RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 IL13RA2Q14627 380 aa4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 USF2Q15853 346 aaPredicted RBP4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 LY6G6FQ5SQ64 297 aa4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 SLC25A30Q5SVS4 291 aa4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 BCL2L15Q5TBC7 163 aa4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 GLT8D1Q68CQ7 371 aa4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 AQP12AQ8IXF9 295 aa4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 CSNK1G2-AS1Q8NCQ2 148 aa4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 CCDC54Q8NEL0 328 aa4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 OR52L2PQ8NGH6 319 aa4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 OR5AN1Q8NGI8 311 aa4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 CANT1Q8WVQ1 401 aa4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 SPSB1Q96BD6 273 aa4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 MRPS24Q96EL2 167 aaKnown RBP4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 DPCDQ9BVM2 203 aaPredicted RBP4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 FNDC4Q9H6D8 234 aaPredicted RBP4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 REEP1Q9H902 201 aa4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 IL1RAPQ9NPH3 570 aa4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 CMC2Q9NRP2 79 aa4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 TMEM14BQ9NUH8 114 aa4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 OR52A1Q9UKL2 312 aa4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 UFC1Q9Y3C8 167 aa4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 LINC00588Q9Y4M8 146 aa4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 SNX5Q9Y5X3 404 aa4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 R4GMQ9 66 aa4.6□□□□□ -1.67
HERPUD1-217ENST00000569429 A0A0U1RQV1 116 aa4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 RIIAD1A6NNX1 92 aa4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 H3BNX3 289 aa4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 H7C2Y5 167 aa4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 SYT7O43581 403 aa4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 KRT36O76013 467 aa4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 CCNB2O95067 398 aa4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 BAG2O95816 211 aa4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 SCGB1D2O95969 90 aa4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 PRH1P02810 166 aa4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 CTSDP07339 412 aaPredicted RBP4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 RAP2AP10114 183 aa4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 ATF1P18846 271 aa4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 HCCSP53701 268 aa4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 HTD2P86397 168 aa4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 PJVKQ0ZLH3 352 aa4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 OXA1LQ15070 435 aa4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 RNASE12Q5GAN4 147 aaKnown RBP4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 ELP2Q6IA86 826 aa4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 OR2T5Q6IEZ7 315 aa4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 CLEC19AQ6UXS0 136 aa4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 UTS2BQ765I0 119 aa4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 SUMF2Q8NBJ7 301 aa4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 OR2T29Q8NH02 315 aa4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 CCDC107Q8WV48 283 aa4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 RFT1Q96AA3 541 aa4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 C7orf34Q96L11 122 aa4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 OPALINQ96PE5 141 aa4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 NR1H4Q96RI1 486 aaPredicted RBP4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 TSSK6Q9BXA6 273 aa4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 YIPF3Q9GZM5 350 aa4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 OR51V1Q9H2C8 321 aa4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 MAGIXQ9H6Y5 334 aa4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 ZNF556Q9HAH1 456 aa4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 OR2S2Q9NQN1 319 aa4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 ING4Q9UNL4 249 aa4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 GTF2A1LQ9UNN4 478 aa4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 SAMHD1Q9Y3Z3 626 aaKnown RBP4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 AP4S1Q9Y587 144 aa4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 ETV7Q9Y603 341 aa4.59□□□□□ -1.67
HERPUD1-217ENST00000569429 TRBV5-7A0A0A0MS05 114 aa4.58□□□□□ -1.68
HERPUD1-217ENST00000569429 TEX48A0A1B0GUV7 120 aa4.58□□□□□ -1.68
HERPUD1-217ENST00000569429 TCRBV5S2A0A599 114 aa4.58□□□□□ -1.68
HERPUD1-217ENST00000569429 RGS13O14921 159 aa4.58□□□□□ -1.68
HERPUD1-217ENST00000569429 FKBP6O75344 327 aa4.58□□□□□ -1.68
HERPUD1-217ENST00000569429 OR2J3O76001 311 aa4.58□□□□□ -1.68
HERPUD1-217ENST00000569429 SOX14O95416 240 aa4.58□□□□□ -1.68
HERPUD1-217ENST00000569429 GASTP01350 101 aa4.58□□□□□ -1.68
HERPUD1-217ENST00000569429 HBZP02008 142 aa4.58□□□□□ -1.68
HERPUD1-217ENST00000569429 MT-ND4P03905 459 aa4.58□□□□□ -1.68
HERPUD1-217ENST00000569429 REG1AP05451 166 aa4.58□□□□□ -1.68
HERPUD1-217ENST00000569429 CRYGBP07316 175 aa4.58□□□□□ -1.68
HERPUD1-217ENST00000569429 APELAP0DMC3 54 aa4.58□□□□□ -1.68
HERPUD1-217ENST00000569429 SPP1P10451 314 aa4.58□□□□□ -1.68
HERPUD1-217ENST00000569429 PRKACGP22612 351 aa4.58□□□□□ -1.68
HERPUD1-217ENST00000569429 PSMB6P28072 239 aa4.58□□□□□ -1.68
HERPUD1-217ENST00000569429 SUMO1P63165 101 aaKnown RBP4.58□□□□□ -1.68
HERPUD1-217ENST00000569429 ZNF529Q6P280 563 aa4.58□□□□□ -1.68
HERPUD1-217ENST00000569429 GLDNQ6ZMI3 551 aaPredicted RBP4.58□□□□□ -1.68
HERPUD1-217ENST00000569429 RASSF6Q6ZTQ3 369 aa4.58□□□□□ -1.68
HERPUD1-217ENST00000569429 ADGRG5Q8IZF4 528 aa4.58□□□□□ -1.68
HERPUD1-217ENST00000569429 OR2T33Q8NG76 320 aa4.58□□□□□ -1.68
HERPUD1-217ENST00000569429 OR5D18Q8NGL1 313 aa4.58□□□□□ -1.68
HERPUD1-217ENST00000569429 GIPC3Q8TF64 312 aa4.58□□□□□ -1.68
HERPUD1-217ENST00000569429 PYDC1Q8WXC3 89 aa4.58□□□□□ -1.68
HERPUD1-217ENST00000569429 ASB17Q8WXJ9 295 aa4.58□□□□□ -1.68
HERPUD1-217ENST00000569429 PHB2Q99623 299 aa4.58□□□□□ -1.68
HERPUD1-217ENST00000569429 NIPSNAP3BQ9BS92 247 aa4.58□□□□□ -1.68
HERPUD1-217ENST00000569429 MAGT1Q9H0U3 335 aa4.58□□□□□ -1.68
HERPUD1-217ENST00000569429 IFT22Q9H7X7 185 aa4.58□□□□□ -1.68
HERPUD1-217ENST00000569429 Q9N2K0 584 aa4.58□□□□□ -1.68
HERPUD1-217ENST00000569429 SMPD3Q9NY59 655 aaPredicted RBP4.58□□□□□ -1.68
HERPUD1-217ENST00000569429 A0A087WTM6 91 aa4.57□□□□□ -1.68
HERPUD1-217ENST00000569429 TMEM189A5PLL7 270 aa4.57□□□□□ -1.68
HERPUD1-217ENST00000569429 G3V2T6 193 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms