RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 PDE6DO43924 150 aa9.29□□□□□ -0.92
PALB2-206ENST00000568219 GDF9O60383 454 aa9.29□□□□□ -0.92
PALB2-206ENST00000568219 CSN3P07498 182 aa9.29□□□□□ -0.92
PALB2-206ENST00000568219 ARL14EPLP0DKL9 152 aa9.29□□□□□ -0.92
PALB2-206ENST00000568219 CEBPDP49716 269 aaPredicted RBP9.29□□□□□ -0.92
PALB2-206ENST00000568219 GNG3P63215 75 aa9.29□□□□□ -0.92
PALB2-206ENST00000568219 OR4A47Q6IF82 309 aa9.29□□□□□ -0.92
PALB2-206ENST00000568219 SMIM15Q7Z3B0 74 aa9.29□□□□□ -0.92
PALB2-206ENST00000568219 QTRT1Q9BXR0 403 aaKnown RBP9.29□□□□□ -0.92
PALB2-206ENST00000568219 PLXNA2O75051 1894 aa9.29□□□□□ -0.92
PALB2-206ENST00000568219 TOX4O94842 621 aa9.29□□□□□ -0.92
PALB2-206ENST00000568219 IGHEP01854 428 aa9.29□□□□□ -0.92
PALB2-206ENST00000568219 DSCR4P56555 118 aaPredicted RBP9.29□□□□□ -0.92
PALB2-206ENST00000568219 ARG2P78540 354 aa9.29□□□□□ -0.92
PALB2-206ENST00000568219 LINC00696Q6ZRV3 163 aa9.29□□□□□ -0.92
PALB2-206ENST00000568219 OR4B1Q8NGF8 309 aa9.29□□□□□ -0.92
PALB2-206ENST00000568219 HS3ST6Q96QI5 342 aa9.29□□□□□ -0.92
PALB2-206ENST00000568219 SCRT1Q9BWW7 348 aa9.29□□□□□ -0.92
PALB2-206ENST00000568219 PNRC2Q9NPJ4 139 aaKnown RBP9.29□□□□□ -0.92
PALB2-206ENST00000568219 LAMTOR2Q9Y2Q5 125 aa9.29□□□□□ -0.92
PALB2-206ENST00000568219 GPR179Q6PRD1 2367 aa9.29□□□□□ -0.92
PALB2-206ENST00000568219 NUPR1O60356 82 aa9.29□□□□□ -0.92
PALB2-206ENST00000568219 OR10J4P0C629 311 aa9.29□□□□□ -0.92
PALB2-206ENST00000568219 CD1BP29016 333 aa9.29□□□□□ -0.92
PALB2-206ENST00000568219 GPR12P47775 334 aa9.29□□□□□ -0.92
PALB2-206ENST00000568219 ZNF726P1Q15940 193 aa9.29□□□□□ -0.92
PALB2-206ENST00000568219 OR5A2Q8NGI9 324 aa9.29□□□□□ -0.92
PALB2-206ENST00000568219 SGK494Q96LW2 274 aa9.29□□□□□ -0.92
PALB2-206ENST00000568219 SSBP3Q9BWW4 388 aaPredicted RBP9.29□□□□□ -0.92
PALB2-206ENST00000568219 ASCL3Q9NQ33 180 aa9.29□□□□□ -0.92
PALB2-206ENST00000568219 SCO2A0A1W2PP80 73 aa9.28□□□□□ -0.92
PALB2-206ENST00000568219 DPRXA6NFQ7 191 aa9.28□□□□□ -0.92
PALB2-206ENST00000568219 TIAF1O95411 115 aa9.28□□□□□ -0.92
PALB2-206ENST00000568219 FKBP2P26885 142 aaKnown RBP9.28□□□□□ -0.92
PALB2-206ENST00000568219 CCR5P51681 352 aa9.28□□□□□ -0.92
PALB2-206ENST00000568219 HIST3H3Q16695 136 aa9.28□□□□□ -0.92
PALB2-206ENST00000568219 HSD17B10Q99714 261 aaKnown RBP9.28□□□□□ -0.92
PALB2-206ENST00000568219 COL4A4P53420 1690 aaPredicted RBP9.28□□□□□ -0.92
PALB2-206ENST00000568219 CADP27708 2225 aa9.28□□□□□ -0.92
PALB2-206ENST00000568219 HELTA6NFD8 242 aa9.28□□□□□ -0.92
PALB2-206ENST00000568219 M0R1X1 148 aa9.28□□□□□ -0.92
PALB2-206ENST00000568219 CD99P14209 185 aa9.28□□□□□ -0.92
PALB2-206ENST00000568219 USF1P22415 310 aaPredicted RBP9.28□□□□□ -0.92
PALB2-206ENST00000568219 RPL31P62899 125 aaKnown RBP9.28□□□□□ -0.92
PALB2-206ENST00000568219 HYAL1Q12794 435 aa9.28□□□□□ -0.92
PALB2-206ENST00000568219 NMSQ5H8A3 153 aa9.28□□□□□ -0.92
PALB2-206ENST00000568219 LCN12Q6JVE5 192 aa9.28□□□□□ -0.92
PALB2-206ENST00000568219 RHBDD2Q6NTF9 364 aa9.28□□□□□ -0.92
PALB2-206ENST00000568219 MMD2Q8IY49 270 aa9.28□□□□□ -0.92
PALB2-206ENST00000568219 VKORC1L1Q8N0U8 176 aa9.28□□□□□ -0.92
PALB2-206ENST00000568219 OR52L2PQ8NGH6 319 aa9.28□□□□□ -0.92
PALB2-206ENST00000568219 R3HDM4Q96D70 268 aa9.28□□□□□ -0.92
PALB2-206ENST00000568219 PSMG3Q9BT73 122 aaPredicted RBP9.28□□□□□ -0.92
PALB2-206ENST00000568219 SPINT2O43291 252 aa9.28□□□□□ -0.92
PALB2-206ENST00000568219 SNAI2O43623 268 aa9.28□□□□□ -0.92
PALB2-206ENST00000568219 LILRA1O75019 489 aa9.28□□□□□ -0.92
PALB2-206ENST00000568219 MFAP2P55001 183 aa9.28□□□□□ -0.92
PALB2-206ENST00000568219 SOX8P57073 446 aa9.28□□□□□ -0.92
PALB2-206ENST00000568219 FGF12P61328 243 aa9.28□□□□□ -0.92
PALB2-206ENST00000568219 RAC1P63000 192 aa9.28□□□□□ -0.92
PALB2-206ENST00000568219 AESQ08117 197 aa9.28□□□□□ -0.92
PALB2-206ENST00000568219 DCAF10Q5QP82 559 aa9.28□□□□□ -0.92
PALB2-206ENST00000568219 DAZAP1Q96EP5 407 aaKnown RBP9.28□□□□□ -0.92
PALB2-206ENST00000568219 CDCA3Q99618 268 aaPredicted RBP9.28□□□□□ -0.92
PALB2-206ENST00000568219 ALKBH7Q9BT30 221 aaPredicted RBP9.28□□□□□ -0.92
PALB2-206ENST00000568219 DEPPQ9NTK1 212 aa9.28□□□□□ -0.92
PALB2-206ENST00000568219 DUSP13Q9UII6 198 aa9.28□□□□□ -0.92
PALB2-206ENST00000568219 FZR1Q9UM11 496 aa9.28□□□□□ -0.92
PALB2-206ENST00000568219 PIAS2O75928 621 aa9.27□□□□□ -0.92
PALB2-206ENST00000568219 CCL1P22362 96 aa9.27□□□□□ -0.92
PALB2-206ENST00000568219 PQLC2Q6ZP29 291 aa9.27□□□□□ -0.92
PALB2-206ENST00000568219 OR2D3Q8NGH3 330 aa9.27□□□□□ -0.92
PALB2-206ENST00000568219 MBD3L1Q8WWY6 194 aa9.27□□□□□ -0.92
PALB2-206ENST00000568219 SIGLEC12Q96PQ1 595 aa9.27□□□□□ -0.92
PALB2-206ENST00000568219 NRN1Q9NPD7 142 aa9.27□□□□□ -0.92
PALB2-206ENST00000568219 FBLL1A6NHQ2 334 aaKnown RBP9.27□□□□□ -0.93
PALB2-206ENST00000568219 S1PR2O95136 353 aa9.27□□□□□ -0.93
PALB2-206ENST00000568219 FOLR3P41439 243 aa9.27□□□□□ -0.93
PALB2-206ENST00000568219 UCP2P55851 309 aa9.27□□□□□ -0.93
PALB2-206ENST00000568219 RELQ04864 619 aaPredicted RBP9.27□□□□□ -0.93
PALB2-206ENST00000568219 TNFSF13O75888 250 aa9.27□□□□□ -0.93
PALB2-206ENST00000568219 RAC3P60763 192 aa9.27□□□□□ -0.93
PALB2-206ENST00000568219 LCN2P80188 198 aa9.27□□□□□ -0.93
PALB2-206ENST00000568219 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.27□□□□□ -0.93
PALB2-206ENST00000568219 GUSBP11Q6P575 273 aa9.27□□□□□ -0.93
PALB2-206ENST00000568219 ABHD12Q8N2K0 398 aa9.27□□□□□ -0.93
PALB2-206ENST00000568219 OCC1Q8TAD7 63 aa9.27□□□□□ -0.93
PALB2-206ENST00000568219 FGFBP3Q8TAT2 258 aa9.27□□□□□ -0.93
PALB2-206ENST00000568219 PAX9P55771 341 aa9.26□□□□□ -0.93
PALB2-206ENST00000568219 GABRA6Q16445 453 aa9.26□□□□□ -0.93
PALB2-206ENST00000568219 RABEPKQ7Z6M1 372 aa9.26□□□□□ -0.93
PALB2-206ENST00000568219 DRAM1Q8N682 238 aa9.26□□□□□ -0.93
PALB2-206ENST00000568219 OR1L1Q8NH94 360 aa9.26□□□□□ -0.93
PALB2-206ENST00000568219 RNASEH2CQ8TDP1 164 aaKnown RBP9.26□□□□□ -0.93
PALB2-206ENST00000568219 ZNF501Q96CX3 271 aaPredicted RBP9.26□□□□□ -0.93
PALB2-206ENST00000568219 NPCDR1Q9BY65 106 aa9.26□□□□□ -0.93
PALB2-206ENST00000568219 DLL3Q9NYJ7 618 aa9.26□□□□□ -0.93
PALB2-206ENST00000568219 NBASA2RRP1 2371 aa9.26□□□□□ -0.93
PALB2-206ENST00000568219 NPIPB13A6NJU9 1138 aa9.26□□□□□ -0.93
PALB2-206ENST00000568219 NPIPB4C9JG80 1138 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms