RNA–Protein interactions for RNA: ENST00000570510.6

VPS53-207, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 4

Gene VPS53, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-207ENST00000570510 KMT2AQ03164 3969 aa8.42□□□□□ -1.06
VPS53-207ENST00000570510 A0A087WXM4 84 aa8.41□□□□□ -1.06
VPS53-207ENST00000570510 IFITM5A6NNB3 132 aa8.41□□□□□ -1.06
VPS53-207ENST00000570510 OR11H12B2RN74 326 aa8.41□□□□□ -1.06
VPS53-207ENST00000570510 ITGB1BP1O14713 200 aa8.41□□□□□ -1.06
VPS53-207ENST00000570510 SOX15O60248 233 aa8.41□□□□□ -1.06
VPS53-207ENST00000570510 NDUFB8O95169 186 aa8.41□□□□□ -1.06
VPS53-207ENST00000570510 ZNF137PP52743 207 aa8.41□□□□□ -1.06
VPS53-207ENST00000570510 LSAMPQ13449 338 aa8.41□□□□□ -1.06
VPS53-207ENST00000570510 C5orf64Q2M2E5 130 aa8.41□□□□□ -1.06
VPS53-207ENST00000570510 ZNF660Q6AZW8 331 aaPredicted RBP8.41□□□□□ -1.06
VPS53-207ENST00000570510 UNQ5815/PRO19632Q6UWF5 114 aa8.41□□□□□ -1.06
VPS53-207ENST00000570510 LINC00322Q6ZN03 302 aaPredicted RBP8.41□□□□□ -1.06
VPS53-207ENST00000570510 OR56B1Q8NGI3 324 aa8.41□□□□□ -1.06
VPS53-207ENST00000570510 PLPPR1Q8TBJ4 325 aa8.41□□□□□ -1.06
VPS53-207ENST00000570510 NEK7Q8TDX7 302 aa8.41□□□□□ -1.06
VPS53-207ENST00000570510 CCDC107Q8WV48 283 aa8.41□□□□□ -1.06
VPS53-207ENST00000570510 ORAI1Q96D31 301 aa8.41□□□□□ -1.06
VPS53-207ENST00000570510 GFOD1Q9NXC2 390 aa8.41□□□□□ -1.06
VPS53-207ENST00000570510 TRAPPC2LQ9UL33 140 aa8.41□□□□□ -1.06
VPS53-207ENST00000570510 SSR3Q9UNL2 185 aa8.41□□□□□ -1.06
VPS53-207ENST00000570510 A0A0G2JLM5 398 aa8.4□□□□□ -1.06
VPS53-207ENST00000570510 METTL21EPA6NDL7 271 aa8.4□□□□□ -1.06
VPS53-207ENST00000570510 C15orf65H3BRN8 121 aa8.4□□□□□ -1.06
VPS53-207ENST00000570510 RAB3BP20337 219 aa8.4□□□□□ -1.06
VPS53-207ENST00000570510 KLF5Q13887 457 aaPredicted RBP8.4□□□□□ -1.06
VPS53-207ENST00000570510 INSL4Q14641 139 aa8.4□□□□□ -1.06
VPS53-207ENST00000570510 GUCA2BQ16661 112 aa8.4□□□□□ -1.06
VPS53-207ENST00000570510 SIGIRRQ6IA17 410 aa8.4□□□□□ -1.06
VPS53-207ENST00000570510 PPP1R27Q86WC6 154 aa8.4□□□□□ -1.06
VPS53-207ENST00000570510 CROCCP3Q8IVE0 287 aa8.4□□□□□ -1.06
VPS53-207ENST00000570510 FAM3DQ96BQ1 224 aa8.4□□□□□ -1.06
VPS53-207ENST00000570510 RHOVQ96L33 236 aa8.4□□□□□ -1.06
VPS53-207ENST00000570510 THAP7Q9BT49 309 aaPredicted RBP8.4□□□□□ -1.06
VPS53-207ENST00000570510 PLEKHJ1Q9NW61 149 aa8.4□□□□□ -1.06
VPS53-207ENST00000570510 PEMTQ9UBM1 199 aa8.4□□□□□ -1.06
VPS53-207ENST00000570510 JPT1Q9UK76 154 aa8.4□□□□□ -1.06
VPS53-207ENST00000570510 KIAA1109Q2LD37 5005 aa8.4□□□□□ -1.06
VPS53-207ENST00000570510 A0A0J9YWU9 116 aa8.39□□□□□ -1.07
VPS53-207ENST00000570510 A0A1W2PP11 408 aa8.39□□□□□ -1.07
VPS53-207ENST00000570510 IZUMO1RA6ND01 250 aa8.39□□□□□ -1.07
VPS53-207ENST00000570510 NOTOA8MTQ0 251 aa8.39□□□□□ -1.07
VPS53-207ENST00000570510 NAPSAO96009 420 aa8.39□□□□□ -1.07
VPS53-207ENST00000570510 TFAP2AP05549 437 aa8.39□□□□□ -1.07
VPS53-207ENST00000570510 PSMB9P28065 219 aa8.39□□□□□ -1.07
VPS53-207ENST00000570510 CX3CL1P78423 397 aa8.39□□□□□ -1.07
VPS53-207ENST00000570510 UNC119Q13432 240 aa8.39□□□□□ -1.07
VPS53-207ENST00000570510 RPEL1Q2QD12 228 aa8.39□□□□□ -1.07
VPS53-207ENST00000570510 MOGAT2Q3SYC2 334 aa8.39□□□□□ -1.07
VPS53-207ENST00000570510 LCE2DQ5TA82 110 aaPredicted RBP8.39□□□□□ -1.07
VPS53-207ENST00000570510 FAM71F2Q6NXP2 309 aa8.39□□□□□ -1.07
VPS53-207ENST00000570510 ZNF880Q6PDB4 577 aa8.39□□□□□ -1.07
VPS53-207ENST00000570510 LAX1Q8IWV1 398 aa8.39□□□□□ -1.07
VPS53-207ENST00000570510 PRR18Q8N4B5 295 aa8.39□□□□□ -1.07
VPS53-207ENST00000570510 OR10V1Q8NGI7 309 aa8.39□□□□□ -1.07
VPS53-207ENST00000570510 OR2K2Q8NGT1 345 aa8.39□□□□□ -1.07
VPS53-207ENST00000570510 GALMQ96C23 342 aa8.39□□□□□ -1.07
VPS53-207ENST00000570510 LPAR5Q9H1C0 372 aa8.39□□□□□ -1.07
VPS53-207ENST00000570510 BANF2Q9H503 90 aa8.39□□□□□ -1.07
VPS53-207ENST00000570510 ABRACLQ9P1F3 81 aa8.39□□□□□ -1.07
VPS53-207ENST00000570510 SLC23A1Q9UHI7 598 aa8.39□□□□□ -1.07
VPS53-207ENST00000570510 A0A0A6YYH2 397 aa8.38□□□□□ -1.07
VPS53-207ENST00000570510 A6NJ64 397 aa8.38□□□□□ -1.07
VPS53-207ENST00000570510 FOXI3A8MTJ6 420 aaPredicted RBP8.38□□□□□ -1.07
VPS53-207ENST00000570510 SLC31A2O15432 143 aa8.38□□□□□ -1.07
VPS53-207ENST00000570510 LANCL1O43813 399 aa8.38□□□□□ -1.07
VPS53-207ENST00000570510 YPEL1O60688 119 aa8.38□□□□□ -1.07
VPS53-207ENST00000570510 CD7P09564 240 aa8.38□□□□□ -1.07
VPS53-207ENST00000570510 GADD45AP24522 165 aa8.38□□□□□ -1.07
VPS53-207ENST00000570510 SERPINB10P48595 397 aa8.38□□□□□ -1.07
VPS53-207ENST00000570510 C2orf76Q3KRA6 126 aa8.38□□□□□ -1.07
VPS53-207ENST00000570510 AKIRIN2Q53H80 203 aa8.38□□□□□ -1.07
VPS53-207ENST00000570510 SLC16A13Q7RTY0 426 aa8.38□□□□□ -1.07
VPS53-207ENST00000570510 TMEM217Q8N7C4 229 aa8.38□□□□□ -1.07
VPS53-207ENST00000570510 LFNGQ8NES3 379 aa8.38□□□□□ -1.07
VPS53-207ENST00000570510 DYNLRB2Q8TF09 96 aa8.38□□□□□ -1.07
VPS53-207ENST00000570510 RITA1Q96K30 269 aa8.38□□□□□ -1.07
VPS53-207ENST00000570510 YPEL2Q96QA6 119 aa8.38□□□□□ -1.07
VPS53-207ENST00000570510 GFI1Q99684 422 aa8.38□□□□□ -1.07
VPS53-207ENST00000570510 OVOL2Q9BRP0 275 aa8.38□□□□□ -1.07
VPS53-207ENST00000570510 TXNL4BQ9NX01 149 aaKnown RBP8.38□□□□□ -1.07
VPS53-207ENST00000570510 AK6Q9Y3D8 172 aaKnown RBP8.38□□□□□ -1.07
VPS53-207ENST00000570510 FBXO7Q9Y3I1 522 aa8.38□□□□□ -1.07
VPS53-207ENST00000570510 NUBP2Q9Y5Y2 271 aa8.38□□□□□ -1.07
VPS53-207ENST00000570510 HBZP02008 142 aa8.37□□□□□ -1.07
VPS53-207ENST00000570510 CSN3P07498 182 aa8.37□□□□□ -1.07
VPS53-207ENST00000570510 CRIP2P52943 208 aaPredicted RBP8.37□□□□□ -1.07
VPS53-207ENST00000570510 HMGN3Q15651 99 aa8.37□□□□□ -1.07
VPS53-207ENST00000570510 CT45A1Q5HYN5 189 aa8.37□□□□□ -1.07
VPS53-207ENST00000570510 IL34Q6ZMJ4 242 aa8.37□□□□□ -1.07
VPS53-207ENST00000570510 Q6ZS49 121 aa8.37□□□□□ -1.07
VPS53-207ENST00000570510 LYG2Q86SG7 212 aa8.37□□□□□ -1.07
VPS53-207ENST00000570510 TSPAN14Q8NG11 270 aa8.37□□□□□ -1.07
VPS53-207ENST00000570510 NPBQ8NG41 125 aa8.37□□□□□ -1.07
VPS53-207ENST00000570510 CT45A3Q8NHU0 189 aa8.37□□□□□ -1.07
VPS53-207ENST00000570510 MRPL30Q8TCC3 161 aaKnown RBP8.37□□□□□ -1.07
VPS53-207ENST00000570510 FAM46BQ96A09 425 aa8.37□□□□□ -1.07
VPS53-207ENST00000570510 CLCC1Q96S66 551 aa8.37□□□□□ -1.07
VPS53-207ENST00000570510 FAM103A1Q9BTL3 118 aaKnown RBP8.37□□□□□ -1.07
VPS53-207ENST00000570510 WFDC10AQ9H1F0 79 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms