RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 TMBIM4Q9HC24 238 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 IFT46Q9NQC8 304 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 SLC2A9Q9NRM0 540 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 RMND1Q9NWS8 449 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 TAAR3PQ9P1P4 343 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 NXT1Q9UKK6 140 aaKnown RBP-0.12□□□□□ -2.43
CDH1-211ENST00000567320 RABL2BQ9UNT1 228 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 POFUT2Q9Y2G5 429 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 ZFP30Q9Y2G7 519 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 SNX24Q9Y343 169 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 POLR3HQ9Y535 204 aaPredicted RBP-0.12□□□□□ -2.43
CDH1-211ENST00000567320 GMEB1Q9Y692 573 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 TONSLQ96HA7 1378 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 HECW2Q9P2P5 1572 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 NCOA6Q14686 2063 aaPredicted RBP-0.12□□□□□ -2.43
CDH1-211ENST00000567320 HEATR5BQ9P2D3 2071 aa-0.12□□□□□ -2.43
CDH1-211ENST00000567320 BAZ2BQ9UIF8 2168 aaKnown RBP-0.12□□□□□ -2.43
CDH1-211ENST00000567320 PTPRSQ13332 1948 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 SSPOA2VEC9 5147 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 INTS1Q8N201 2190 aaKnown RBP-0.13□□□□□ -2.43
CDH1-211ENST00000567320 PTPRBP23467 1997 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 MAST2Q6P0Q8 1798 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 ADGRB2O60241 1585 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 A0A087WUU8 490 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 TRBV6-7A0A0A0MS04 114 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 TMED7-TICAM2A0A0A6YYA0 188 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 IGHV1-18A0A0C4DH31 117 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 A0A1B0GW15 77 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 A0A1B0GX12 115 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 A0A1W2PPV4 95 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 TRAPPC13A5PLN9 417 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 OR51F1A6NGY5 319 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 M0QYV0 167 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 M0R381 172 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 MRASO14807 208 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 KLRC4O43908 158 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 ADAP1O75689 374 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 SERPINA7P05543 415 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 CRYGCP07315 174 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 TFPTP0C1Z6 253 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 HIST1H1CP16403 213 aaKnown RBP-0.13□□□□□ -2.43
CDH1-211ENST00000567320 CXCL2P19875 107 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 CXCL3P19876 107 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 F8A1P23610 371 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 GADD45AP24522 165 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 CD24P25063 80 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 ADORA1P30542 326 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 OR10J1P30954 320 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 CA5AP35218 305 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 RPA3P35244 121 aaPredicted RBP-0.13□□□□□ -2.43
CDH1-211ENST00000567320 OPRM1P35372 400 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 IFNGR2P38484 337 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 HSPA9P38646 679 aaKnown RBP-0.13□□□□□ -2.43
CDH1-211ENST00000567320 OR1E2P47887 323 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 REG1BP48304 166 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 EVX1P49640 407 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 ETV1P50549 477 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 PSMD7P51665 324 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 EFNA4P52798 201 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 STC1P52823 247 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 RBM11P57052 281 aaKnown RBP-0.13□□□□□ -2.43
CDH1-211ENST00000567320 TAS2R45P59539 299 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 UBE2KP61086 200 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 TSPAN5P62079 268 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 HERVK_113P63121 156 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 CD164Q04900 197 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 TMEM267Q0VDI3 215 aaPredicted RBP-0.13□□□□□ -2.43
CDH1-211ENST00000567320 ELOBQ15370 118 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 KISS1Q15726 138 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 TBC1D28Q2M2D7 210 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 PLPPR5Q32ZL2 321 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 KRTAP6-1Q3LI64 71 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 ACSM3Q53FZ2 586 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 OR10J3Q5JRS4 329 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 TEX36Q5VZQ5 186 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 PID1Q7Z2X4 250 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 ATP5L2Q7Z4Y8 100 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 GPHB5Q86YW7 130 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 BAP18Q8IXM2 172 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 SYS1Q8N2H4 156 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 RIBC1Q8N443 379 aaPredicted RBP-0.13□□□□□ -2.43
CDH1-211ENST00000567320 C17orf78Q8N4C9 275 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 DAND5Q8N907 189 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 OR5B17Q8NGF7 314 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 AGR3Q8TD06 166 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 ZNF675Q8TD23 568 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 TNFAIP8L1Q8WVP5 186 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 SLC7A6Q92536 515 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 ACY3Q96HD9 319 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 BCL7BQ9BQE9 202 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 HINT2Q9BX68 163 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 OR51B6Q9H340 312 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 PLAC8Q9NZF1 115 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 MAT2BQ9NZL9 334 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 TP73-AS1Q9UF72 201 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 MRM2Q9UI43 246 aaKnown RBP-0.13□□□□□ -2.43
CDH1-211ENST00000567320 LINC00527Q9UJ94 153 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 ENPP5Q9UJA9 477 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 COQ4Q9Y3A0 265 aa-0.13□□□□□ -2.43
CDH1-211ENST00000567320 TIMM22Q9Y584 194 aa-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms