RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 PLGLAQ15195 96 aa4.35□□□□□ -1.71
CDH13-212ENST00000569144 RCN1Q15293 331 aa4.35□□□□□ -1.71
CDH13-212ENST00000569144 DEFB135Q30KP9 77 aa4.35□□□□□ -1.71
CDH13-212ENST00000569144 TP53I3Q53FA7 332 aa4.35□□□□□ -1.71
CDH13-212ENST00000569144 MEDAGQ5VYS4 303 aa4.35□□□□□ -1.71
CDH13-212ENST00000569144 ELP2Q6IA86 826 aa4.35□□□□□ -1.71
CDH13-212ENST00000569144 ZNF343Q6P1L6 599 aa4.35□□□□□ -1.71
CDH13-212ENST00000569144 PRSS35Q8N3Z0 413 aa4.35□□□□□ -1.71
CDH13-212ENST00000569144 UBALD1Q8TB05 177 aa4.35□□□□□ -1.71
CDH13-212ENST00000569144 APH1BQ8WW43 257 aa4.35□□□□□ -1.71
CDH13-212ENST00000569144 LGALS12Q96DT0 336 aa4.35□□□□□ -1.71
CDH13-212ENST00000569144 NR1H4Q96RI1 486 aaPredicted RBP4.35□□□□□ -1.71
CDH13-212ENST00000569144 FAM103A1Q9BTL3 118 aaKnown RBP4.35□□□□□ -1.71
CDH13-212ENST00000569144 MRPL20Q9BYC9 149 aaKnown RBP4.35□□□□□ -1.71
CDH13-212ENST00000569144 MFFQ9GZY8 342 aa4.35□□□□□ -1.71
CDH13-212ENST00000569144 RAB9BQ9NP90 201 aa4.35□□□□□ -1.71
CDH13-212ENST00000569144 ZNF355PQ9NSJ1 428 aa4.35□□□□□ -1.71
CDH13-212ENST00000569144 SMPD3Q9NY59 655 aaPredicted RBP4.35□□□□□ -1.71
CDH13-212ENST00000569144 TECRQ9NZ01 308 aaKnown RBP4.35□□□□□ -1.71
CDH13-212ENST00000569144 GNG12Q9UBI6 72 aa4.35□□□□□ -1.71
CDH13-212ENST00000569144 APLNQ9ULZ1 77 aa4.35□□□□□ -1.71
CDH13-212ENST00000569144 GAB2Q9UQC2 676 aa4.35□□□□□ -1.71
CDH13-212ENST00000569144 EXOGQ9Y2C4 368 aaKnown RBP4.35□□□□□ -1.71
CDH13-212ENST00000569144 A0A0B4J203 849 aa4.34□□□□□ -1.71
CDH13-212ENST00000569144 ANKRD65E5RJM6 399 aa4.34□□□□□ -1.71
CDH13-212ENST00000569144 FCN1O00602 326 aa4.34□□□□□ -1.71
CDH13-212ENST00000569144 UBE2CO00762 179 aa4.34□□□□□ -1.71
CDH13-212ENST00000569144 CASQ2O14958 399 aaPredicted RBP4.34□□□□□ -1.71
CDH13-212ENST00000569144 SPINT2O43291 252 aa4.34□□□□□ -1.71
CDH13-212ENST00000569144 TRBV12-3P01733 135 aa4.34□□□□□ -1.71
CDH13-212ENST00000569144 TMEM225BP0DP42 221 aa4.34□□□□□ -1.71
CDH13-212ENST00000569144 ATP6V1E1P36543 226 aa4.34□□□□□ -1.71
CDH13-212ENST00000569144 RBMS2Q15434 407 aaKnown RBP4.34□□□□□ -1.71
CDH13-212ENST00000569144 TMEM244Q5VVB8 128 aa4.34□□□□□ -1.71
CDH13-212ENST00000569144 LPCAT4Q643R3 524 aa4.34□□□□□ -1.71
CDH13-212ENST00000569144 ZNF562Q6V9R5 426 aa4.34□□□□□ -1.71
CDH13-212ENST00000569144 FAM220AQ7Z4H9 259 aa4.34□□□□□ -1.71
CDH13-212ENST00000569144 ODF3L1Q8IXM7 274 aa4.34□□□□□ -1.71
CDH13-212ENST00000569144 ACBD7Q8N6N7 88 aa4.34□□□□□ -1.71
CDH13-212ENST00000569144 PACRGLQ8N7B6 248 aa4.34□□□□□ -1.71
CDH13-212ENST00000569144 SUMF2Q8NBJ7 301 aa4.34□□□□□ -1.71
CDH13-212ENST00000569144 PXT1Q8NFP0 134 aa4.34□□□□□ -1.71
CDH13-212ENST00000569144 OR10V1Q8NGI7 309 aa4.34□□□□□ -1.71
CDH13-212ENST00000569144 OR52I1Q8NGK6 324 aa4.34□□□□□ -1.71
CDH13-212ENST00000569144 OR13C9Q8NGT0 318 aa4.34□□□□□ -1.71
CDH13-212ENST00000569144 OR2G2Q8NGZ5 317 aa4.34□□□□□ -1.71
CDH13-212ENST00000569144 SNAPC3Q92966 411 aa4.34□□□□□ -1.71
CDH13-212ENST00000569144 FGGYQ96C11 551 aa4.34□□□□□ -1.71
CDH13-212ENST00000569144 PELI1Q96FA3 418 aa4.34□□□□□ -1.71
CDH13-212ENST00000569144 AMBNQ9NP70 447 aa4.34□□□□□ -1.71
CDH13-212ENST00000569144 C8orf4Q9NR00 106 aa4.34□□□□□ -1.71
CDH13-212ENST00000569144 GNG8Q9UK08 70 aa4.34□□□□□ -1.71
CDH13-212ENST00000569144 UBR4Q5T4S7 5183 aa4.33□□□□□ -1.72
CDH13-212ENST00000569144 LRP1BQ9NZR2 4599 aa4.33□□□□□ -1.72
CDH13-212ENST00000569144 DAPL1A0PJW8 107 aa4.33□□□□□ -1.72
CDH13-212ENST00000569144 SNTNA6NMZ2 147 aa4.33□□□□□ -1.72
CDH13-212ENST00000569144 OR4C45A6NMZ5 311 aa4.33□□□□□ -1.72
CDH13-212ENST00000569144 FADS2O95864 444 aaKnown RBP4.33□□□□□ -1.72
CDH13-212ENST00000569144 CA2P00918 260 aa4.33□□□□□ -1.72
CDH13-212ENST00000569144 LIMS3P0CW19 117 aa4.33□□□□□ -1.72
CDH13-212ENST00000569144 LIMS4P0CW20 117 aa4.33□□□□□ -1.72
CDH13-212ENST00000569144 TIRAPP58753 221 aa4.33□□□□□ -1.72
CDH13-212ENST00000569144 NANOS2P60321 138 aaKnown RBP4.33□□□□□ -1.72
CDH13-212ENST00000569144 SUMO2P61956 95 aaKnown RBP4.33□□□□□ -1.72
CDH13-212ENST00000569144 ADARB1P78563 741 aaKnown RBP4.33□□□□□ -1.72
CDH13-212ENST00000569144 KISS1Q15726 138 aa4.33□□□□□ -1.72
CDH13-212ENST00000569144 ANKRD55Q3KP44 614 aa4.33□□□□□ -1.72
CDH13-212ENST00000569144 PIGYQ3MUY2 71 aa4.33□□□□□ -1.72
CDH13-212ENST00000569144 OGFRL1Q5TC84 451 aaPredicted RBP4.33□□□□□ -1.72
CDH13-212ENST00000569144 ZNF691Q5VV52 312 aa4.33□□□□□ -1.72
CDH13-212ENST00000569144 ZNF833PQ6ZTB9 187 aa4.33□□□□□ -1.72
CDH13-212ENST00000569144 SYS1Q8N2H4 156 aa4.33□□□□□ -1.72
CDH13-212ENST00000569144 ZNF555Q8NEP9 628 aa4.33□□□□□ -1.72
CDH13-212ENST00000569144 OR5T1Q8NG75 326 aa4.33□□□□□ -1.72
CDH13-212ENST00000569144 OR52B4Q8NGK2 314 aa4.33□□□□□ -1.72
CDH13-212ENST00000569144 OR10AC1Q8NH08 325 aa4.33□□□□□ -1.72
CDH13-212ENST00000569144 C11orf45Q8TAV5 145 aa4.33□□□□□ -1.72
CDH13-212ENST00000569144 CCDC107Q8WV48 283 aa4.33□□□□□ -1.72
CDH13-212ENST00000569144 USMG5Q96IX5 58 aa4.33□□□□□ -1.72
CDH13-212ENST00000569144 C4orf36Q96KX1 117 aa4.33□□□□□ -1.72
CDH13-212ENST00000569144 Q96MT0 163 aa4.33□□□□□ -1.72
CDH13-212ENST00000569144 ABHD14AQ9BUJ0 271 aa4.33□□□□□ -1.72
CDH13-212ENST00000569144 FGF20Q9NP95 211 aaPredicted RBP4.33□□□□□ -1.72
CDH13-212ENST00000569144 RCC2Q9P258 522 aaKnown RBP4.33□□□□□ -1.72
CDH13-212ENST00000569144 FBXL17Q9UF56 701 aa4.33□□□□□ -1.72
CDH13-212ENST00000569144 APOBP04114 4563 aaKnown RBP4.33□□□□□ -1.72
CDH13-212ENST00000569144 SAA2-SAA4A0A096LPE2 208 aa4.32□□□□□ -1.72
CDH13-212ENST00000569144 KIR2DL5BA0A0G2JN68 375 aa4.32□□□□□ -1.72
CDH13-212ENST00000569144 KIR2DL5BA0A0G2JPC4 375 aa4.32□□□□□ -1.72
CDH13-212ENST00000569144 OR5H14A6NHG9 310 aa4.32□□□□□ -1.72
CDH13-212ENST00000569144 C2orf70A6NJV1 201 aa4.32□□□□□ -1.72
CDH13-212ENST00000569144 IGLL5B9A064 214 aa4.32□□□□□ -1.72
CDH13-212ENST00000569144 E9PI62 339 aa4.32□□□□□ -1.72
CDH13-212ENST00000569144 J3QLW9 94 aa4.32□□□□□ -1.72
CDH13-212ENST00000569144 AIPO00170 330 aa4.32□□□□□ -1.72
CDH13-212ENST00000569144 BMPR1BO00238 502 aa4.32□□□□□ -1.72
CDH13-212ENST00000569144 SLC22A1O15245 554 aa4.32□□□□□ -1.72
CDH13-212ENST00000569144 RBBP9O75884 186 aa4.32□□□□□ -1.72
CDH13-212ENST00000569144 OR7C1O76099 320 aaPredicted RBP4.32□□□□□ -1.72
CDH13-212ENST00000569144 HBZP02008 142 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms