RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 SDHAF2Q9NX18 166 aa8.45□□□□□ -1.06
CDH3-210ENST00000569117 COPZ2Q9P299 210 aa8.45□□□□□ -1.06
CDH3-210ENST00000569117 DPM3Q9P2X0 92 aa8.45□□□□□ -1.06
CDH3-210ENST00000569117 ZNF221Q9UK13 617 aa8.45□□□□□ -1.06
CDH3-210ENST00000569117 NUP50Q9UKX7 468 aa8.45□□□□□ -1.06
CDH3-210ENST00000569117 GAB2Q9UQC2 676 aa8.45□□□□□ -1.06
CDH3-210ENST00000569117 SONP18583 2426 aaKnown RBP8.44□□□□□ -1.06
CDH3-210ENST00000569117 IGHV3OR16-10A0A075B7F0 116 aa8.44□□□□□ -1.06
CDH3-210ENST00000569117 FAM240BA0A1B0GVZ2 78 aa8.44□□□□□ -1.06
CDH3-210ENST00000569117 A0A1W2PRD5 423 aa8.44□□□□□ -1.06
CDH3-210ENST00000569117 A0A1W2PRF3 423 aa8.44□□□□□ -1.06
CDH3-210ENST00000569117 A0A1W2PRM7 423 aa8.44□□□□□ -1.06
CDH3-210ENST00000569117 LEUTXA8MZ59 168 aa8.44□□□□□ -1.06
CDH3-210ENST00000569117 GPR31O00270 319 aa8.44□□□□□ -1.06
CDH3-210ENST00000569117 CTSDP07339 412 aaPredicted RBP8.44□□□□□ -1.06
CDH3-210ENST00000569117 PGAM2P15259 253 aa8.44□□□□□ -1.06
CDH3-210ENST00000569117 RND3P61587 244 aa8.44□□□□□ -1.06
CDH3-210ENST00000569117 BAMBIQ13145 260 aa8.44□□□□□ -1.06
CDH3-210ENST00000569117 EIF4EBP1Q13541 118 aaPredicted RBP8.44□□□□□ -1.06
CDH3-210ENST00000569117 RPL39P5Q59GN2 51 aa8.44□□□□□ -1.06
CDH3-210ENST00000569117 ZNF818PQ6ZRF7 136 aa8.44□□□□□ -1.06
CDH3-210ENST00000569117 LHFPL4Q7Z7J7 247 aa8.44□□□□□ -1.06
CDH3-210ENST00000569117 ENKURQ8TC29 256 aa8.44□□□□□ -1.06
CDH3-210ENST00000569117 ZFAND1Q8TCF1 268 aa8.44□□□□□ -1.06
CDH3-210ENST00000569117 RTN4IP1Q8WWV3 396 aaPredicted RBP8.44□□□□□ -1.06
CDH3-210ENST00000569117 RPEQ96AT9 228 aa8.44□□□□□ -1.06
CDH3-210ENST00000569117 AJUBAQ96IF1 538 aa8.44□□□□□ -1.06
CDH3-210ENST00000569117 RAX2Q96IS3 184 aa8.44□□□□□ -1.06
CDH3-210ENST00000569117 AKR1E2Q96JD6 320 aa8.44□□□□□ -1.06
CDH3-210ENST00000569117 SCGB3A2Q96PL1 93 aa8.44□□□□□ -1.06
CDH3-210ENST00000569117 JMJD8Q96S16 334 aa8.44□□□□□ -1.06
CDH3-210ENST00000569117 CCL28Q9NRJ3 127 aa8.44□□□□□ -1.06
CDH3-210ENST00000569117 SLC2A9Q9NRM0 540 aa8.44□□□□□ -1.06
CDH3-210ENST00000569117 RNF150Q9ULK6 438 aa8.44□□□□□ -1.06
CDH3-210ENST00000569117 VSIG4Q9Y279 399 aa8.44□□□□□ -1.06
CDH3-210ENST00000569117 NAV3Q8IVL0 2385 aa8.44□□□□□ -1.06
CDH3-210ENST00000569117 HIVEP2P31629 2446 aa8.43□□□□□ -1.06
CDH3-210ENST00000569117 A0A1W2PPI3 338 aa8.43□□□□□ -1.06
CDH3-210ENST00000569117 M0R1X1 148 aa8.43□□□□□ -1.06
CDH3-210ENST00000569117 PROP1O75360 226 aa8.43□□□□□ -1.06
CDH3-210ENST00000569117 TCRBP04435 133 aa8.43□□□□□ -1.06
CDH3-210ENST00000569117 DIAPH2-AS1Q14236 149 aa8.43□□□□□ -1.06
CDH3-210ENST00000569117 CCDC144NLQ6NUI1 221 aa8.43□□□□□ -1.06
CDH3-210ENST00000569117 IL17RELQ6ZVW7 336 aa8.43□□□□□ -1.06
CDH3-210ENST00000569117 NRARPQ7Z6K4 114 aa8.43□□□□□ -1.06
CDH3-210ENST00000569117 TGIF2LXQ8IUE1 241 aa8.43□□□□□ -1.06
CDH3-210ENST00000569117 CMTM1Q8IZ96 169 aa8.43□□□□□ -1.06
CDH3-210ENST00000569117 OR8H3Q8N146 312 aa8.43□□□□□ -1.06
CDH3-210ENST00000569117 DUSP18Q8NEJ0 188 aa8.43□□□□□ -1.06
CDH3-210ENST00000569117 C17orf50Q8WW18 174 aa8.43□□□□□ -1.06
CDH3-210ENST00000569117 MALSU1Q96EH3 234 aa8.43□□□□□ -1.06
CDH3-210ENST00000569117 HSD17B10Q99714 261 aaKnown RBP8.43□□□□□ -1.06
CDH3-210ENST00000569117 C20orf85Q9H1P6 137 aa8.43□□□□□ -1.06
CDH3-210ENST00000569117 C5orf66Q9H5L9 145 aa8.43□□□□□ -1.06
CDH3-210ENST00000569117 NUDT15Q9NV35 164 aa8.43□□□□□ -1.06
CDH3-210ENST00000569117 CDC42EP3Q9UKI2 254 aa8.43□□□□□ -1.06
CDH3-210ENST00000569117 GPR132Q9UNW8 380 aa8.43□□□□□ -1.06
CDH3-210ENST00000569117 C14orf166Q9Y224 244 aaKnown RBP8.43□□□□□ -1.06
CDH3-210ENST00000569117 IGHV1-3A0A0C4DH29 117 aa8.42□□□□□ -1.06
CDH3-210ENST00000569117 A0A0U1RQK1 487 aa8.42□□□□□ -1.06
CDH3-210ENST00000569117 GAPDHP04406 335 aaKnown RBP8.42□□□□□ -1.06
CDH3-210ENST00000569117 FBP1P09467 338 aa8.42□□□□□ -1.06
CDH3-210ENST00000569117 PI3P19957 117 aa8.42□□□□□ -1.06
CDH3-210ENST00000569117 S100GP29377 79 aa8.42□□□□□ -1.06
CDH3-210ENST00000569117 DUTP33316 252 aaKnown RBP8.42□□□□□ -1.06
CDH3-210ENST00000569117 REG1BP48304 166 aa8.42□□□□□ -1.06
CDH3-210ENST00000569117 THBS3P49746 956 aa8.42□□□□□ -1.06
CDH3-210ENST00000569117 PIGPP57054 158 aa8.42□□□□□ -1.06
CDH3-210ENST00000569117 HABP2Q14520 560 aaPredicted RBP8.42□□□□□ -1.06
CDH3-210ENST00000569117 RGS21Q2M5E4 152 aa8.42□□□□□ -1.06
CDH3-210ENST00000569117 ABCA11PQ4W5N1 156 aa8.42□□□□□ -1.06
CDH3-210ENST00000569117 PHLDA2Q53GA4 152 aa8.42□□□□□ -1.06
CDH3-210ENST00000569117 ZNF66Q6ZN08 573 aa8.42□□□□□ -1.06
CDH3-210ENST00000569117 KCTD9Q7L273 389 aa8.42□□□□□ -1.06
CDH3-210ENST00000569117 DYNAPQ8N1N2 210 aa8.42□□□□□ -1.06
CDH3-210ENST00000569117 CCDC71LQ8N9Z2 235 aa8.42□□□□□ -1.06
CDH3-210ENST00000569117 ADTRPQ96IZ2 230 aa8.42□□□□□ -1.06
CDH3-210ENST00000569117 NABP2Q9BQ15 211 aa8.42□□□□□ -1.06
CDH3-210ENST00000569117 RTBDNQ9BSG5 229 aaPredicted RBP8.42□□□□□ -1.06
CDH3-210ENST00000569117 MRPL20Q9BYC9 149 aaKnown RBP8.42□□□□□ -1.06
CDH3-210ENST00000569117 MS4A7Q9GZW8 240 aaPredicted RBP8.42□□□□□ -1.06
CDH3-210ENST00000569117 HILPDAQ9Y5L2 63 aa8.42□□□□□ -1.06
CDH3-210ENST00000569117 NUBP2Q9Y5Y2 271 aa8.42□□□□□ -1.06
CDH3-210ENST00000569117 RNF212BA8MTL3 300 aa8.41□□□□□ -1.06
CDH3-210ENST00000569117 VGLL3A8MV65 326 aa8.41□□□□□ -1.06
CDH3-210ENST00000569117 ARPC1BO15143 372 aaKnown RBP8.41□□□□□ -1.06
CDH3-210ENST00000569117 TNFSF12O43508 249 aa8.41□□□□□ -1.06
CDH3-210ENST00000569117 RLN1P04808 185 aa8.41□□□□□ -1.06
CDH3-210ENST00000569117 SRP14P37108 136 aaKnown RBP8.41□□□□□ -1.06
CDH3-210ENST00000569117 DYNLT3P51808 116 aa8.41□□□□□ -1.06
CDH3-210ENST00000569117 ARHGDIBP52566 201 aa8.41□□□□□ -1.06
CDH3-210ENST00000569117 TAS2R31P59538 309 aa8.41□□□□□ -1.06
CDH3-210ENST00000569117 UBE2MP61081 183 aaKnown RBP8.41□□□□□ -1.06
CDH3-210ENST00000569117 CATR1Q13166 79 aa8.41□□□□□ -1.06
CDH3-210ENST00000569117 SCGB2A2Q13296 93 aa8.41□□□□□ -1.06
CDH3-210ENST00000569117 SSX2Q16385 188 aa8.41□□□□□ -1.06
CDH3-210ENST00000569117 TMED4Q7Z7H5 227 aa8.41□□□□□ -1.06
CDH3-210ENST00000569117 CENPSQ8N2Z9 138 aa8.41□□□□□ -1.06
CDH3-210ENST00000569117 DDB2Q92466 427 aa8.41□□□□□ -1.06
CDH3-210ENST00000569117 CFHR4Q92496 578 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms