RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 CPSF4O95639 269 aaKnown RBP2.03□□□□□ -2.08
SHCBP1-206ENST00000567698 OR5G3P0C626 314 aa2.03□□□□□ -2.08
SHCBP1-206ENST00000567698 CTSEP14091 401 aa2.03□□□□□ -2.08
SHCBP1-206ENST00000567698 MARCKSL1P49006 195 aa2.03□□□□□ -2.08
SHCBP1-206ENST00000567698 LINC00313P59037 77 aa2.03□□□□□ -2.08
SHCBP1-206ENST00000567698 ARPC4P59998 168 aa2.03□□□□□ -2.08
SHCBP1-206ENST00000567698 SNAP25P60880 206 aa2.03□□□□□ -2.08
SHCBP1-206ENST00000567698 PSME3P61289 254 aa2.03□□□□□ -2.08
SHCBP1-206ENST00000567698 HLA-DRB3P79483 266 aa2.03□□□□□ -2.08
SHCBP1-206ENST00000567698 SARNPP82979 210 aaKnown RBP2.03□□□□□ -2.08
SHCBP1-206ENST00000567698 FABP5Q01469 135 aa2.03□□□□□ -2.08
SHCBP1-206ENST00000567698 TNFRSF9Q07011 255 aa2.03□□□□□ -2.08
SHCBP1-206ENST00000567698 PMAIP1Q13794 54 aa2.03□□□□□ -2.08
SHCBP1-206ENST00000567698 SPA17Q15506 151 aa2.03□□□□□ -2.08
SHCBP1-206ENST00000567698 HIST2H3PS2Q5TEC6 136 aa2.03□□□□□ -2.08
SHCBP1-206ENST00000567698 ZNF660Q6AZW8 331 aaPredicted RBP2.03□□□□□ -2.08
SHCBP1-206ENST00000567698 AMMECR1LQ6DCA0 310 aa2.03□□□□□ -2.08
SHCBP1-206ENST00000567698 SLC36A1Q7Z2H8 476 aa2.03□□□□□ -2.08
SHCBP1-206ENST00000567698 ATP5L2Q7Z4Y8 100 aa2.03□□□□□ -2.08
SHCBP1-206ENST00000567698 TMEM144Q7Z5S9 345 aa2.03□□□□□ -2.08
SHCBP1-206ENST00000567698 SLC35F6Q8N357 371 aa2.03□□□□□ -2.08
SHCBP1-206ENST00000567698 OR5K1Q8NHB7 308 aa2.03□□□□□ -2.08
SHCBP1-206ENST00000567698 YPEL4Q96NS1 127 aa2.03□□□□□ -2.08
SHCBP1-206ENST00000567698 PPP1R2P1Q96PQ5 205 aa2.03□□□□□ -2.08
SHCBP1-206ENST00000567698 PHB2Q99623 299 aa2.03□□□□□ -2.08
SHCBP1-206ENST00000567698 CENPHQ9H3R5 247 aa2.03□□□□□ -2.08
SHCBP1-206ENST00000567698 TRABDQ9H4I3 376 aa2.03□□□□□ -2.08
SHCBP1-206ENST00000567698 ARMC1Q9NVT9 282 aa2.03□□□□□ -2.08
SHCBP1-206ENST00000567698 MRPL27Q9P0M9 148 aaKnown RBP2.03□□□□□ -2.08
SHCBP1-206ENST00000567698 TMEM216Q9P0N5 145 aa2.03□□□□□ -2.08
SHCBP1-206ENST00000567698 LINC00527Q9UJ94 153 aa2.03□□□□□ -2.08
SHCBP1-206ENST00000567698 HHLA2Q9UM44 414 aa2.03□□□□□ -2.08
SHCBP1-206ENST00000567698 NLRC5Q86WI3 1866 aa2.03□□□□□ -2.09
SHCBP1-206ENST00000567698 ZNF532Q9HCE3 1301 aa2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 OR4C46A6NHA9 309 aa2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 ARGFXA6NJG6 315 aa2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 INMT-MINDY4F8WBC2 141 aa2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 H3BQ85 93 aa2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 K7EPK0 472 aa2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 BHLHE40O14503 412 aa2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 NOS1APO75052 506 aaPredicted RBP2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 STK16O75716 305 aa2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 CRYBA1P05813 215 aa2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 CRYGDP07320 174 aa2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 SNRPAP09012 282 aaKnown RBP2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 FBP1P09467 338 aa2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 OR13C7P0DN81 318 aa2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 GTF2F2P13984 249 aa2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 CNTFRP26992 372 aa2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 ELK4P28324 431 aa2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 HSPA9P38646 679 aaKnown RBP2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 OR1E2P47887 323 aa2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 PSMB3P49720 205 aa2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 EBPQ15125 230 aaKnown RBP2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 FAM201AQ5SY85 155 aa2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 N4BP2L1Q5TBK1 243 aaPredicted RBP2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 SMARCD3Q6STE5 483 aa2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 TMED4Q7Z7H5 227 aa2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 DEFB125Q8N687 156 aa2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 OR2D3Q8NGH3 330 aa2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 OR5H2Q8NGV7 314 aa2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 KLK6Q92876 244 aa2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 MAL2Q969L2 176 aa2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 APOBEC3DQ96AK3 386 aaPredicted RBP2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 REEP6Q96HR9 211 aa2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 DIRAS2Q96HU8 199 aa2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 OR7D2Q96RA2 312 aa2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 THTPAQ9BU02 230 aa2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 TSSK6Q9BXA6 273 aa2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 PLA2G12AQ9BZM1 189 aa2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 CMTM6Q9NX76 183 aa2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 ITGB4P16144 1822 aa2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 THSD7AQ9UPZ6 1657 aa2.02□□□□□ -2.09
SHCBP1-206ENST00000567698 PIK3C2GO75747 1445 aa2.01□□□□□ -2.09
SHCBP1-206ENST00000567698 NCOA1Q15788 1441 aa2.01□□□□□ -2.09
SHCBP1-206ENST00000567698 MTUS2Q5JR59 1369 aa2.01□□□□□ -2.09
SHCBP1-206ENST00000567698 DHX57Q6P158 1386 aaKnown RBP2.01□□□□□ -2.09
SHCBP1-206ENST00000567698 TMED7-TICAM2A0A0A6YYA0 188 aa2.01□□□□□ -2.09
SHCBP1-206ENST00000567698 GNG14A0A1W2PPG7 69 aa2.01□□□□□ -2.09
SHCBP1-206ENST00000567698 C5orf49A4QMS7 147 aa2.01□□□□□ -2.09
SHCBP1-206ENST00000567698 COPEO14579 308 aa2.01□□□□□ -2.09
SHCBP1-206ENST00000567698 MRASO14807 208 aa2.01□□□□□ -2.09
SHCBP1-206ENST00000567698 LTAP01374 205 aa2.01□□□□□ -2.09
SHCBP1-206ENST00000567698 IGHMP01871 453 aa2.01□□□□□ -2.09
SHCBP1-206ENST00000567698 TTRP02766 147 aa2.01□□□□□ -2.09
SHCBP1-206ENST00000567698 SCGB1C2P0DMR2 95 aa2.01□□□□□ -2.09
SHCBP1-206ENST00000567698 FGF6P10767 208 aa2.01□□□□□ -2.09
SHCBP1-206ENST00000567698 CTLA4P16410 223 aa2.01□□□□□ -2.09
SHCBP1-206ENST00000567698 DDTP30046 118 aa2.01□□□□□ -2.09
SHCBP1-206ENST00000567698 INPP1P49441 399 aa2.01□□□□□ -2.09
SHCBP1-206ENST00000567698 DAPP51397 102 aa2.01□□□□□ -2.09
SHCBP1-206ENST00000567698 FOXA1P55317 472 aa2.01□□□□□ -2.09
SHCBP1-206ENST00000567698 KLF3P57682 345 aaPredicted RBP2.01□□□□□ -2.09
SHCBP1-206ENST00000567698 HERVK_113P63121 156 aa2.01□□□□□ -2.09
SHCBP1-206ENST00000567698 POU6F1Q14863 301 aa2.01□□□□□ -2.09
SHCBP1-206ENST00000567698 LIN52Q52LA3 116 aa2.01□□□□□ -2.09
SHCBP1-206ENST00000567698 PYCR3Q53H96 274 aa2.01□□□□□ -2.09
SHCBP1-206ENST00000567698 TRIQKQ629K1 86 aa2.01□□□□□ -2.09
SHCBP1-206ENST00000567698 LAIR2Q6ISS4 152 aa2.01□□□□□ -2.09
SHCBP1-206ENST00000567698 LPCAT3Q6P1A2 487 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms