RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 LINC01006Q8NI28 216 aa10.83□□□□□ -0.68
CLK3-218ENST00000566926 MARCH1Q8TCQ1 289 aa10.83□□□□□ -0.68
CLK3-218ENST00000566926 C5orf66Q9H5L9 145 aa10.83□□□□□ -0.68
CLK3-218ENST00000566926 RANBP3Q9H6Z4 567 aaPredicted RBP10.83□□□□□ -0.68
CLK3-218ENST00000566926 OR2S2Q9NQN1 319 aa10.83□□□□□ -0.68
CLK3-218ENST00000566926 FLVCR2Q9UPI3 526 aa10.83□□□□□ -0.68
CLK3-218ENST00000566926 AMMECR1Q9Y4X0 333 aaPredicted RBP10.83□□□□□ -0.68
CLK3-218ENST00000566926 HILPDAQ9Y5L2 63 aa10.83□□□□□ -0.68
CLK3-218ENST00000566926 hCG_2014768A0A024R1R8 64 aa10.82□□□□□ -0.68
CLK3-218ENST00000566926 OOSP1A8MZH6 123 aa10.82□□□□□ -0.68
CLK3-218ENST00000566926 YPEL1O60688 119 aa10.82□□□□□ -0.68
CLK3-218ENST00000566926 PFDN1O60925 122 aa10.82□□□□□ -0.68
CLK3-218ENST00000566926 B3GALNT1O75752 331 aa10.82□□□□□ -0.68
CLK3-218ENST00000566926 IGLV1-47P01700 117 aa10.82□□□□□ -0.68
CLK3-218ENST00000566926 OR4E1P0C645 316 aa10.82□□□□□ -0.68
CLK3-218ENST00000566926 ANXA7P20073 488 aaKnown RBP10.82□□□□□ -0.68
CLK3-218ENST00000566926 NFYAP23511 347 aaPredicted RBP10.82□□□□□ -0.68
CLK3-218ENST00000566926 BRS3P32247 399 aa10.82□□□□□ -0.68
CLK3-218ENST00000566926 SSTR5P35346 364 aa10.82□□□□□ -0.68
CLK3-218ENST00000566926 CEACAM6P40199 344 aa10.82□□□□□ -0.68
CLK3-218ENST00000566926 LUMP51884 338 aaPredicted RBP10.82□□□□□ -0.68
CLK3-218ENST00000566926 HLA-DRB5Q30154 266 aa10.82□□□□□ -0.68
CLK3-218ENST00000566926 CCDC144NLQ6NUI1 221 aa10.82□□□□□ -0.68
CLK3-218ENST00000566926 CADM3Q8N126 398 aa10.82□□□□□ -0.68
CLK3-218ENST00000566926 DYNAPQ8N1N2 210 aa10.82□□□□□ -0.68
CLK3-218ENST00000566926 ZBTB34Q8NCN2 500 aa10.82□□□□□ -0.68
CLK3-218ENST00000566926 OR10V1Q8NGI7 309 aa10.82□□□□□ -0.68
CLK3-218ENST00000566926 OR4P4Q8NGL7 312 aa10.82□□□□□ -0.68
CLK3-218ENST00000566926 OR4C13Q8NGP0 309 aa10.82□□□□□ -0.68
CLK3-218ENST00000566926 TAF15Q92804 592 aaKnown RBP eCLIP10.82□□□□□ -0.68
CLK3-218ENST00000566926 PPP1R14BQ96C90 147 aa10.82□□□□□ -0.68
CLK3-218ENST00000566926 AKR1E2Q96JD6 320 aa10.82□□□□□ -0.68
CLK3-218ENST00000566926 YPEL2Q96QA6 119 aa10.82□□□□□ -0.68
CLK3-218ENST00000566926 RSRP1Q9BUV0 290 aa10.82□□□□□ -0.68
CLK3-218ENST00000566926 NPFFR1Q9GZQ6 430 aa10.82□□□□□ -0.68
CLK3-218ENST00000566926 FXYD6Q9H0Q3 95 aa10.82□□□□□ -0.68
CLK3-218ENST00000566926 OR51J1Q9H342 316 aa10.82□□□□□ -0.68
CLK3-218ENST00000566926 GHITMQ9H3K2 345 aa10.82□□□□□ -0.68
CLK3-218ENST00000566926 RDH8Q9NYR8 311 aa10.82□□□□□ -0.68
CLK3-218ENST00000566926 GNG12Q9UBI6 72 aa10.82□□□□□ -0.68
CLK3-218ENST00000566926 TCF19Q9Y242 345 aa10.82□□□□□ -0.68
CLK3-218ENST00000566926 A0A0B4J293 547 aa10.81□□□□□ -0.68
CLK3-218ENST00000566926 HMX3A6NHT5 357 aa10.81□□□□□ -0.68
CLK3-218ENST00000566926 BUB1B-PAK6H3BSN5 160 aa10.81□□□□□ -0.68
CLK3-218ENST00000566926 ANXA3P12429 323 aa10.81□□□□□ -0.68
CLK3-218ENST00000566926 PAX6P26367 422 aa10.81□□□□□ -0.68
CLK3-218ENST00000566926 RAB7AP51149 207 aa10.81□□□□□ -0.68
CLK3-218ENST00000566926 FXYD4P59646 89 aa10.81□□□□□ -0.68
CLK3-218ENST00000566926 RND3P61587 244 aa10.81□□□□□ -0.68
CLK3-218ENST00000566926 DHODHQ02127 395 aa10.81□□□□□ -0.68
CLK3-218ENST00000566926 SGPP2Q8IWX5 399 aa10.81□□□□□ -0.68
CLK3-218ENST00000566926 OR1L1Q8NH94 360 aa10.81□□□□□ -0.68
CLK3-218ENST00000566926 RFESDQ8TAC1 157 aa10.81□□□□□ -0.68
CLK3-218ENST00000566926 PIFOQ8TCI5 191 aa10.81□□□□□ -0.68
CLK3-218ENST00000566926 ZNF431Q8TF32 576 aaPredicted RBP10.81□□□□□ -0.68
CLK3-218ENST00000566926 ASB13Q8WXK3 278 aa10.81□□□□□ -0.68
CLK3-218ENST00000566926 TOMM40LQ969M1 308 aa10.81□□□□□ -0.68
CLK3-218ENST00000566926 MED28Q9H204 178 aa10.81□□□□□ -0.68
CLK3-218ENST00000566926 KCNIP3Q9Y2W7 256 aa10.81□□□□□ -0.68
CLK3-218ENST00000566926 TRAV39A0A0B4J263 110 aa10.8□□□□□ -0.68
CLK3-218ENST00000566926 J3QR06 171 aa10.8□□□□□ -0.68
CLK3-218ENST00000566926 GPR31O00270 319 aa10.8□□□□□ -0.68
CLK3-218ENST00000566926 SSNA1O43805 119 aa10.8□□□□□ -0.68
CLK3-218ENST00000566926 DUS4LO95620 317 aaKnown RBP10.8□□□□□ -0.68
CLK3-218ENST00000566926 HLA-AP01891 365 aaKnown RBP10.8□□□□□ -0.68
CLK3-218ENST00000566926 RRAS2P62070 204 aaPredicted RBP10.8□□□□□ -0.68
CLK3-218ENST00000566926 CBX3Q13185 183 aa10.8□□□□□ -0.68
CLK3-218ENST00000566926 DHRS2Q13268 280 aa10.8□□□□□ -0.68
CLK3-218ENST00000566926 LDLRAD2Q5SZI1 272 aa10.8□□□□□ -0.68
CLK3-218ENST00000566926 KCTD9Q7L273 389 aa10.8□□□□□ -0.68
CLK3-218ENST00000566926 LYG2Q86SG7 212 aa10.8□□□□□ -0.68
CLK3-218ENST00000566926 BVESQ8NE79 360 aa10.8□□□□□ -0.68
CLK3-218ENST00000566926 OR2AK2Q8NG84 335 aa10.8□□□□□ -0.68
CLK3-218ENST00000566926 OR2T6Q8NHC8 308 aa10.8□□□□□ -0.68
CLK3-218ENST00000566926 WFDC12Q8WWY7 111 aa10.8□□□□□ -0.68
CLK3-218ENST00000566926 PHB2Q99623 299 aa10.8□□□□□ -0.68
CLK3-218ENST00000566926 RTBDNQ9BSG5 229 aaPredicted RBP10.8□□□□□ -0.68
CLK3-218ENST00000566926 SLC5A7Q9GZV3 580 aa10.8□□□□□ -0.68
CLK3-218ENST00000566926 SLC2A9Q9NRM0 540 aa10.8□□□□□ -0.68
CLK3-218ENST00000566926 GFOD1Q9NXC2 390 aa10.8□□□□□ -0.68
CLK3-218ENST00000566926 OR1A1Q9P1Q5 309 aa10.8□□□□□ -0.68
CLK3-218ENST00000566926 RBM7Q9Y580 266 aaKnown RBP10.8□□□□□ -0.68
CLK3-218ENST00000566926 A0A0B4J2A0 478 aa10.79□□□□□ -0.68
CLK3-218ENST00000566926 A6NDX4 124 aa10.79□□□□□ -0.68
CLK3-218ENST00000566926 AKR1C4P17516 323 aa10.79□□□□□ -0.68
CLK3-218ENST00000566926 RAB13P51153 203 aa10.79□□□□□ -0.68
CLK3-218ENST00000566926 PIGPP57054 158 aa10.79□□□□□ -0.68
CLK3-218ENST00000566926 LOXL3P58215 753 aa10.79□□□□□ -0.68
CLK3-218ENST00000566926 PROK1P58294 105 aa10.79□□□□□ -0.68
CLK3-218ENST00000566926 SRPXP78539 464 aa10.79□□□□□ -0.68
CLK3-218ENST00000566926 LTC4SQ16873 150 aa10.79□□□□□ -0.68
CLK3-218ENST00000566926 TPTE2P1Q5T6R2 138 aa10.79□□□□□ -0.68
CLK3-218ENST00000566926 C16orf82Q7Z2V1 217 aa10.79□□□□□ -0.68
CLK3-218ENST00000566926 AKAP14Q86UN6 197 aa10.79□□□□□ -0.68
CLK3-218ENST00000566926 C8orf31Q8N9H6 132 aa10.79□□□□□ -0.68
CLK3-218ENST00000566926 COQ8AQ8NI60 647 aa10.79□□□□□ -0.68
CLK3-218ENST00000566926 MITD1Q8WV92 249 aa10.79□□□□□ -0.68
CLK3-218ENST00000566926 SECTM1Q8WVN6 248 aa10.79□□□□□ -0.68
CLK3-218ENST00000566926 CAPSLQ8WWF8 208 aa10.79□□□□□ -0.68
CLK3-218ENST00000566926 RTN4IP1Q8WWV3 396 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms