RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 FAM223AQ8IWN6 122 aa7.68□□□□□ -1.18
CTDNEP1-202ENST00000570380 ACBD7Q8N6N7 88 aa7.68□□□□□ -1.18
CTDNEP1-202ENST00000570380 UXS1Q8NBZ7 420 aa7.68□□□□□ -1.18
CTDNEP1-202ENST00000570380 IL1F10Q8WWZ1 152 aa7.68□□□□□ -1.18
CTDNEP1-202ENST00000570380 FAM46BQ96A09 425 aa7.68□□□□□ -1.18
CTDNEP1-202ENST00000570380 OR14A2Q96R54 314 aa7.68□□□□□ -1.18
CTDNEP1-202ENST00000570380 SULT4A1Q9BR01 284 aa7.68□□□□□ -1.18
CTDNEP1-202ENST00000570380 LRRC42Q9Y546 428 aa7.68□□□□□ -1.18
CTDNEP1-202ENST00000570380 FAM90A7PA6NKC0 464 aa7.67□□□□□ -1.18
CTDNEP1-202ENST00000570380 TUSC2O75896 110 aa7.67□□□□□ -1.18
CTDNEP1-202ENST00000570380 GLAP06280 429 aa7.67□□□□□ -1.18
CTDNEP1-202ENST00000570380 FUT3P21217 361 aa7.67□□□□□ -1.18
CTDNEP1-202ENST00000570380 BDKRB2P30411 391 aa7.67□□□□□ -1.18
CTDNEP1-202ENST00000570380 MFAP2P55001 183 aa7.67□□□□□ -1.18
CTDNEP1-202ENST00000570380 GPR176Q14439 515 aa7.67□□□□□ -1.18
CTDNEP1-202ENST00000570380 LHFPL3Q86UP9 236 aa7.67□□□□□ -1.18
CTDNEP1-202ENST00000570380 OR2C3Q8N628 320 aa7.67□□□□□ -1.18
CTDNEP1-202ENST00000570380 ZNF645Q8N7E2 425 aa7.67□□□□□ -1.18
CTDNEP1-202ENST00000570380 MAPKAPK5-AS1Q8N8E1 139 aa7.67□□□□□ -1.18
CTDNEP1-202ENST00000570380 OR1L6Q8NGR2 347 aa7.67□□□□□ -1.18
CTDNEP1-202ENST00000570380 ORAI1Q96D31 301 aa7.67□□□□□ -1.18
CTDNEP1-202ENST00000570380 PHB2Q99623 299 aa7.67□□□□□ -1.18
CTDNEP1-202ENST00000570380 ZNF184Q99676 751 aaPredicted RBP7.67□□□□□ -1.18
CTDNEP1-202ENST00000570380 BANF2Q9H503 90 aa7.67□□□□□ -1.18
CTDNEP1-202ENST00000570380 MAP6D1Q9H9H5 199 aa7.67□□□□□ -1.18
CTDNEP1-202ENST00000570380 APOBP04114 4563 aaKnown RBP7.66□□□□□ -1.18
CTDNEP1-202ENST00000570380 TRAV25A0A0B4J276 109 aa7.66□□□□□ -1.18
CTDNEP1-202ENST00000570380 A8MWP6 167 aa7.66□□□□□ -1.18
CTDNEP1-202ENST00000570380 M0R2N4 97 aa7.66□□□□□ -1.18
CTDNEP1-202ENST00000570380 ITGB1BP1O14713 200 aa7.66□□□□□ -1.18
CTDNEP1-202ENST00000570380 CD2P06729 351 aa7.66□□□□□ -1.18
CTDNEP1-202ENST00000570380 CALB2P22676 271 aa7.66□□□□□ -1.18
CTDNEP1-202ENST00000570380 GTF2A1P52655 376 aaPredicted RBP7.66□□□□□ -1.18
CTDNEP1-202ENST00000570380 PPP3R1P63098 170 aa7.66□□□□□ -1.18
CTDNEP1-202ENST00000570380 C15orf32Q32M92 178 aa7.66□□□□□ -1.18
CTDNEP1-202ENST00000570380 SLC25A30Q5SVS4 291 aa7.66□□□□□ -1.18
CTDNEP1-202ENST00000570380 GLIPR1L1Q6UWM5 242 aa7.66□□□□□ -1.18
CTDNEP1-202ENST00000570380 SYS1Q8N2H4 156 aa7.66□□□□□ -1.18
CTDNEP1-202ENST00000570380 CIB1Q99828 191 aa7.66□□□□□ -1.18
CTDNEP1-202ENST00000570380 RARRES2Q99969 163 aa7.66□□□□□ -1.18
CTDNEP1-202ENST00000570380 SELENOIQ9C0D9 397 aa7.66□□□□□ -1.18
CTDNEP1-202ENST00000570380 C11orf54Q9H0W9 315 aaPredicted RBP7.66□□□□□ -1.18
CTDNEP1-202ENST00000570380 C11orf68Q9H3H3 251 aaKnown RBP7.66□□□□□ -1.18
CTDNEP1-202ENST00000570380 ABRACLQ9P1F3 81 aa7.66□□□□□ -1.18
CTDNEP1-202ENST00000570380 EXOGQ9Y2C4 368 aaKnown RBP7.66□□□□□ -1.18
CTDNEP1-202ENST00000570380 EXOSC1Q9Y3B2 195 aaKnown RBP7.66□□□□□ -1.18
CTDNEP1-202ENST00000570380 ZNF320A2RRD8 509 aa7.65□□□□□ -1.18
CTDNEP1-202ENST00000570380 SRRM4A7MD48 611 aaKnown RBP7.65□□□□□ -1.18
CTDNEP1-202ENST00000570380 G3V2T6 193 aa7.65□□□□□ -1.18
CTDNEP1-202ENST00000570380 DEFB4AO15263 64 aa7.65□□□□□ -1.18
CTDNEP1-202ENST00000570380 PDCD6O75340 191 aa7.65□□□□□ -1.18
CTDNEP1-202ENST00000570380 OR2J3O76001 311 aa7.65□□□□□ -1.18
CTDNEP1-202ENST00000570380 S1PR2O95136 353 aa7.65□□□□□ -1.18
CTDNEP1-202ENST00000570380 APOA2P02652 100 aa7.65□□□□□ -1.18
CTDNEP1-202ENST00000570380 MGMTP16455 207 aa7.65□□□□□ -1.18
CTDNEP1-202ENST00000570380 ODF3L2Q3SX64 289 aa7.65□□□□□ -1.18
CTDNEP1-202ENST00000570380 TMEM177Q53S58 311 aa7.65□□□□□ -1.18
CTDNEP1-202ENST00000570380 RBPMS2Q6ZRY4 209 aaKnown RBP7.65□□□□□ -1.18
CTDNEP1-202ENST00000570380 SPATA24Q86W54 205 aa7.65□□□□□ -1.18
CTDNEP1-202ENST00000570380 NECAP1Q8NC96 275 aa7.65□□□□□ -1.18
CTDNEP1-202ENST00000570380 GPR148Q8TDV2 347 aa7.65□□□□□ -1.18
CTDNEP1-202ENST00000570380 MUL1Q969V5 352 aa7.65□□□□□ -1.18
CTDNEP1-202ENST00000570380 Q96M66 194 aa7.65□□□□□ -1.18
CTDNEP1-202ENST00000570380 TCRBV3S1A0A5B6 114 aa7.64□□□□□ -1.19
CTDNEP1-202ENST00000570380 MPPED1O15442 326 aa7.64□□□□□ -1.19
CTDNEP1-202ENST00000570380 CDK2AP2O75956 126 aa7.64□□□□□ -1.19
CTDNEP1-202ENST00000570380 IGHV3-23P01764 117 aa7.64□□□□□ -1.19
CTDNEP1-202ENST00000570380 C8orf88P0DMB2 117 aa7.64□□□□□ -1.19
CTDNEP1-202ENST00000570380 IGFBP3P17936 291 aaPredicted RBP7.64□□□□□ -1.19
CTDNEP1-202ENST00000570380 CAPGP40121 348 aa7.64□□□□□ -1.19
CTDNEP1-202ENST00000570380 CEACAM6P40199 344 aa7.64□□□□□ -1.19
CTDNEP1-202ENST00000570380 FAM209BQ5JX69 171 aa7.64□□□□□ -1.19
CTDNEP1-202ENST00000570380 SLC38A6Q8IZM9 456 aa7.64□□□□□ -1.19
CTDNEP1-202ENST00000570380 SVOPQ8N4V2 548 aa7.64□□□□□ -1.19
CTDNEP1-202ENST00000570380 OR11H2Q8NH07 326 aa7.64□□□□□ -1.19
CTDNEP1-202ENST00000570380 SRSF12Q8WXF0 261 aaKnown RBP7.64□□□□□ -1.19
CTDNEP1-202ENST00000570380 SLC7A6OSQ96CW6 309 aaPredicted RBP7.64□□□□□ -1.19
CTDNEP1-202ENST00000570380 LGALS12Q96DT0 336 aa7.64□□□□□ -1.19
CTDNEP1-202ENST00000570380 GALNT14Q96FL9 552 aa7.64□□□□□ -1.19
CTDNEP1-202ENST00000570380 MRPL48Q96GC5 212 aaKnown RBP7.64□□□□□ -1.19
CTDNEP1-202ENST00000570380 GABARAPL1Q9H0R8 117 aa7.64□□□□□ -1.19
CTDNEP1-202ENST00000570380 SLC35D1Q9NTN3 355 aa7.64□□□□□ -1.19
CTDNEP1-202ENST00000570380 OR1A1Q9P1Q5 309 aa7.64□□□□□ -1.19
CTDNEP1-202ENST00000570380 AGRNO00468 2067 aa7.63□□□□□ -1.19
CTDNEP1-202ENST00000570380 IGHV4-4A0A075B6R2 117 aa7.63□□□□□ -1.19
CTDNEP1-202ENST00000570380 C11orf94C9JXX5 98 aa7.63□□□□□ -1.19
CTDNEP1-202ENST00000570380 ARL3P36405 182 aa7.63□□□□□ -1.19
CTDNEP1-202ENST00000570380 MAP2K4P45985 399 aa7.63□□□□□ -1.19
CTDNEP1-202ENST00000570380 GBX2P52951 348 aaPredicted RBP7.63□□□□□ -1.19
CTDNEP1-202ENST00000570380 MRPL28Q13084 256 aaKnown RBP7.63□□□□□ -1.19
CTDNEP1-202ENST00000570380 TNXAQ16473 311 aa7.63□□□□□ -1.19
CTDNEP1-202ENST00000570380 FAM106AQ4KMX7 169 aa7.63□□□□□ -1.19
CTDNEP1-202ENST00000570380 ZNF585BQ52M93 769 aa7.63□□□□□ -1.19
CTDNEP1-202ENST00000570380 AWAT2Q6E213 333 aa7.63□□□□□ -1.19
CTDNEP1-202ENST00000570380 XAF1Q6GPH4 301 aa7.63□□□□□ -1.19
CTDNEP1-202ENST00000570380 OR4A47Q6IF82 309 aa7.63□□□□□ -1.19
CTDNEP1-202ENST00000570380 ZNF880Q6PDB4 577 aa7.63□□□□□ -1.19
CTDNEP1-202ENST00000570380 CLEC19AQ6UXS0 136 aa7.63□□□□□ -1.19
CTDNEP1-202ENST00000570380 TTC9CQ8N5M4 171 aa7.63□□□□□ -1.19
CTDNEP1-202ENST00000570380 POM121L12Q8N7R1 296 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms