RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 NDUFB3O43676 98 aa10.65□□□□□ -0.7
CSPG4P13-202ENST00000567704 SMIM17P0DL12 118 aa10.65□□□□□ -0.7
CSPG4P13-202ENST00000567704 ADCYAP1P18509 176 aa10.65□□□□□ -0.7
CSPG4P13-202ENST00000567704 GCSHP23434 173 aa10.65□□□□□ -0.7
CSPG4P13-202ENST00000567704 STARD6P59095 220 aa10.65□□□□□ -0.7
CSPG4P13-202ENST00000567704 SPINK14Q6IE38 97 aa10.65□□□□□ -0.7
CSPG4P13-202ENST00000567704 CARFQ8N187 725 aa10.65□□□□□ -0.7
CSPG4P13-202ENST00000567704 ST6GALNAC6Q969X2 333 aa10.65□□□□□ -0.7
CSPG4P13-202ENST00000567704 TMEM45BQ96B21 275 aa10.65□□□□□ -0.7
CSPG4P13-202ENST00000567704 SSBP3Q9BWW4 388 aaPredicted RBP10.65□□□□□ -0.7
CSPG4P13-202ENST00000567704 MAS1LP35410 378 aa10.65□□□□□ -0.7
CSPG4P13-202ENST00000567704 C3AR1Q16581 482 aa10.65□□□□□ -0.7
CSPG4P13-202ENST00000567704 ZNF576Q9H609 170 aa10.65□□□□□ -0.7
CSPG4P13-202ENST00000567704 IGKV1D-43A0A0B4J1Z2 117 aa10.65□□□□□ -0.7
CSPG4P13-202ENST00000567704 FAM90A26D6RGX4 464 aa10.65□□□□□ -0.7
CSPG4P13-202ENST00000567704 LIFP15018 202 aa10.65□□□□□ -0.7
CSPG4P13-202ENST00000567704 IGFBP3P17936 291 aaPredicted RBP10.65□□□□□ -0.7
CSPG4P13-202ENST00000567704 RPL23P62829 140 aaKnown RBP10.65□□□□□ -0.7
CSPG4P13-202ENST00000567704 NUDT3O95989 172 aa10.65□□□□□ -0.71
CSPG4P13-202ENST00000567704 COL11A1P12107 1806 aaPredicted RBP10.65□□□□□ -0.71
CSPG4P13-202ENST00000567704 TNXAQ16473 311 aa10.65□□□□□ -0.71
CSPG4P13-202ENST00000567704 DOLPP1Q86YN1 238 aa10.65□□□□□ -0.71
CSPG4P13-202ENST00000567704 SPSB4Q96A44 273 aa10.65□□□□□ -0.71
CSPG4P13-202ENST00000567704 PERPQ96FX8 193 aa10.65□□□□□ -0.71
CSPG4P13-202ENST00000567704 LAMTOR2Q9Y2Q5 125 aa10.65□□□□□ -0.71
CSPG4P13-202ENST00000567704 SIPA1L1O43166 1804 aa10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 C2CD4DB7Z1M9 353 aa10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 PLAUP00749 431 aa10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 SRFP11831 508 aa10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 CD40P25942 277 aa10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 STXBP6Q8NFX7 210 aa10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 TMEM170AQ8WVE7 144 aa10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 SPOCK3Q9BQ16 436 aa10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 SDK2Q58EX2 2172 aa10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 hADV38S2A0JD32 116 aa10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 HLA-DRB1P01911 266 aa10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 AMBPP02760 352 aa10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 IFI6P09912 130 aa10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 NUTF2P61970 127 aaKnown RBP10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 IL11RAQ14626 422 aa10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 LRRC10Q5BKY1 277 aa10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 NIT1Q86X76 327 aa10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 VSTM2AQ8TAG5 236 aa10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 APC2O95996 2303 aa10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 LOC390937A0A1W2PQ73 354 aa10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 K7N7A8 449 aa10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 ORM1P02763 201 aa10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 APELAP0DMC3 54 aa10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 RPL31P62899 125 aaKnown RBP10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 C1orf53Q5VUE5 145 aa10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 FAM19A2Q8N3H0 131 aa10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 OR1L1Q8NH94 360 aa10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 SMIM12Q96EX1 92 aa10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 DLL3Q9NYJ7 618 aa10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 OR2T8A6NH00 312 aa10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 LDLRAD4O15165 306 aa10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 NUBP1P53384 320 aa10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 NXPH1P58417 271 aa10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 LINC00114Q6XXX2 140 aa10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 PRNTQ86SH4 94 aa10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 ZADH2Q8N4Q0 377 aa10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 SGK494Q96LW2 274 aa10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 HARBI1Q96MB7 349 aa10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 OR51B2Q9Y5P1 312 aa10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 BRCA1P38398 1863 aaKnown RBP10.64□□□□□ -0.71
CSPG4P13-202ENST00000567704 IGHV1OR15-9A0A0B4J2B8 117 aa10.63□□□□□ -0.71
CSPG4P13-202ENST00000567704 ATXN7O15265 892 aaPredicted RBP10.63□□□□□ -0.71
CSPG4P13-202ENST00000567704 SERF1AO75920 110 aa10.63□□□□□ -0.71
CSPG4P13-202ENST00000567704 OR2H2O95918 312 aa10.63□□□□□ -0.71
CSPG4P13-202ENST00000567704 TNFRSF1AP19438 455 aa10.63□□□□□ -0.71
CSPG4P13-202ENST00000567704 SLC25A40Q8TBP6 338 aa10.63□□□□□ -0.71
CSPG4P13-202ENST00000567704 LSM10Q969L4 123 aaKnown RBP10.63□□□□□ -0.71
CSPG4P13-202ENST00000567704 SMOC1Q9H4F8 434 aa10.63□□□□□ -0.71
CSPG4P13-202ENST00000567704 WFDC1Q9HC57 220 aa10.63□□□□□ -0.71
CSPG4P13-202ENST00000567704 SPTA1P02549 2419 aa10.63□□□□□ -0.71
CSPG4P13-202ENST00000567704 TDRD15B5MCY1 1934 aaKnown RBP10.63□□□□□ -0.71
CSPG4P13-202ENST00000567704 GREB1LQ9C091 1923 aaPredicted RBP10.63□□□□□ -0.71
CSPG4P13-202ENST00000567704 TRBV9A0A0B4J1U6 114 aa10.63□□□□□ -0.71
CSPG4P13-202ENST00000567704 IGHV3-21A0A0B4J1V1 117 aa10.63□□□□□ -0.71
CSPG4P13-202ENST00000567704 FAM90A10PA6NDY2 464 aa10.63□□□□□ -0.71
CSPG4P13-202ENST00000567704 FAM90A18PA6NE21 464 aa10.63□□□□□ -0.71
CSPG4P13-202ENST00000567704 FAM90A16PA6NEW6 464 aa10.63□□□□□ -0.71
CSPG4P13-202ENST00000567704 FAM90A20PA6NIJ5 464 aa10.63□□□□□ -0.71
CSPG4P13-202ENST00000567704 FAM90A8PA6NJQ4 464 aa10.63□□□□□ -0.71
CSPG4P13-202ENST00000567704 FAM90A7PA6NKC0 464 aa10.63□□□□□ -0.71
CSPG4P13-202ENST00000567704 FAM90A22PA8MWA6 464 aa10.63□□□□□ -0.71
CSPG4P13-202ENST00000567704 FAM90A12PA8MX19 464 aa10.63□□□□□ -0.71
CSPG4P13-202ENST00000567704 FAM90A5PA8MXJ8 464 aa10.63□□□□□ -0.71
CSPG4P13-202ENST00000567704 FAM90A23PA8MXZ1 464 aa10.63□□□□□ -0.71
CSPG4P13-202ENST00000567704 M0R296 226 aa10.63□□□□□ -0.71
CSPG4P13-202ENST00000567704 FAM90A15PP0C7V4 464 aa10.63□□□□□ -0.71
CSPG4P13-202ENST00000567704 FAM90A13PP0C7W8 464 aa10.63□□□□□ -0.71
CSPG4P13-202ENST00000567704 FAM90A14PP0C7W9 464 aa10.63□□□□□ -0.71
CSPG4P13-202ENST00000567704 FAM90A24PP0C7X0 464 aa10.63□□□□□ -0.71
CSPG4P13-202ENST00000567704 STAG3L2P0CL84 134 aa10.63□□□□□ -0.71
CSPG4P13-202ENST00000567704 BTF3P20290 206 aaKnown RBP10.63□□□□□ -0.71
CSPG4P13-202ENST00000567704 LRRC75BQ2VPJ9 315 aa10.63□□□□□ -0.71
CSPG4P13-202ENST00000567704 TCF23Q7RTU1 214 aa10.63□□□□□ -0.71
CSPG4P13-202ENST00000567704 PGLYRP4Q96LB8 373 aa10.63□□□□□ -0.71
CSPG4P13-202ENST00000567704 TMEM106BQ9NUM4 274 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms