RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 FABP7O15540 132 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 RAMP3O60896 148 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 SPDEFO95238 335 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 APOA2P02652 100 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 IGKV1-16P04430 117 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 TFAP2AP05549 437 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 FCGR3AP08637 254 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 OR8U8P0C7N1 319 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 GSTT2P0CG29 244 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 GSTT2BP0CG30 244 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 HIST1H1DP16402 221 aaKnown RBP3.73□□□□□ -1.81
CLK3-219ENST00000567805 GNB3P16520 340 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 PSMB9P28065 219 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 HOXD3P31249 432 aaPredicted RBP3.73□□□□□ -1.81
CLK3-219ENST00000567805 TALDO1P37837 337 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 RAB9AP51151 201 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 NDPQ00604 133 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 RUNX1Q01196 453 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 TMEM267Q0VDI3 215 aaPredicted RBP3.73□□□□□ -1.81
CLK3-219ENST00000567805 DCTN2Q13561 401 aaKnown RBP3.73□□□□□ -1.81
CLK3-219ENST00000567805 FHL3Q13643 280 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 KIAA0141Q14154 515 aaPredicted RBP3.73□□□□□ -1.81
CLK3-219ENST00000567805 ARL6IP1Q15041 203 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 MOGAT2Q3SYC2 334 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 AKIRIN2Q53H80 203 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 C19orf54Q5BKX5 351 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 C9orf66Q5T8R8 295 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 C22orf42Q6IC83 251 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 PYHIN1Q6K0P9 492 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 ZNF562Q6V9R5 426 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 Q6ZS49 121 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 TPRA1Q86W33 373 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 NR2C2APQ86WQ0 139 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 PDPNQ86YL7 162 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 ZNF491Q8N8L2 437 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 ZNF383Q8NA42 475 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 MINDY2Q8NBR6 621 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 OR11H1Q8NG94 326 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 OR10J5Q8NHC4 309 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 WDR89Q96FK6 387 aaPredicted RBP3.73□□□□□ -1.81
CLK3-219ENST00000567805 TSNAXQ99598 290 aaKnown RBP3.73□□□□□ -1.81
CLK3-219ENST00000567805 CABLES2Q9BTV7 478 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 KLK15Q9H2R5 256 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 FBXL15Q9H469 300 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 TXNL4BQ9NX01 149 aaKnown RBP3.73□□□□□ -1.81
CLK3-219ENST00000567805 RNF150Q9ULK6 438 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 STUB1Q9UNE7 303 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 GAB2Q9UQC2 676 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 FOXA2Q9Y261 457 aaPredicted RBP3.73□□□□□ -1.81
CLK3-219ENST00000567805 VSIG4Q9Y279 399 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 WSB1Q9Y6I7 421 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 A0A075B6Q4 140 aa3.72□□□□□ -1.81
CLK3-219ENST00000567805 A0A0B4J203 849 aa3.72□□□□□ -1.81
CLK3-219ENST00000567805 A0A1W2PN81 502 aa3.72□□□□□ -1.81
CLK3-219ENST00000567805 SEC14L6B5MCN3 397 aa3.72□□□□□ -1.81
CLK3-219ENST00000567805 I3L521 148 aa3.72□□□□□ -1.81
CLK3-219ENST00000567805 M0R1X1 148 aa3.72□□□□□ -1.81
CLK3-219ENST00000567805 FCN1O00602 326 aa3.72□□□□□ -1.81
CLK3-219ENST00000567805 SOX15O60248 233 aa3.72□□□□□ -1.81
CLK3-219ENST00000567805 PROP1O75360 226 aa3.72□□□□□ -1.81
CLK3-219ENST00000567805 SCGNO76038 276 aa3.72□□□□□ -1.81
CLK3-219ENST00000567805 OR8U9P0C7N5 309 aa3.72□□□□□ -1.81
CLK3-219ENST00000567805 DTYMKP23919 212 aa3.72□□□□□ -1.81
CLK3-219ENST00000567805 CD40LGP29965 261 aa3.72□□□□□ -1.81
CLK3-219ENST00000567805 CHRNA7P36544 502 aa3.72□□□□□ -1.81
CLK3-219ENST00000567805 SCAND1P57086 179 aa3.72□□□□□ -1.81
CLK3-219ENST00000567805 RPS16P62249 146 aaKnown RBP3.72□□□□□ -1.81
CLK3-219ENST00000567805 CX3CL1P78423 397 aa3.72□□□□□ -1.81
CLK3-219ENST00000567805 DGCR2P98153 550 aa3.72□□□□□ -1.81
CLK3-219ENST00000567805 ZNF616Q08AN1 781 aa3.72□□□□□ -1.81
CLK3-219ENST00000567805 CBX3Q13185 183 aa3.72□□□□□ -1.81
CLK3-219ENST00000567805 ARFRP1Q13795 201 aa3.72□□□□□ -1.81
CLK3-219ENST00000567805 PSG5Q15238 335 aa3.72□□□□□ -1.81
CLK3-219ENST00000567805 ECSCRQ19T08 205 aa3.72□□□□□ -1.81
CLK3-219ENST00000567805 ACTBL2Q562R1 376 aa3.72□□□□□ -1.81
CLK3-219ENST00000567805 IGSF11Q5DX21 431 aa3.72□□□□□ -1.81
CLK3-219ENST00000567805 ZNF773Q6PK81 442 aa3.72□□□□□ -1.81
CLK3-219ENST00000567805 PPP1R27Q86WC6 154 aa3.72□□□□□ -1.81
CLK3-219ENST00000567805 DRAXINQ8NBI3 349 aaPredicted RBP3.72□□□□□ -1.81
CLK3-219ENST00000567805 ABHD5Q8WTS1 349 aa3.72□□□□□ -1.81
CLK3-219ENST00000567805 FLYWCH2Q96CP2 140 aaKnown RBP3.72□□□□□ -1.81
CLK3-219ENST00000567805 GINS4Q9BRT9 223 aa3.72□□□□□ -1.81
CLK3-219ENST00000567805 ATG5Q9H1Y0 275 aa3.72□□□□□ -1.81
CLK3-219ENST00000567805 OR2D2Q9H210 308 aa3.72□□□□□ -1.81
CLK3-219ENST00000567805 GNB4Q9HAV0 340 aa3.72□□□□□ -1.81
CLK3-219ENST00000567805 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.72□□□□□ -1.81
CLK3-219ENST00000567805 SLC35D1Q9NTN3 355 aa3.72□□□□□ -1.81
CLK3-219ENST00000567805 SDHAF2Q9NX18 166 aa3.72□□□□□ -1.81
CLK3-219ENST00000567805 METTL1Q9UBP6 276 aaKnown RBP3.72□□□□□ -1.81
CLK3-219ENST00000567805 ZNF230Q9UIE0 474 aaPredicted RBP3.72□□□□□ -1.81
CLK3-219ENST00000567805 SSR3Q9UNL2 185 aa3.72□□□□□ -1.81
CLK3-219ENST00000567805 FBXO7Q9Y3I1 522 aa3.72□□□□□ -1.81
CLK3-219ENST00000567805 RBM7Q9Y580 266 aaKnown RBP3.72□□□□□ -1.81
CLK3-219ENST00000567805 NUBP2Q9Y5Y2 271 aa3.72□□□□□ -1.81
CLK3-219ENST00000567805 A3GALT2U3KPV4 340 aa3.72□□□□□ -1.81
CLK3-219ENST00000567805 DNAH7Q8WXX0 4024 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 SMIM30A4D0T7 59 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 SHOXO15266 292 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 SLC25A17O43808 307 aa3.71□□□□□ -1.82
CLK3-219ENST00000567805 SLC22A5O76082 557 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms