RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 C12orf4Q9NQ89 552 aa7.48□□□□□ -1.21
CAPN3-216ENST00000567071 IFT46Q9NQC8 304 aa7.48□□□□□ -1.21
CAPN3-216ENST00000567071 ZNF230Q9UIE0 474 aaPredicted RBP7.48□□□□□ -1.21
CAPN3-216ENST00000567071 VPS13DQ5THJ4 4388 aa7.48□□□□□ -1.21
CAPN3-216ENST00000567071 DYNC1H1Q14204 4646 aaKnown RBP7.47□□□□□ -1.21
CAPN3-216ENST00000567071 LINC00854A0A1B0GVQ3 168 aa7.47□□□□□ -1.21
CAPN3-216ENST00000567071 GABARAPH6UMI1 98 aa7.47□□□□□ -1.21
CAPN3-216ENST00000567071 K7N7A8 449 aa7.47□□□□□ -1.21
CAPN3-216ENST00000567071 CTDSPLO15194 276 aa7.47□□□□□ -1.21
CAPN3-216ENST00000567071 GSTZ1O43708 216 aaPredicted RBP7.47□□□□□ -1.21
CAPN3-216ENST00000567071 TPPPO94811 219 aa7.47□□□□□ -1.21
CAPN3-216ENST00000567071 IGHG2P01859 326 aa7.47□□□□□ -1.21
CAPN3-216ENST00000567071 TK1P04183 234 aa7.47□□□□□ -1.21
CAPN3-216ENST00000567071 FCGR3AP08637 254 aa7.47□□□□□ -1.21
CAPN3-216ENST00000567071 IL7P13232 177 aa7.47□□□□□ -1.21
CAPN3-216ENST00000567071 GDNFP39905 211 aa7.47□□□□□ -1.21
CAPN3-216ENST00000567071 CEACAM3P40198 252 aa7.47□□□□□ -1.21
CAPN3-216ENST00000567071 GPR12P47775 334 aa7.47□□□□□ -1.21
CAPN3-216ENST00000567071 EDDM3BP56851 147 aa7.47□□□□□ -1.21
CAPN3-216ENST00000567071 MRPS10P82664 201 aaKnown RBP7.47□□□□□ -1.21
CAPN3-216ENST00000567071 KRBOX4Q5JUW0 171 aa7.47□□□□□ -1.21
CAPN3-216ENST00000567071 RSBN1Q5VWQ0 802 aaPredicted RBP7.47□□□□□ -1.21
CAPN3-216ENST00000567071 ZNF57Q68EA5 555 aaPredicted RBP7.47□□□□□ -1.21
CAPN3-216ENST00000567071 CCDC144NLQ6NUI1 221 aa7.47□□□□□ -1.21
CAPN3-216ENST00000567071 GDPD3Q7L5L3 318 aa7.47□□□□□ -1.21
CAPN3-216ENST00000567071 GVQW1Q8N7I0 195 aa7.47□□□□□ -1.21
CAPN3-216ENST00000567071 RNF152Q8N8N0 203 aa7.47□□□□□ -1.21
CAPN3-216ENST00000567071 OR4K15Q8NH41 348 aa7.47□□□□□ -1.21
CAPN3-216ENST00000567071 MRPL30Q8TCC3 161 aaKnown RBP7.47□□□□□ -1.21
CAPN3-216ENST00000567071 CCDC107Q8WV48 283 aa7.47□□□□□ -1.21
CAPN3-216ENST00000567071 TRIM63Q969Q1 353 aa7.47□□□□□ -1.21
CAPN3-216ENST00000567071 NABP2Q9BQ15 211 aa7.47□□□□□ -1.21
CAPN3-216ENST00000567071 THAP7Q9BT49 309 aaPredicted RBP7.47□□□□□ -1.21
CAPN3-216ENST00000567071 CCDC32Q9BV29 185 aa7.47□□□□□ -1.21
CAPN3-216ENST00000567071 SCPEP1Q9HB40 452 aa7.47□□□□□ -1.21
CAPN3-216ENST00000567071 KLK11Q9UBX7 282 aa7.47□□□□□ -1.21
CAPN3-216ENST00000567071 KIF25Q9UIL4 384 aa7.47□□□□□ -1.21
CAPN3-216ENST00000567071 MEIKINA0A087WXM9 373 aa7.46□□□□□ -1.22
CAPN3-216ENST00000567071 TMEM30CPA0ZSE6 113 aa7.46□□□□□ -1.22
CAPN3-216ENST00000567071 LEUTXA8MZ59 168 aa7.46□□□□□ -1.22
CAPN3-216ENST00000567071 SULT1C2O00338 296 aa7.46□□□□□ -1.22
CAPN3-216ENST00000567071 MGST3O14880 152 aa7.46□□□□□ -1.22
CAPN3-216ENST00000567071 FGF16O43320 207 aa7.46□□□□□ -1.22
CAPN3-216ENST00000567071 CA11O75493 328 aa7.46□□□□□ -1.22
CAPN3-216ENST00000567071 UPK1BO75841 260 aa7.46□□□□□ -1.22
CAPN3-216ENST00000567071 CNIH1O95406 144 aa7.46□□□□□ -1.22
CAPN3-216ENST00000567071 NAPSAO96009 420 aa7.46□□□□□ -1.22
CAPN3-216ENST00000567071 GLAP06280 429 aa7.46□□□□□ -1.22
CAPN3-216ENST00000567071 GLP1RP43220 463 aa7.46□□□□□ -1.22
CAPN3-216ENST00000567071 GLIPR1P48060 266 aa7.46□□□□□ -1.22
CAPN3-216ENST00000567071 KCNJ3P48549 501 aa7.46□□□□□ -1.22
CAPN3-216ENST00000567071 INPP1P49441 399 aa7.46□□□□□ -1.22
CAPN3-216ENST00000567071 DLX6P56179 175 aa7.46□□□□□ -1.22
CAPN3-216ENST00000567071 OR52W1Q6IF63 320 aa7.46□□□□□ -1.22
CAPN3-216ENST00000567071 ZNF497Q6ZNH5 498 aa7.46□□□□□ -1.22
CAPN3-216ENST00000567071 C5orf24Q7Z6I8 188 aa7.46□□□□□ -1.22
CAPN3-216ENST00000567071 UBALD1Q8TB05 177 aa7.46□□□□□ -1.22
CAPN3-216ENST00000567071 ZNF596Q8TC21 504 aa7.46□□□□□ -1.22
CAPN3-216ENST00000567071 BORCS5Q969J3 196 aa7.46□□□□□ -1.22
CAPN3-216ENST00000567071 CREB3L1Q96BA8 519 aa7.46□□□□□ -1.22
CAPN3-216ENST00000567071 SEBOXQ9HB31 216 aaPredicted RBP7.46□□□□□ -1.22
CAPN3-216ENST00000567071 PGPEP1Q9NXJ5 209 aa7.46□□□□□ -1.22
CAPN3-216ENST00000567071 SIGLEC8Q9NYZ4 499 aa7.46□□□□□ -1.22
CAPN3-216ENST00000567071 MTFP1Q9UDX5 166 aa7.46□□□□□ -1.22
CAPN3-216ENST00000567071 RBMX2Q9Y388 322 aaKnown RBP7.46□□□□□ -1.22
CAPN3-216ENST00000567071 HSPG2P98160 4391 aa7.46□□□□□ -1.22
CAPN3-216ENST00000567071 IGKV1D-8A0A087WSZ0 117 aa7.45□□□□□ -1.22
CAPN3-216ENST00000567071 ODAMA1E959 279 aa7.45□□□□□ -1.22
CAPN3-216ENST00000567071 PRSS29PA6NIE9 313 aa7.45□□□□□ -1.22
CAPN3-216ENST00000567071 SHOXO15266 292 aa7.45□□□□□ -1.22
CAPN3-216ENST00000567071 ORC5O43913 435 aa7.45□□□□□ -1.22
CAPN3-216ENST00000567071 RBBP9O75884 186 aa7.45□□□□□ -1.22
CAPN3-216ENST00000567071 MT-ND4P03905 459 aa7.45□□□□□ -1.22
CAPN3-216ENST00000567071 CSN2P05814 226 aa7.45□□□□□ -1.22
CAPN3-216ENST00000567071 RCC1P18754 421 aaPredicted RBP7.45□□□□□ -1.22
CAPN3-216ENST00000567071 HLA-DMAP28067 261 aa7.45□□□□□ -1.22
CAPN3-216ENST00000567071 RCVRNP35243 200 aa7.45□□□□□ -1.22
CAPN3-216ENST00000567071 CBX5P45973 191 aa7.45□□□□□ -1.22
CAPN3-216ENST00000567071 P2RX3P56373 397 aa7.45□□□□□ -1.22
CAPN3-216ENST00000567071 ACTBP60709 375 aa7.45□□□□□ -1.22
CAPN3-216ENST00000567071 IFITM3Q01628 133 aa7.45□□□□□ -1.22
CAPN3-216ENST00000567071 HES1Q14469 280 aa7.45□□□□□ -1.22
CAPN3-216ENST00000567071 STEAP3Q658P3 488 aa7.45□□□□□ -1.22
CAPN3-216ENST00000567071 C5orf56Q8N8D9 126 aa7.45□□□□□ -1.22
CAPN3-216ENST00000567071 BEST4Q8NFU0 473 aa7.45□□□□□ -1.22
CAPN3-216ENST00000567071 MRGPRDQ8TDS7 321 aa7.45□□□□□ -1.22
CAPN3-216ENST00000567071 ARPC1AQ92747 370 aa7.45□□□□□ -1.22
CAPN3-216ENST00000567071 SNAPC3Q92966 411 aa7.45□□□□□ -1.22
CAPN3-216ENST00000567071 ZNF714Q96N38 554 aa7.45□□□□□ -1.22
CAPN3-216ENST00000567071 ELOVL1Q9BW60 279 aa7.45□□□□□ -1.22
CAPN3-216ENST00000567071 TMEM133Q9H2Q1 129 aa7.45□□□□□ -1.22
CAPN3-216ENST00000567071 TRAPPC2LQ9UL33 140 aa7.45□□□□□ -1.22
CAPN3-216ENST00000567071 SESN1Q9Y6P5 492 aa7.45□□□□□ -1.22
CAPN3-216ENST00000567071 ANKRD20A5PA0PJZ0 165 aa7.44□□□□□ -1.22
CAPN3-216ENST00000567071 M0QYG6 137 aa7.44□□□□□ -1.22
CAPN3-216ENST00000567071 TMEM11P17152 192 aa7.44□□□□□ -1.22
CAPN3-216ENST00000567071 VDAC1P21796 283 aa7.44□□□□□ -1.22
CAPN3-216ENST00000567071 DTYMKP23919 212 aa7.44□□□□□ -1.22
CAPN3-216ENST00000567071 HLA-DRB3P79483 266 aa7.44□□□□□ -1.22
CAPN3-216ENST00000567071 RUNX1Q01196 453 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms