RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 KLF2Q9Y5W3 355 aaPredicted RBP5.76□□□□□ -1.49
CNOT1-222ENST00000570139 SVILO95425 2214 aa5.75□□□□□ -1.49
CNOT1-222ENST00000570139 FASNP49327 2511 aaKnown RBP5.75□□□□□ -1.49
CNOT1-222ENST00000570139 IGSF10Q6WRI0 2623 aa5.75□□□□□ -1.49
CNOT1-222ENST00000570139 USP24Q9UPU5 2620 aa5.75□□□□□ -1.49
CNOT1-222ENST00000570139 TRBV6-6A0A0A6YYG2 114 aa5.75□□□□□ -1.49
CNOT1-222ENST00000570139 KIR2DS1A0A191URI9 304 aa5.75□□□□□ -1.49
CNOT1-222ENST00000570139 MEIOCA2RUB1 952 aa5.75□□□□□ -1.49
CNOT1-222ENST00000570139 DNAJC9-AS1A6NH13 148 aa5.75□□□□□ -1.49
CNOT1-222ENST00000570139 SRRM5B3KS81 715 aa5.75□□□□□ -1.49
CNOT1-222ENST00000570139 H0YL77 283 aa5.75□□□□□ -1.49
CNOT1-222ENST00000570139 SYNGR1O43759 233 aa5.75□□□□□ -1.49
CNOT1-222ENST00000570139 CIDEAO60543 219 aa5.75□□□□□ -1.49
CNOT1-222ENST00000570139 RAB3DO95716 219 aa5.75□□□□□ -1.49
CNOT1-222ENST00000570139 IGHV1-46P01743 117 aa5.75□□□□□ -1.49
CNOT1-222ENST00000570139 IFNA6P05013 189 aa5.75□□□□□ -1.49
CNOT1-222ENST00000570139 KIR2DS4P43632 304 aa5.75□□□□□ -1.49
CNOT1-222ENST00000570139 UQCRFS1P47985 274 aa5.75□□□□□ -1.49
CNOT1-222ENST00000570139 NPBWR2P48146 333 aa5.75□□□□□ -1.49
CNOT1-222ENST00000570139 SNRPD2P62316 118 aaKnown RBP5.75□□□□□ -1.49
CNOT1-222ENST00000570139 TNFAIP6P98066 277 aaPredicted RBP5.75□□□□□ -1.49
CNOT1-222ENST00000570139 PAX5Q02548 391 aa5.75□□□□□ -1.49
CNOT1-222ENST00000570139 MADCAM1Q13477 382 aa5.75□□□□□ -1.49
CNOT1-222ENST00000570139 KIR2DS1Q14954 304 aa5.75□□□□□ -1.49
CNOT1-222ENST00000570139 ALKBH6Q3KRA9 238 aa5.75□□□□□ -1.49
CNOT1-222ENST00000570139 PIGYQ3MUY2 71 aa5.75□□□□□ -1.49
CNOT1-222ENST00000570139 ZNF672Q499Z4 452 aaPredicted RBP5.75□□□□□ -1.49
CNOT1-222ENST00000570139 TMEM255AQ5JRV8 349 aa5.75□□□□□ -1.49
CNOT1-222ENST00000570139 ATAD3CQ5T2N8 411 aa5.75□□□□□ -1.49
CNOT1-222ENST00000570139 WDR82Q6UXN9 313 aa5.75□□□□□ -1.49
CNOT1-222ENST00000570139 WDR86Q86TI4 376 aa5.75□□□□□ -1.49
CNOT1-222ENST00000570139 LRP11Q86VZ4 500 aa5.75□□□□□ -1.49
CNOT1-222ENST00000570139 STPG4Q8N801 248 aa5.75□□□□□ -1.49
CNOT1-222ENST00000570139 OR6F1Q8NGZ6 308 aa5.75□□□□□ -1.49
CNOT1-222ENST00000570139 NUDCD2Q8WVJ2 157 aa5.75□□□□□ -1.49
CNOT1-222ENST00000570139 ZNF479Q96JC4 524 aa5.75□□□□□ -1.49
CNOT1-222ENST00000570139 SCGB3A2Q96PL1 93 aa5.75□□□□□ -1.49
CNOT1-222ENST00000570139 OR2V2Q96R30 315 aa5.75□□□□□ -1.49
CNOT1-222ENST00000570139 CMSS1Q9BQ75 279 aaKnown RBP5.75□□□□□ -1.49
CNOT1-222ENST00000570139 DNTTIP1Q9H147 329 aa5.75□□□□□ -1.49
CNOT1-222ENST00000570139 ZNF286AQ9HBT8 521 aa5.75□□□□□ -1.49
CNOT1-222ENST00000570139 HRASLSQ9HDD0 168 aa5.75□□□□□ -1.49
CNOT1-222ENST00000570139 DYNLRB1Q9NP97 96 aa5.75□□□□□ -1.49
CNOT1-222ENST00000570139 MCUBQ9NWR8 336 aa5.75□□□□□ -1.49
CNOT1-222ENST00000570139 HCFC1P51610 2035 aa5.75□□□□□ -1.49
CNOT1-222ENST00000570139 LINC00854A0A1B0GVQ3 168 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 DEGS1O15121 323 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 ZG16O60844 167 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 RHBDL1O75783 438 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 NDUFB6O95139 128 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 FSTL3O95633 263 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 HAND1O96004 215 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 CD3DP04234 171 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 TCRBP04435 133 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 CSN2P05814 226 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 CTXN2P0C2S0 81 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 TRAPPC2P0DI81 140 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 TRAPPC2BP0DI82 140 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 MUC1P15941 1255 aaPredicted RBP5.74□□□□□ -1.49
CNOT1-222ENST00000570139 HNF1AP20823 631 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 BTCP35070 178 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 ARPC4P59998 168 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 RPL23AP62750 156 aaKnown RBP5.74□□□□□ -1.49
CNOT1-222ENST00000570139 PJVKQ0ZLH3 352 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 RIGQ13278 110 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 CDK10Q15131 360 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 SURF2Q15527 256 aaPredicted RBP5.74□□□□□ -1.49
CNOT1-222ENST00000570139 GRK1Q15835 563 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 KCNJ8Q15842 424 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 KIAA1644Q3SXP7 199 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 CHRFAM7AQ494W8 412 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 LINC01620Q4KN68 170 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 DMRTC1Q5HYR2 192 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 RSBN1Q5VWQ0 802 aaPredicted RBP5.74□□□□□ -1.49
CNOT1-222ENST00000570139 ACP7Q6ZNF0 438 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 C6orf201Q7Z4U5 140 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 TRPT1Q86TN4 253 aaKnown RBP5.74□□□□□ -1.49
CNOT1-222ENST00000570139 C11orf53Q8IXP5 236 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 MUC15Q8N387 334 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 ZDHHC22Q8N966 263 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 BEST4Q8NFU0 473 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 OR5AP2Q8NGF4 316 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 OR4C16Q8NGL9 310 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 OR5H2Q8NGV7 314 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 OR4K15Q8NH41 348 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 LINC01560Q8TB33 94 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 PIK3IP1Q96FE7 263 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 C20orf85Q9H1P6 137 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 NECAP2Q9NVZ3 263 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 RNF7Q9UBF6 113 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 AK3Q9UIJ7 227 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 ANXA10Q9UJ72 324 aa5.74□□□□□ -1.49
CNOT1-222ENST00000570139 FUOMA2VDF0 154 aa5.73□□□□□ -1.49
CNOT1-222ENST00000570139 FBLL1A6NHQ2 334 aaKnown RBP5.73□□□□□ -1.49
CNOT1-222ENST00000570139 CEACAM18A8MTB9 384 aa5.73□□□□□ -1.49
CNOT1-222ENST00000570139 DEFB108AA8MXU0 73 aa5.73□□□□□ -1.49
CNOT1-222ENST00000570139 E7EQL1 145 aa5.73□□□□□ -1.49
CNOT1-222ENST00000570139 INMT-MINDY4F8WBC2 141 aa5.73□□□□□ -1.49
CNOT1-222ENST00000570139 NAPSAO96009 420 aa5.73□□□□□ -1.49
CNOT1-222ENST00000570139 LHBP01229 141 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms