RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 PPP1R35Q8TAP8 253 aa19.45■□□□□ 0.7
LINC00543-201ENST00000567234 C20orf24Q9BUV8 137 aa19.45■□□□□ 0.7
LINC00543-201ENST00000567234 SH3BGRL2Q9UJC5 107 aa19.45■□□□□ 0.7
LINC00543-201ENST00000567234 EGR1P18146 543 aa19.44■□□□□ 0.7
LINC00543-201ENST00000567234 HNF4GQ14541 408 aa19.44■□□□□ 0.7
LINC00543-201ENST00000567234 ZNF266Q14584 549 aa19.44■□□□□ 0.7
LINC00543-201ENST00000567234 NMSQ5H8A3 153 aa19.44■□□□□ 0.7
LINC00543-201ENST00000567234 OR10D4PQ8NGN7 298 aa19.44■□□□□ 0.7
LINC00543-201ENST00000567234 RNASEH2CQ8TDP1 164 aaKnown RBP19.44■□□□□ 0.7
LINC00543-201ENST00000567234 CACNA1DQ01668 2161 aa19.44■□□□□ 0.7
LINC00543-201ENST00000567234 NKX2-6A6NCS4 301 aa19.44■□□□□ 0.7
LINC00543-201ENST00000567234 RBFOX3A6NFN3 312 aa19.44■□□□□ 0.7
LINC00543-201ENST00000567234 SPRY3O43610 288 aa19.44■□□□□ 0.7
LINC00543-201ENST00000567234 HIST1H2BKO60814 126 aa19.44■□□□□ 0.7
LINC00543-201ENST00000567234 ZNF737O75373 536 aa19.44■□□□□ 0.7
LINC00543-201ENST00000567234 IGLV2-14P01704 120 aa19.44■□□□□ 0.7
LINC00543-201ENST00000567234 HIST1H2BJP06899 126 aa19.44■□□□□ 0.7
LINC00543-201ENST00000567234 HIST1H2BOP23527 126 aa19.44■□□□□ 0.7
LINC00543-201ENST00000567234 IL2RGP31785 369 aa19.44■□□□□ 0.7
LINC00543-201ENST00000567234 HIST1H2BBP33778 126 aa19.44■□□□□ 0.7
LINC00543-201ENST00000567234 GABRA2P47869 451 aa19.44■□□□□ 0.7
LINC00543-201ENST00000567234 GLIPR1P48060 266 aa19.44■□□□□ 0.7
LINC00543-201ENST00000567234 HIST1H2BDP58876 126 aa19.44■□□□□ 0.7
LINC00543-201ENST00000567234 HIST1H2BCP62807 126 aa19.44■□□□□ 0.7
LINC00543-201ENST00000567234 HIST2H2BEQ16778 126 aa19.44■□□□□ 0.7
LINC00543-201ENST00000567234 ZNF674Q2M3X9 581 aa19.44■□□□□ 0.7
LINC00543-201ENST00000567234 HIST2H2BFQ5QNW6 126 aaPredicted RBP19.44■□□□□ 0.7
LINC00543-201ENST00000567234 ZBTB34Q8NCN2 500 aa19.44■□□□□ 0.7
LINC00543-201ENST00000567234 ITLN1Q8WWA0 313 aa19.44■□□□□ 0.7
LINC00543-201ENST00000567234 HIST1H2BHQ93079 126 aa19.44■□□□□ 0.7
LINC00543-201ENST00000567234 ERGIC1Q969X5 290 aa19.44■□□□□ 0.7
LINC00543-201ENST00000567234 HIST1H2BNQ99877 126 aa19.44■□□□□ 0.7
LINC00543-201ENST00000567234 HIST1H2BMQ99879 126 aa19.44■□□□□ 0.7
LINC00543-201ENST00000567234 IGKV1D-17A0A075B6S4 117 aa19.43■□□□□ 0.7
LINC00543-201ENST00000567234 TNFSF4P23510 183 aa19.43■□□□□ 0.7
LINC00543-201ENST00000567234 HOXA4Q00056 320 aaPredicted RBP19.43■□□□□ 0.7
LINC00543-201ENST00000567234 MSMO1Q15800 293 aa19.43■□□□□ 0.7
LINC00543-201ENST00000567234 MOGAT3Q86VF5 341 aa19.43■□□□□ 0.7
LINC00543-201ENST00000567234 RBMXL1Q96E39 390 aaKnown RBP19.43■□□□□ 0.7
LINC00543-201ENST00000567234 TVP23CQ96ET8 276 aa19.43■□□□□ 0.7
LINC00543-201ENST00000567234 SNX22Q96L94 193 aa19.43■□□□□ 0.7
LINC00543-201ENST00000567234 SSX3Q99909 188 aa19.43■□□□□ 0.7
LINC00543-201ENST00000567234 METRNQ9UJH8 293 aa19.43■□□□□ 0.7
LINC00543-201ENST00000567234 RBM7Q9Y580 266 aaKnown RBP19.43■□□□□ 0.7
LINC00543-201ENST00000567234 A0A087X0M5 115 aa19.42■□□□□ 0.7
LINC00543-201ENST00000567234 A0A1B0GX30 115 aa19.42■□□□□ 0.7
LINC00543-201ENST00000567234 H3BQ15 152 aa19.42■□□□□ 0.7
LINC00543-201ENST00000567234 DVL1O14640 695 aa19.42■□□□□ 0.7
LINC00543-201ENST00000567234 TNFSF12O43508 249 aa19.42■□□□□ 0.7
LINC00543-201ENST00000567234 HBZP02008 142 aa19.42■□□□□ 0.7
LINC00543-201ENST00000567234 THBDP07204 575 aa19.42■□□□□ 0.7
LINC00543-201ENST00000567234 PNRC1Q12796 327 aaPredicted RBP19.42■□□□□ 0.7
LINC00543-201ENST00000567234 WFDC8Q8IUA0 241 aa19.42■□□□□ 0.7
LINC00543-201ENST00000567234 OR1L1Q8NH94 360 aa19.42■□□□□ 0.7
LINC00543-201ENST00000567234 FBXO7Q9Y3I1 522 aa19.42■□□□□ 0.7
LINC00543-201ENST00000567234 PCNX1Q96RV3 2341 aa19.42■□□□□ 0.7
LINC00543-201ENST00000567234 DPRXA6NFQ7 191 aa19.41■□□□□ 0.7
LINC00543-201ENST00000567234 HBE1P02100 147 aa19.41■□□□□ 0.7
LINC00543-201ENST00000567234 SLC25A6P12236 298 aa19.41■□□□□ 0.7
LINC00543-201ENST00000567234 TAGLN2P37802 199 aaKnown RBP19.41■□□□□ 0.7
LINC00543-201ENST00000567234 UBE2KP61086 200 aa19.41■□□□□ 0.7
LINC00543-201ENST00000567234 GNMTQ14749 295 aa19.41■□□□□ 0.7
LINC00543-201ENST00000567234 SP5Q6BEB4 398 aaPredicted RBP19.41■□□□□ 0.7
LINC00543-201ENST00000567234 GPHA2Q96T91 129 aa19.41■□□□□ 0.7
LINC00543-201ENST00000567234 A0A1B0GV90 55 aa19.41■□□□□ 0.7
LINC00543-201ENST00000567234 RNF212BA8MTL3 300 aa19.41■□□□□ 0.7
LINC00543-201ENST00000567234 MGST3O14880 152 aa19.41■□□□□ 0.7
LINC00543-201ENST00000567234 IGHV1-46P01743 117 aa19.41■□□□□ 0.7
LINC00543-201ENST00000567234 SERPINE2P07093 398 aa19.41■□□□□ 0.7
LINC00543-201ENST00000567234 TNFAIP6P98066 277 aaPredicted RBP19.41■□□□□ 0.7
LINC00543-201ENST00000567234 ZNF506Q5JVG8 444 aa19.41■□□□□ 0.7
LINC00543-201ENST00000567234 Q8TCH9 128 aa19.41■□□□□ 0.7
LINC00543-201ENST00000567234 FAM222BQ8WU58 562 aa19.41■□□□□ 0.7
LINC00543-201ENST00000567234 RAB39BQ96DA2 213 aa19.41■□□□□ 0.7
LINC00543-201ENST00000567234 DIRC2Q96SL1 478 aa19.41■□□□□ 0.7
LINC00543-201ENST00000567234 NCOR1P1Q9H4R4 102 aa19.41■□□□□ 0.7
LINC00543-201ENST00000567234 LIN7CQ9NUP9 197 aaKnown RBP19.41■□□□□ 0.7
LINC00543-201ENST00000567234 PITPNC1Q9UKF7 332 aa19.41■□□□□ 0.7
LINC00543-201ENST00000567234 PUS1Q9Y606 427 aaKnown RBP eCLIP19.41■□□□□ 0.7
LINC00543-201ENST00000567234 ADH4P08319 380 aa19.4■□□□□ 0.7
LINC00543-201ENST00000567234 FGF7P21781 194 aa19.4■□□□□ 0.7
LINC00543-201ENST00000567234 NKX2-1P43699 371 aaPredicted RBP19.4■□□□□ 0.7
LINC00543-201ENST00000567234 RND2P52198 227 aa19.4■□□□□ 0.7
LINC00543-201ENST00000567234 CASP6P55212 293 aa19.4■□□□□ 0.7
LINC00543-201ENST00000567234 CR1LQ2VPA4 569 aa19.4■□□□□ 0.7
LINC00543-201ENST00000567234 SPRNQ5BIV9 151 aa19.4■□□□□ 0.7
LINC00543-201ENST00000567234 ZNF645Q8N7E2 425 aa19.4■□□□□ 0.7
LINC00543-201ENST00000567234 NINJ1Q92982 152 aa19.4■□□□□ 0.7
LINC00543-201ENST00000567234 NIPSNAP3BQ9BS92 247 aa19.4■□□□□ 0.7
LINC00543-201ENST00000567234 PLEKHF2Q9H8W4 249 aa19.4■□□□□ 0.7
LINC00543-201ENST00000567234 NGBQ9NPG2 151 aa19.4■□□□□ 0.7
LINC00543-201ENST00000567234 RNF7Q9UBF6 113 aa19.4■□□□□ 0.7
LINC00543-201ENST00000567234 COL6A6A6NMZ7 2263 aa19.4■□□□□ 0.7
LINC00543-201ENST00000567234 ADAM20O43506 726 aa19.39■□□□□ 0.7
LINC00543-201ENST00000567234 SRP19P09132 144 aaKnown RBP19.39■□□□□ 0.7
LINC00543-201ENST00000567234 OR13C7P0DN81 318 aa19.39■□□□□ 0.7
LINC00543-201ENST00000567234 GZMHP20718 246 aa19.39■□□□□ 0.7
LINC00543-201ENST00000567234 HTD2P86397 168 aa19.39■□□□□ 0.7
LINC00543-201ENST00000567234 KHDC3LQ587J8 217 aa19.39■□□□□ 0.7
LINC00543-201ENST00000567234 DRAM1Q8N682 238 aa19.39■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms