RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 SLA2Q9H6Q3 261 aa11.22□□□□□ -0.61
USB1-214ENST00000568848 SRD5A3Q9H8P0 318 aa11.22□□□□□ -0.61
USB1-214ENST00000568848 RAB9BQ9NP90 201 aa11.22□□□□□ -0.61
USB1-214ENST00000568848 TPRKBQ9Y3C4 175 aa11.22□□□□□ -0.61
USB1-214ENST00000568848 SHISA3A0PJX4 238 aa11.21□□□□□ -0.61
USB1-214ENST00000568848 OR5H14A6NHG9 310 aa11.21□□□□□ -0.61
USB1-214ENST00000568848 ZNF785A8K8V0 405 aa11.21□□□□□ -0.61
USB1-214ENST00000568848 H0Y980 276 aa11.21□□□□□ -0.61
USB1-214ENST00000568848 RAB29O14966 203 aa11.21□□□□□ -0.61
USB1-214ENST00000568848 ZP3P21754 424 aa11.21□□□□□ -0.61
USB1-214ENST00000568848 MAPK3P27361 379 aaPredicted RBP11.21□□□□□ -0.61
USB1-214ENST00000568848 LIPKQ5VXJ0 399 aa11.21□□□□□ -0.61
USB1-214ENST00000568848 IZUMO2Q6UXV1 221 aa11.21□□□□□ -0.61
USB1-214ENST00000568848 C19orf35Q6ZS72 473 aa11.21□□□□□ -0.61
USB1-214ENST00000568848 CEACAM19Q7Z692 300 aa11.21□□□□□ -0.61
USB1-214ENST00000568848 LRRTM1Q86UE6 522 aa11.21□□□□□ -0.61
USB1-214ENST00000568848 CDH26Q8IXH8 852 aa11.21□□□□□ -0.61
USB1-214ENST00000568848 MS4A15Q8N5U1 240 aa11.21□□□□□ -0.61
USB1-214ENST00000568848 TMEM203Q969S6 136 aa11.21□□□□□ -0.61
USB1-214ENST00000568848 AGMATQ9BSE5 352 aa11.21□□□□□ -0.61
USB1-214ENST00000568848 DUSP21Q9H596 190 aa11.21□□□□□ -0.61
USB1-214ENST00000568848 CHMP1AQ9HD42 196 aaPredicted RBP11.21□□□□□ -0.61
USB1-214ENST00000568848 PEF1Q9UBV8 284 aaKnown RBP11.21□□□□□ -0.61
USB1-214ENST00000568848 STEAP1Q9UHE8 339 aa11.21□□□□□ -0.61
USB1-214ENST00000568848 KIAA1109Q2LD37 5005 aa11.2□□□□□ -0.62
USB1-214ENST00000568848 RGS10O43665 173 aa11.2□□□□□ -0.62
USB1-214ENST00000568848 CA11O75493 328 aa11.2□□□□□ -0.62
USB1-214ENST00000568848 CNIH1O95406 144 aa11.2□□□□□ -0.62
USB1-214ENST00000568848 IGLV2-23P01705 113 aa11.2□□□□□ -0.62
USB1-214ENST00000568848 HLA-AP01891 365 aaKnown RBP11.2□□□□□ -0.62
USB1-214ENST00000568848 SCTP09683 121 aa11.2□□□□□ -0.62
USB1-214ENST00000568848 CD3GP09693 182 aa11.2□□□□□ -0.62
USB1-214ENST00000568848 HSMCR30P0CW71 290 aa11.2□□□□□ -0.62
USB1-214ENST00000568848 CRHBPP24387 322 aa11.2□□□□□ -0.62
USB1-214ENST00000568848 MAP2K4P45985 399 aa11.2□□□□□ -0.62
USB1-214ENST00000568848 TAGLNQ01995 201 aaKnown RBP11.2□□□□□ -0.62
USB1-214ENST00000568848 MRGPRG-AS1Q2M3A8 158 aa11.2□□□□□ -0.62
USB1-214ENST00000568848 RBM48Q5RL73 367 aaKnown RBP11.2□□□□□ -0.62
USB1-214ENST00000568848 LCN12Q6JVE5 192 aa11.2□□□□□ -0.62
USB1-214ENST00000568848 NKAIN3Q8N8D7 197 aa11.2□□□□□ -0.62
USB1-214ENST00000568848 CACNG8Q8WXS5 425 aa11.2□□□□□ -0.62
USB1-214ENST00000568848 C5orf30Q96GV9 206 aa11.2□□□□□ -0.62
USB1-214ENST00000568848 CNBD2Q96M20 576 aa11.2□□□□□ -0.62
USB1-214ENST00000568848 CCDC90BQ9GZT6 254 aa11.2□□□□□ -0.62
USB1-214ENST00000568848 COA4Q9NYJ1 87 aa11.2□□□□□ -0.62
USB1-214ENST00000568848 PIPOXQ9P0Z9 390 aa11.2□□□□□ -0.62
USB1-214ENST00000568848 VPS13DQ5THJ4 4388 aa11.2□□□□□ -0.62
USB1-214ENST00000568848 IGKV1-6A0A0C4DH72 117 aa11.19□□□□□ -0.62
USB1-214ENST00000568848 FAM90A23PA8MXZ1 464 aa11.19□□□□□ -0.62
USB1-214ENST00000568848 BMPR1BO00238 502 aa11.19□□□□□ -0.62
USB1-214ENST00000568848 DEDDO75618 318 aa11.19□□□□□ -0.62
USB1-214ENST00000568848 SRMP19623 302 aa11.19□□□□□ -0.62
USB1-214ENST00000568848 CD40LGP29965 261 aa11.19□□□□□ -0.62
USB1-214ENST00000568848 CEACAM6P40199 344 aa11.19□□□□□ -0.62
USB1-214ENST00000568848 MECP2P51608 486 aaKnown RBP11.19□□□□□ -0.62
USB1-214ENST00000568848 RPS25P62851 125 aaKnown RBP11.19□□□□□ -0.62
USB1-214ENST00000568848 UNC119Q13432 240 aa11.19□□□□□ -0.62
USB1-214ENST00000568848 GUCA2BQ16661 112 aa11.19□□□□□ -0.62
USB1-214ENST00000568848 RPEL1Q2QD12 228 aa11.19□□□□□ -0.62
USB1-214ENST00000568848 Q8N402 240 aa11.19□□□□□ -0.62
USB1-214ENST00000568848 THRSPQ92748 146 aa11.19□□□□□ -0.62
USB1-214ENST00000568848 UFD1Q92890 307 aa11.19□□□□□ -0.62
USB1-214ENST00000568848 WDR89Q96FK6 387 aaPredicted RBP11.19□□□□□ -0.62
USB1-214ENST00000568848 UQCC2Q9BRT2 126 aa11.19□□□□□ -0.62
USB1-214ENST00000568848 VCX3BQ9H321 246 aa11.19□□□□□ -0.62
USB1-214ENST00000568848 ABRACLQ9P1F3 81 aa11.19□□□□□ -0.62
USB1-214ENST00000568848 AK3Q9UIJ7 227 aa11.19□□□□□ -0.62
USB1-214ENST00000568848 RYR1P21817 5038 aa11.19□□□□□ -0.62
USB1-214ENST00000568848 FAM90A7PA6NKC0 464 aa11.18□□□□□ -0.62
USB1-214ENST00000568848 PPP5D1E7EU14 171 aa11.18□□□□□ -0.62
USB1-214ENST00000568848 M0R1X1 148 aa11.18□□□□□ -0.62
USB1-214ENST00000568848 SLC22A1O15245 554 aa11.18□□□□□ -0.62
USB1-214ENST00000568848 TPPPO94811 219 aa11.18□□□□□ -0.62
USB1-214ENST00000568848 TPBGQ13641 420 aa11.18□□□□□ -0.62
USB1-214ENST00000568848 HSD17B12Q53GQ0 312 aa11.18□□□□□ -0.62
USB1-214ENST00000568848 LY6G6FQ5SQ64 297 aa11.18□□□□□ -0.62
USB1-214ENST00000568848 GLT8D1Q68CQ7 371 aa11.18□□□□□ -0.62
USB1-214ENST00000568848 FAM71F2Q6NXP2 309 aa11.18□□□□□ -0.62
USB1-214ENST00000568848 ZNF343Q6P1L6 599 aa11.18□□□□□ -0.62
USB1-214ENST00000568848 ZNF880Q6PDB4 577 aa11.18□□□□□ -0.62
USB1-214ENST00000568848 TMEM91Q6ZNR0 172 aa11.18□□□□□ -0.62
USB1-214ENST00000568848 NEDD4LQ96PU5 975 aa11.18□□□□□ -0.62
USB1-214ENST00000568848 TINAGL1Q9GZM7 467 aaPredicted RBP11.18□□□□□ -0.62
USB1-214ENST00000568848 S4R3C0 116 aa11.18□□□□□ -0.62
USB1-214ENST00000568848 CXorf65A6NEN9 183 aa11.17□□□□□ -0.62
USB1-214ENST00000568848 SRRM4A7MD48 611 aaKnown RBP11.17□□□□□ -0.62
USB1-214ENST00000568848 OR11H12B2RN74 326 aa11.17□□□□□ -0.62
USB1-214ENST00000568848 SOCS1O15524 211 aa11.17□□□□□ -0.62
USB1-214ENST00000568848 NAPSAO96009 420 aa11.17□□□□□ -0.62
USB1-214ENST00000568848 IGHV3-23P01764 117 aa11.17□□□□□ -0.62
USB1-214ENST00000568848 CRYGBP07316 175 aa11.17□□□□□ -0.62
USB1-214ENST00000568848 UCHL1P09936 223 aa11.17□□□□□ -0.62
USB1-214ENST00000568848 MC5RP33032 325 aa11.17□□□□□ -0.62
USB1-214ENST00000568848 ZNF45Q02386 682 aa11.17□□□□□ -0.62
USB1-214ENST00000568848 C1orf100Q5SVJ3 147 aa11.17□□□□□ -0.62
USB1-214ENST00000568848 IDO2Q6ZQW0 420 aa11.17□□□□□ -0.62
USB1-214ENST00000568848 PRSS48Q7RTY5 328 aa11.17□□□□□ -0.62
USB1-214ENST00000568848 ZNF554Q86TJ5 538 aa11.17□□□□□ -0.62
USB1-214ENST00000568848 PHYHIPQ92561 330 aa11.17□□□□□ -0.62
USB1-214ENST00000568848 TSNAXQ99598 290 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms