RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 J3QT63 122 aa7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 NTN3O00634 580 aaPredicted RBP7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 ZNF705DP0CH99 300 aaPredicted RBP7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 ZNF705BP0CI00 300 aaPredicted RBP7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 PRB4P10163 310 aaPredicted RBP7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 NDUFB7P17568 137 aa7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 HOXC12P31275 282 aa7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 ARR3P36575 388 aa7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 CCL11P51671 97 aa7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 SLC10A1Q14973 349 aa7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 GALMQ96C23 342 aa7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 STRADBQ9C0K7 418 aa7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 A0A1W2PPV4 95 aa7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 C11orf94C9JXX5 98 aa7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 SH2D1BO14796 132 aa7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 PTBP3O95758 552 aaKnown RBP7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 IGLV2-14P01704 120 aa7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 GYPAP02724 150 aa7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 TNFRSF9Q07011 255 aa7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 RNFT1Q5M7Z0 435 aa7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 C16orf54Q6UWD8 224 aa7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 ZNF600Q6ZNG1 722 aa7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 TECTBQ96PL2 329 aa7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 CDX2Q99626 313 aaPredicted RBP7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 HEYLQ9NQ87 328 aaPredicted RBP7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 PIEZO2Q9H5I5 2752 aa7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 DNPH1O43598 174 aa7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 TNFSF15O95150 251 aa7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 NDUFB4O95168 129 aa7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 C1QTNF9P0C862 333 aa7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 MYOD1P15172 320 aa7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 RPL23P62829 140 aaKnown RBP7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 LRRC75BQ2VPJ9 315 aa7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 PRAMEF5Q5TYX0 476 aa7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 GTF3AQ92664 365 aaKnown RBP7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 C14orf144Q96I85 54 aa7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 YPEL4Q96NS1 127 aa7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 IMMP2LQ96T52 175 aa7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 PRDM13Q9H4Q3 707 aa7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 CISD1Q9NZ45 108 aaKnown RBP7.54□□□□□ -1.2
HDGFL3-206ENST00000568294 ZNF729A6NN14 1252 aaPredicted RBP7.53□□□□□ -1.2
HDGFL3-206ENST00000568294 DDTP30046 118 aa7.53□□□□□ -1.2
HDGFL3-206ENST00000568294 GNB2P62879 340 aa7.53□□□□□ -1.2
HDGFL3-206ENST00000568294 COLCA1Q6ZS62 124 aa7.53□□□□□ -1.2
HDGFL3-206ENST00000568294 MRGPRGQ86SM5 289 aa7.53□□□□□ -1.2
HDGFL3-206ENST00000568294 IL22RA2Q969J5 263 aa7.53□□□□□ -1.2
HDGFL3-206ENST00000568294 QTRT1Q9BXR0 403 aaKnown RBP7.53□□□□□ -1.2
HDGFL3-206ENST00000568294 ADAMTS20P59510 1910 aa7.53□□□□□ -1.2
HDGFL3-206ENST00000568294 DMXL2Q8TDJ6 3036 aa7.53□□□□□ -1.2
HDGFL3-206ENST00000568294 ATMQ13315 3056 aa7.53□□□□□ -1.2
HDGFL3-206ENST00000568294 SELLP14151 372 aa7.53□□□□□ -1.2
HDGFL3-206ENST00000568294 PSG7Q13046 419 aa7.53□□□□□ -1.2
HDGFL3-206ENST00000568294 RPL39P5Q59GN2 51 aa7.53□□□□□ -1.2
HDGFL3-206ENST00000568294 Q6ZR03 302 aa7.53□□□□□ -1.2
HDGFL3-206ENST00000568294 Q6ZSR3 168 aa7.53□□□□□ -1.2
HDGFL3-206ENST00000568294 DMRTC2Q8IXT2 367 aaPredicted RBP7.53□□□□□ -1.2
HDGFL3-206ENST00000568294 OR13A1Q8NGR1 328 aa7.53□□□□□ -1.2
HDGFL3-206ENST00000568294 MALSU1Q96EH3 234 aa7.53□□□□□ -1.2
HDGFL3-206ENST00000568294 NAT8Q9UHE5 227 aa7.53□□□□□ -1.2
HDGFL3-206ENST00000568294 TNRC18O15417 2968 aaPredicted RBP7.53□□□□□ -1.2
HDGFL3-206ENST00000568294 OR5B21A6NL26 309 aa7.53□□□□□ -1.2
HDGFL3-206ENST00000568294 M0R1X1 148 aa7.53□□□□□ -1.2
HDGFL3-206ENST00000568294 AQP7O14520 342 aa7.53□□□□□ -1.2
HDGFL3-206ENST00000568294 AMBPP02760 352 aa7.53□□□□□ -1.2
HDGFL3-206ENST00000568294 MIC13Q5XKP0 118 aa7.53□□□□□ -1.2
HDGFL3-206ENST00000568294 Q6P435 159 aa7.53□□□□□ -1.2
HDGFL3-206ENST00000568294 C1QL4Q86Z23 238 aa7.53□□□□□ -1.2
HDGFL3-206ENST00000568294 ABHD12Q8N2K0 398 aa7.53□□□□□ -1.2
HDGFL3-206ENST00000568294 C5orf30Q96GV9 206 aa7.53□□□□□ -1.2
HDGFL3-206ENST00000568294 SIRT7Q9NRC8 400 aa7.53□□□□□ -1.2
HDGFL3-206ENST00000568294 CBLN4Q9NTU7 201 aa7.53□□□□□ -1.2
HDGFL3-206ENST00000568294 MPC1Q9Y5U8 109 aa7.53□□□□□ -1.2
HDGFL3-206ENST00000568294 ZNF318Q5VUA4 2279 aa7.52□□□□□ -1.2
HDGFL3-206ENST00000568294 TRGV5A0A0B4J1U4 118 aa7.52□□□□□ -1.21
HDGFL3-206ENST00000568294 LINC00473A8K010 186 aa7.52□□□□□ -1.21
HDGFL3-206ENST00000568294 HOXB1P14653 301 aaPredicted RBP7.52□□□□□ -1.21
HDGFL3-206ENST00000568294 CDC34P49427 236 aaPredicted RBP7.52□□□□□ -1.21
HDGFL3-206ENST00000568294 TCL1AP56279 114 aa7.52□□□□□ -1.21
HDGFL3-206ENST00000568294 MSMO1Q15800 293 aa7.52□□□□□ -1.21
HDGFL3-206ENST00000568294 PDLIM3Q53GG5 364 aaPredicted RBP7.52□□□□□ -1.21
HDGFL3-206ENST00000568294 FBXW9Q5XUX1 488 aa7.52□□□□□ -1.21
HDGFL3-206ENST00000568294 OR2Z1Q8NG97 314 aa7.52□□□□□ -1.21
HDGFL3-206ENST00000568294 SNIP1Q8TAD8 396 aaKnown RBP7.52□□□□□ -1.21
HDGFL3-206ENST00000568294 NANOS1Q8WY41 292 aaKnown RBP7.52□□□□□ -1.21
HDGFL3-206ENST00000568294 FAM103A1Q9BTL3 118 aaKnown RBP7.52□□□□□ -1.21
HDGFL3-206ENST00000568294 RIMS4Q9H426 269 aaPredicted RBP7.52□□□□□ -1.21
HDGFL3-206ENST00000568294 GCM1Q9NP62 436 aa7.52□□□□□ -1.21
HDGFL3-206ENST00000568294 SPRR3Q9UBC9 169 aa7.52□□□□□ -1.21
HDGFL3-206ENST00000568294 POLDIP2Q9Y2S7 368 aa7.52□□□□□ -1.21
HDGFL3-206ENST00000568294 SPTA1P02549 2419 aa7.52□□□□□ -1.21
HDGFL3-206ENST00000568294 A0A1W2PNU3 283 aaPredicted RBP7.52□□□□□ -1.21
HDGFL3-206ENST00000568294 IGHV3-48P01763 117 aa7.52□□□□□ -1.21
HDGFL3-206ENST00000568294 HIST1H1BP16401 226 aaKnown RBP7.52□□□□□ -1.21
HDGFL3-206ENST00000568294 COX5AP20674 150 aa7.52□□□□□ -1.21
HDGFL3-206ENST00000568294 LMO1P25800 156 aa7.52□□□□□ -1.21
HDGFL3-206ENST00000568294 GNG10P50151 68 aa7.52□□□□□ -1.21
HDGFL3-206ENST00000568294 SOX8P57073 446 aa7.52□□□□□ -1.21
HDGFL3-206ENST00000568294 RAB4BP61018 213 aa7.52□□□□□ -1.21
HDGFL3-206ENST00000568294 MRPL49Q13405 166 aaKnown RBP7.52□□□□□ -1.21
HDGFL3-206ENST00000568294 HES3Q5TGS1 186 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms