RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 OR2Z1Q8NG97 314 aa7.36□□□□□ -1.23
LINC00558-201ENST00000569422 SCGB1C1Q8TD33 95 aa7.36□□□□□ -1.23
LINC00558-201ENST00000569422 GALMQ96C23 342 aa7.36□□□□□ -1.23
LINC00558-201ENST00000569422 C11orf1Q9H5F2 150 aa7.36□□□□□ -1.23
LINC00558-201ENST00000569422 GNG13Q9P2W3 67 aa7.36□□□□□ -1.23
LINC00558-201ENST00000569422 CLCF1Q9UBD9 225 aa7.36□□□□□ -1.23
LINC00558-201ENST00000569422 RNF115Q9Y4L5 304 aa7.36□□□□□ -1.23
LINC00558-201ENST00000569422 RBFOX3A6NFN3 312 aa7.36□□□□□ -1.23
LINC00558-201ENST00000569422 OR5H1A6NKK0 313 aa7.36□□□□□ -1.23
LINC00558-201ENST00000569422 C12orf77C9JDV5 145 aa7.36□□□□□ -1.23
LINC00558-201ENST00000569422 IFNA4P05014 189 aa7.36□□□□□ -1.23
LINC00558-201ENST00000569422 RAB5CP51148 216 aa7.36□□□□□ -1.23
LINC00558-201ENST00000569422 ZNF83P51522 516 aa7.36□□□□□ -1.23
LINC00558-201ENST00000569422 ZNF585BQ52M93 769 aa7.36□□□□□ -1.23
LINC00558-201ENST00000569422 RPRMLQ8N4K4 120 aa7.36□□□□□ -1.23
LINC00558-201ENST00000569422 LYPD6BQ8NI32 183 aa7.36□□□□□ -1.23
LINC00558-201ENST00000569422 PFDN5Q99471 154 aa7.36□□□□□ -1.23
LINC00558-201ENST00000569422 ATP5SQ99766 215 aa7.36□□□□□ -1.23
LINC00558-201ENST00000569422 IGHV3OR15-7A0A075B7D8 119 aa7.36□□□□□ -1.23
LINC00558-201ENST00000569422 KIAA1324LA8MWY0 1029 aaPredicted RBP7.36□□□□□ -1.23
LINC00558-201ENST00000569422 TNFRSF6BO95407 300 aa7.36□□□□□ -1.23
LINC00558-201ENST00000569422 HBZP02008 142 aa7.36□□□□□ -1.23
LINC00558-201ENST00000569422 HEXAP06865 529 aa7.36□□□□□ -1.23
LINC00558-201ENST00000569422 CD55P08174 381 aa7.36□□□□□ -1.23
LINC00558-201ENST00000569422 NUTF2P61970 127 aaKnown RBP7.36□□□□□ -1.23
LINC00558-201ENST00000569422 RPL30P62888 115 aaKnown RBP7.36□□□□□ -1.23
LINC00558-201ENST00000569422 SRSF7Q16629 238 aaKnown RBP eCLIP7.36□□□□□ -1.23
LINC00558-201ENST00000569422 LRP11Q86VZ4 500 aa7.36□□□□□ -1.23
LINC00558-201ENST00000569422 TCTEX1D2Q8WW35 142 aa7.36□□□□□ -1.23
LINC00558-201ENST00000569422 S100PBPQ96BU1 408 aa7.36□□□□□ -1.23
LINC00558-201ENST00000569422 SCRT1Q9BWW7 348 aa7.36□□□□□ -1.23
LINC00558-201ENST00000569422 NIT2Q9NQR4 276 aa7.36□□□□□ -1.23
LINC00558-201ENST00000569422 A0A1B0GU03 582 aa7.35□□□□□ -1.23
LINC00558-201ENST00000569422 A0A1W2PPQ1 181 aa7.35□□□□□ -1.23
LINC00558-201ENST00000569422 ZNF891A8MT65 544 aaPredicted RBP7.35□□□□□ -1.23
LINC00558-201ENST00000569422 SULT1A1P50225 295 aa7.35□□□□□ -1.23
LINC00558-201ENST00000569422 ERVK11-1P61568 191 aa7.35□□□□□ -1.23
LINC00558-201ENST00000569422 COL10A1Q03692 680 aa7.35□□□□□ -1.23
LINC00558-201ENST00000569422 INO80CQ6PI98 192 aaPredicted RBP7.35□□□□□ -1.23
LINC00558-201ENST00000569422 Q8IYB0 196 aa7.35□□□□□ -1.23
LINC00558-201ENST00000569422 WDR31Q8NA23 367 aa7.35□□□□□ -1.23
LINC00558-201ENST00000569422 OR8G5Q8NG78 346 aa7.35□□□□□ -1.23
LINC00558-201ENST00000569422 CABLES2Q9BTV7 478 aa7.35□□□□□ -1.23
LINC00558-201ENST00000569422 TRAV17A0A0B4J275 112 aa7.35□□□□□ -1.23
LINC00558-201ENST00000569422 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.35□□□□□ -1.23
LINC00558-201ENST00000569422 IQCF6A8MYZ5 107 aa7.35□□□□□ -1.23
LINC00558-201ENST00000569422 SCGB1D1O95968 90 aa7.35□□□□□ -1.23
LINC00558-201ENST00000569422 MRPS11P82912 194 aaKnown RBP7.35□□□□□ -1.23
LINC00558-201ENST00000569422 ZNF880Q6PDB4 577 aa7.35□□□□□ -1.23
LINC00558-201ENST00000569422 SPSB3Q6PJ21 355 aa7.35□□□□□ -1.23
LINC00558-201ENST00000569422 ZNF295-AS1Q8N0V1 137 aa7.35□□□□□ -1.23
LINC00558-201ENST00000569422 CYB561D1Q8N8Q1 229 aa7.35□□□□□ -1.23
LINC00558-201ENST00000569422 HIST1H2BAQ96A08 127 aa7.35□□□□□ -1.23
LINC00558-201ENST00000569422 SARAFQ96BY9 339 aa7.35□□□□□ -1.23
LINC00558-201ENST00000569422 TAAR6Q96RI8 345 aa7.35□□□□□ -1.23
LINC00558-201ENST00000569422 LIN7CQ9NUP9 197 aaKnown RBP7.35□□□□□ -1.23
LINC00558-201ENST00000569422 CLN8Q9UBY8 286 aa7.35□□□□□ -1.23
LINC00558-201ENST00000569422 PSG11Q9UQ72 335 aa7.35□□□□□ -1.23
LINC00558-201ENST00000569422 MMP24Q9Y5R2 645 aa7.35□□□□□ -1.23
LINC00558-201ENST00000569422 UBE2L5PA0A1B0GUS4 154 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 TMEM30CPA0ZSE6 113 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 M0R1B8 84 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 MDH2P40926 338 aaKnown RBP7.34□□□□□ -1.23
LINC00558-201ENST00000569422 SCGB2A2Q13296 93 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 ZNF146Q15072 292 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 FAM201AQ5SY85 155 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 RNF152Q8N8N0 203 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 OR13A1Q8NGR1 328 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 LRRC29Q8WV35 223 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 GNPNAT1Q96EK6 184 aaPredicted RBP7.34□□□□□ -1.23
LINC00558-201ENST00000569422 DIRC2Q96SL1 478 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 TRBV6-6A0A0A6YYG2 114 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 C17orf98A8MV24 154 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 C1orf196B1AJZ1 125 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 S1PR2O95136 353 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 EDDM3BP56851 147 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 WDR82Q6UXN9 313 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 C11orf53Q8IXP5 236 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 ZDHHC16Q969W1 377 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 COQ2Q96H96 371 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 HINT2Q9BX68 163 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 BIN3Q9NQY0 253 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 RPRMQ9NS64 109 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 PROCRQ9UNN8 238 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 TNRC6AQ8NDV7 1962 aaKnown RBP7.34□□□□□ -1.23
LINC00558-201ENST00000569422 A0A1W2PPE3 182 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 DUXBA0A1W2PPF3 345 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 CLEC18AA5D8T8 446 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 SPRY3O43610 288 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 S100A8P05109 93 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 TAS2R30P59541 319 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 RAB5BP61020 215 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 RAB11AP62491 216 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 BAXQ07812 192 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 ZNF718Q3SXZ3 478 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 SPRNQ5BIV9 151 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 COMMD1Q8N668 190 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 CLEC18CQ8NCF0 446 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 RAB24Q969Q5 203 aa7.34□□□□□ -1.23
LINC00558-201ENST00000569422 RAB40CQ96S21 281 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms