RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 NHLH2Q02577 135 aa5.82□□□□□ -1.48
SMG1-215ENST00000568239 PRB3Q04118 309 aaPredicted RBP5.82□□□□□ -1.48
SMG1-215ENST00000568239 ESCO2Q56NI9 601 aa5.82□□□□□ -1.48
SMG1-215ENST00000568239 DMBX1Q8NFW5 382 aa5.82□□□□□ -1.48
SMG1-215ENST00000568239 SCARB1Q8WTV0 552 aa5.82□□□□□ -1.48
SMG1-215ENST00000568239 TIMD4Q96H15 378 aa5.82□□□□□ -1.48
SMG1-215ENST00000568239 S1PR3Q99500 378 aa5.82□□□□□ -1.48
SMG1-215ENST00000568239 PLEKHA2Q9HB19 425 aa5.82□□□□□ -1.48
SMG1-215ENST00000568239 TAS2R3Q9NYW6 316 aa5.82□□□□□ -1.48
SMG1-215ENST00000568239 FBXL17Q9UF56 701 aa5.82□□□□□ -1.48
SMG1-215ENST00000568239 RPUSD1Q9UJJ7 312 aaKnown RBP5.82□□□□□ -1.48
SMG1-215ENST00000568239 ASH1LQ9NR48 2969 aaKnown RBP5.82□□□□□ -1.48
SMG1-215ENST00000568239 IAPPP10997 89 aa5.81□□□□□ -1.48
SMG1-215ENST00000568239 TPT1P13693 172 aaKnown RBP5.81□□□□□ -1.48
SMG1-215ENST00000568239 BRWD1-AS2P59051 145 aa5.81□□□□□ -1.48
SMG1-215ENST00000568239 RPL7L1Q6DKI1 246 aaKnown RBP5.81□□□□□ -1.48
SMG1-215ENST00000568239 C1orf229Q6ZS94 237 aaPredicted RBP5.81□□□□□ -1.48
SMG1-215ENST00000568239 H2BFWTQ7Z2G1 175 aa5.81□□□□□ -1.48
SMG1-215ENST00000568239 BAP18Q8IXM2 172 aa5.81□□□□□ -1.48
SMG1-215ENST00000568239 VKORC1L1Q8N0U8 176 aa5.81□□□□□ -1.48
SMG1-215ENST00000568239 OR2C3Q8N628 320 aa5.81□□□□□ -1.48
SMG1-215ENST00000568239 TMEM217Q8N7C4 229 aa5.81□□□□□ -1.48
SMG1-215ENST00000568239 CORO2AQ92828 525 aa5.81□□□□□ -1.48
SMG1-215ENST00000568239 RAB1CQ92928 201 aa5.81□□□□□ -1.48
SMG1-215ENST00000568239 LSM10Q969L4 123 aaKnown RBP5.81□□□□□ -1.48
SMG1-215ENST00000568239 KAAG1Q9UBP8 84 aa5.81□□□□□ -1.48
SMG1-215ENST00000568239 PRELID3BQ9Y3B1 194 aa5.81□□□□□ -1.48
SMG1-215ENST00000568239 A6NNC1 897 aa5.81□□□□□ -1.48
SMG1-215ENST00000568239 MARCH11A6NNE9 402 aa5.81□□□□□ -1.48
SMG1-215ENST00000568239 TNFRSF13BO14836 293 aaPredicted RBP5.81□□□□□ -1.48
SMG1-215ENST00000568239 CST7O76096 145 aa5.81□□□□□ -1.48
SMG1-215ENST00000568239 ATG12O94817 140 aa5.81□□□□□ -1.48
SMG1-215ENST00000568239 P2RY1P47900 373 aa5.81□□□□□ -1.48
SMG1-215ENST00000568239 DLX1P56177 255 aa5.81□□□□□ -1.48
SMG1-215ENST00000568239 ID3Q02535 119 aa5.81□□□□□ -1.48
SMG1-215ENST00000568239 EIF4EBP1Q13541 118 aaPredicted RBP5.81□□□□□ -1.48
SMG1-215ENST00000568239 CLINT1Q14677 625 aa5.81□□□□□ -1.48
SMG1-215ENST00000568239 C11orf71Q6IPW1 123 aa5.81□□□□□ -1.48
SMG1-215ENST00000568239 HEPN1Q6WQI6 88 aa5.81□□□□□ -1.48
SMG1-215ENST00000568239 TMED6Q8WW62 240 aa5.81□□□□□ -1.48
SMG1-215ENST00000568239 NEU4Q8WWR8 484 aaPredicted RBP5.81□□□□□ -1.48
SMG1-215ENST00000568239 BSCL2Q96G97 398 aaPredicted RBP5.81□□□□□ -1.48
SMG1-215ENST00000568239 MMP24Q9Y5R2 645 aa5.81□□□□□ -1.48
SMG1-215ENST00000568239 CLEC18AA5D8T8 446 aa5.8□□□□□ -1.48
SMG1-215ENST00000568239 GPR137BO60478 399 aa5.8□□□□□ -1.48
SMG1-215ENST00000568239 FBXO24O75426 580 aa5.8□□□□□ -1.48
SMG1-215ENST00000568239 IGHV2-70P01814 119 aa5.8□□□□□ -1.48
SMG1-215ENST00000568239 WNT2P09544 360 aa5.8□□□□□ -1.48
SMG1-215ENST00000568239 REG1BP48304 166 aa5.8□□□□□ -1.48
SMG1-215ENST00000568239 MSMO1Q15800 293 aa5.8□□□□□ -1.48
SMG1-215ENST00000568239 SPINK9Q5DT21 86 aa5.8□□□□□ -1.48
SMG1-215ENST00000568239 CLLU1Q5K131 121 aa5.8□□□□□ -1.48
SMG1-215ENST00000568239 CLEC18CQ8NCF0 446 aa5.8□□□□□ -1.48
SMG1-215ENST00000568239 OR8B3Q8NGG8 313 aa5.8□□□□□ -1.48
SMG1-215ENST00000568239 OR10X1Q8NGY0 326 aa5.8□□□□□ -1.48
SMG1-215ENST00000568239 CD300LFQ8TDQ1 290 aa5.8□□□□□ -1.48
SMG1-215ENST00000568239 OR8B2Q96RD0 313 aa5.8□□□□□ -1.48
SMG1-215ENST00000568239 CYTL1Q9NRR1 136 aa5.8□□□□□ -1.48
SMG1-215ENST00000568239 CRYBG3Q68DQ2 2970 aa5.8□□□□□ -1.48
SMG1-215ENST00000568239 RPS10-NUDT3A0A1W2PQS6 291 aa5.8□□□□□ -1.48
SMG1-215ENST00000568239 TAAR5O14804 337 aa5.8□□□□□ -1.48
SMG1-215ENST00000568239 SYNGR2O43760 224 aa5.8□□□□□ -1.48
SMG1-215ENST00000568239 TMEM50AO95807 157 aa5.8□□□□□ -1.48
SMG1-215ENST00000568239 CRYZL1O95825 349 aa5.8□□□□□ -1.48
SMG1-215ENST00000568239 RNF224P0DH78 156 aa5.8□□□□□ -1.48
SMG1-215ENST00000568239 ERVK-16P61578 105 aa5.8□□□□□ -1.48
SMG1-215ENST00000568239 EWSR1Q01844 656 aaKnown RBP eCLIP5.8□□□□□ -1.48
SMG1-215ENST00000568239 GPR157Q5UAW9 335 aa5.8□□□□□ -1.48
SMG1-215ENST00000568239 DTX2Q86UW9 622 aa5.8□□□□□ -1.48
SMG1-215ENST00000568239 R3HDM4Q96D70 268 aa5.8□□□□□ -1.48
SMG1-215ENST00000568239 RAB39BQ96DA2 213 aa5.8□□□□□ -1.48
SMG1-215ENST00000568239 LPAR3Q9UBY5 353 aa5.8□□□□□ -1.48
SMG1-215ENST00000568239 TNCP24821 2201 aa5.8□□□□□ -1.48
SMG1-215ENST00000568239 SVEP1Q4LDE5 3571 aa5.8□□□□□ -1.48
SMG1-215ENST00000568239 UTP20O75691 2785 aaKnown RBP5.8□□□□□ -1.48
SMG1-215ENST00000568239 PITX3O75364 302 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 HPRT1P00492 218 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 SLC25A6P12236 298 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 OR2B8PP59922 312 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 RPL23AP62750 156 aaKnown RBP5.79□□□□□ -1.48
SMG1-215ENST00000568239 SLC25A48Q6ZT89 311 aaKnown RBP5.79□□□□□ -1.48
SMG1-215ENST00000568239 ODF3L1Q8IXM7 274 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 PDZD9Q8IXQ8 264 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 ZNF843Q8N446 348 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 TMEM252Q8N6L7 170 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 ZNF439Q8NDP4 499 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 C17orf50Q8WW18 174 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 CXorf58Q96LI9 332 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 SLC25A31Q9H0C2 315 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 PPIAL4CA0A0B4J2A2 164 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 IGSF23A1L1A6 192 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 H7C2Y5 167 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 TOR1AO14656 332 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 NMBP08949 121 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 PPIAL4GP0DN37 164 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 S100A1P23297 94 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 GNB2P62879 340 aa5.79□□□□□ -1.48
SMG1-215ENST00000568239 EIF5AP63241 154 aaKnown RBP5.79□□□□□ -1.48
SMG1-215ENST00000568239 TMEM267Q0VDI3 215 aaPredicted RBP5.79□□□□□ -1.48
SMG1-215ENST00000568239 TMEM155Q4W5P6 130 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms