3-212ENST00000570758 FAM103A1Q9BTL3 118 aaKnown RBP4.2□□□□□ -1.74
CHD3-212ENST00000570758 MCRIP2Q9BUT9 160 aaKnown RBP4.2□□□□□ -1.74
CHD3-212ENST00000570758 ST6GALNAC5Q9BVH7 336 aa4.2□□□□□ -1.74
CHD3-212ENST00000570758 GPR61Q9BZJ8 451 aa4.2□□□□□ -1.74
CHD3-212ENST00000570758 ALX4Q9H161 411 aaPredicted RBP4.2□□□□□ -1.74
CHD3-212ENST00000570758 RHBDL2Q9NX52 303 aa4.2□□□□□ -1.74
CHD3-212ENST00000570758 METTL1Q9UBP6 276 aaKnown RBP4.2□□□□□ -1.74
CHD3-212ENST00000570758 FOXA2Q9Y261 457 aaPredicted RBP4.2□□□□□ -1.74
CHD3-212ENST00000570758 VSIG4Q9Y279 399 aa4.2□□□□□ -1.74
CHD3-212ENST00000570758 DNAH9Q9NYC9 4486 aa4.2□□□□□ -1.74
CHD3-212ENST00000570758 TRAV18A0A075B6X5 111 aa4.19□□□□□ -1.74
CHD3-212ENST00000570758 IGKV1D-13A0A0B4J2D9 117 aa4.19□□□□□ -1.74
CHD3-212ENST00000570758 LINC00473A8K010 186 aa4.19□□□□□ -1.74
CHD3-212ENST00000570758 SPDEFO95238 335 aa4.19□□□□□ -1.74
CHD3-212ENST00000570758 IGKV1-13P0DP09 117 aa4.19□□□□□ -1.74
CHD3-212ENST00000570758 NFYAP23511 347 aaPredicted RBP4.19□□□□□ -1.74
CHD3-212ENST00000570758 DUTP33316 252 aaKnown RBP4.19□□□□□ -1.74
CHD3-212ENST00000570758 GNG2P59768 71 aa4.19□□□□□ -1.74
CHD3-212ENST00000570758 RPL30P62888 115 aaKnown RBP4.19□□□□□ -1.74
CHD3-212ENST00000570758 ARL6IP1Q15041 203 aa4.19□□□□□ -1.74
CHD3-212ENST00000570758 TMEM177Q53S58 311 aa4.19□□□□□ -1.74
CHD3-212ENST00000570758 IDNKQ5T6J7 187 aa4.19□□□□□ -1.74
CHD3-212ENST00000570758 TMEM65Q6PI78 240 aa4.19□□□□□ -1.74
CHD3-212ENST00000570758 UNQ5815/PRO19632Q6UWF5 114 aa4.19□□□□□ -1.74
CHD3-212ENST00000570758 ZNF562Q6V9R5 426 aa4.19□□□□□ -1.74
CHD3-212ENST00000570758 LFNGQ8NES3 379 aa4.19□□□□□ -1.74
CHD3-212ENST00000570758 OR11H1Q8NG94 326 aa4.19□□□□□ -1.74
CHD3-212ENST00000570758 OR5M8Q8NGP6 311 aa4.19□□□□□ -1.74
CHD3-212ENST00000570758 OR1N2Q8NGR9 330 aa4.19□□□□□ -1.74
CHD3-212ENST00000570758 GRPEL2Q8TAA5 225 aa4.19□□□□□ -1.74
CHD3-212ENST00000570758 DDB2Q92466 427 aa4.19□□□□□ -1.74
CHD3-212ENST00000570758 FLYWCH2Q96CP2 140 aaKnown RBP4.19□□□□□ -1.74
CHD3-212ENST00000570758 YIPF6Q96EC8 236 aa4.19□□□□□ -1.74
CHD3-212ENST00000570758 HARBI1Q96MB7 349 aa4.19□□□□□ -1.74
CHD3-212ENST00000570758 MS4A10Q96PG2 267 aa4.19□□□□□ -1.74
CHD3-212ENST00000570758 SCOCQ9UIL1 159 aa4.19□□□□□ -1.74
CHD3-212ENST00000570758 RBM7Q9Y580 266 aaKnown RBP4.19□□□□□ -1.74
CHD3-212ENST00000570758 IGHV4OR15-8A0A075B7B6 117 aa4.18□□□□□ -1.74
CHD3-212ENST00000570758 A0A087WW49 117 aa4.18□□□□□ -1.74
CHD3-212ENST00000570758 A0A087WXM4 84 aa4.18□□□□□ -1.74
CHD3-212ENST00000570758 SEC14L6B5MCN3 397 aa4.18□□□□□ -1.74
CHD3-212ENST00000570758 SHOXO15266 292 aa4.18□□□□□ -1.74
CHD3-212ENST00000570758 TUSC2O75896 110 aa4.18□□□□□ -1.74
CHD3-212ENST00000570758 SCGNO76038 276 aa4.18□□□□□ -1.74
CHD3-212ENST00000570758 CRYZL1O95825 349 aa4.18□□□□□ -1.74
CHD3-212ENST00000570758 IGLV2-14P01704 120 aa4.18□□□□□ -1.74
CHD3-212ENST00000570758 IGHV3-11P01762 117 aa4.18□□□□□ -1.74
CHD3-212ENST00000570758 HLA-DQB1P01920 261 aa4.18□□□□□ -1.74
CHD3-212ENST00000570758 FCER2P06734 321 aa4.18□□□□□ -1.74
CHD3-212ENST00000570758 LGALS1P09382 135 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms