RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 OR5T1Q8NG75 326 aa13.19□□□□□ -0.3
COMMD4-215ENST00000566843 KCNIP2Q9NS61 270 aa13.19□□□□□ -0.3
COMMD4-215ENST00000566843 TMEM106BQ9NUM4 274 aa13.19□□□□□ -0.3
COMMD4-215ENST00000566843 MRPS18CQ9Y3D5 142 aaKnown RBP13.19□□□□□ -0.3
COMMD4-215ENST00000566843 IGKV3D-15A0A087WSY6 115 aa13.18□□□□□ -0.3
COMMD4-215ENST00000566843 SOX15O60248 233 aa13.18□□□□□ -0.3
COMMD4-215ENST00000566843 NGFP01138 241 aa13.18□□□□□ -0.3
COMMD4-215ENST00000566843 IGHV3-9P01782 118 aa13.18□□□□□ -0.3
COMMD4-215ENST00000566843 P04436 131 aa13.18□□□□□ -0.3
COMMD4-215ENST00000566843 RFPL3SP0C7P2 107 aa13.18□□□□□ -0.3
COMMD4-215ENST00000566843 RPL29P47914 159 aaKnown RBP13.18□□□□□ -0.3
COMMD4-215ENST00000566843 CDC34P49427 236 aaPredicted RBP13.18□□□□□ -0.3
COMMD4-215ENST00000566843 BPIFB3P59826 476 aa13.18□□□□□ -0.3
COMMD4-215ENST00000566843 TRIP6Q15654 476 aaKnown RBP13.18□□□□□ -0.3
COMMD4-215ENST00000566843 ZNF709Q8N972 641 aa13.18□□□□□ -0.3
COMMD4-215ENST00000566843 ZBTB34Q8NCN2 500 aa13.18□□□□□ -0.3
COMMD4-215ENST00000566843 OR1L1Q8NH94 360 aa13.18□□□□□ -0.3
COMMD4-215ENST00000566843 MIEN1Q9BRT3 115 aa13.18□□□□□ -0.3
COMMD4-215ENST00000566843 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.18□□□□□ -0.3
COMMD4-215ENST00000566843 MBNL3Q9NUK0 354 aaKnown RBP13.18□□□□□ -0.3
COMMD4-215ENST00000566843 CLN8Q9UBY8 286 aa13.18□□□□□ -0.3
COMMD4-215ENST00000566843 GOLT1BQ9Y3E0 138 aa13.18□□□□□ -0.3
COMMD4-215ENST00000566843 WIPI2Q9Y4P8 454 aa13.18□□□□□ -0.3
COMMD4-215ENST00000566843 SDK2Q58EX2 2172 aa13.18□□□□□ -0.3
COMMD4-215ENST00000566843 C17orf112F2Z3M2 114 aa13.18□□□□□ -0.3
COMMD4-215ENST00000566843 ADMP35318 185 aa13.18□□□□□ -0.3
COMMD4-215ENST00000566843 WNT5AP41221 380 aa13.18□□□□□ -0.3
COMMD4-215ENST00000566843 EIF4EBP1Q13541 118 aaPredicted RBP13.18□□□□□ -0.3
COMMD4-215ENST00000566843 WIPI1Q5MNZ9 446 aaPredicted RBP13.18□□□□□ -0.3
COMMD4-215ENST00000566843 CYB5R2Q6BCY4 276 aa13.18□□□□□ -0.3
COMMD4-215ENST00000566843 ZNF705AQ6ZN79 300 aaPredicted RBP13.18□□□□□ -0.3
COMMD4-215ENST00000566843 Q8N7P7 452 aa13.18□□□□□ -0.3
COMMD4-215ENST00000566843 CMTM2Q8TAZ6 248 aa13.18□□□□□ -0.3
COMMD4-215ENST00000566843 RAB1CQ92928 201 aa13.18□□□□□ -0.3
COMMD4-215ENST00000566843 RYDENQ9NUL5 291 aaKnown RBP13.18□□□□□ -0.3
COMMD4-215ENST00000566843 TP53TG3Q9ULZ0 132 aa13.18□□□□□ -0.3
COMMD4-215ENST00000566843 CNTRLQ7Z7A1 2325 aa13.18□□□□□ -0.3
COMMD4-215ENST00000566843 A0A1W2PR80 420 aa13.17□□□□□ -0.3
COMMD4-215ENST00000566843 ODAMA1E959 279 aa13.17□□□□□ -0.3
COMMD4-215ENST00000566843 ANKRD30BLA7E2S9 258 aa13.17□□□□□ -0.3
COMMD4-215ENST00000566843 C3orf80F5H4A9 247 aa13.17□□□□□ -0.3
COMMD4-215ENST00000566843 MRPL33O75394 65 aaKnown RBP13.17□□□□□ -0.3
COMMD4-215ENST00000566843 C1QTNF9P0C862 333 aa13.17□□□□□ -0.3
COMMD4-215ENST00000566843 HLA-BQ31612 363 aa13.17□□□□□ -0.3
COMMD4-215ENST00000566843 SFRP2Q96HF1 295 aa13.17□□□□□ -0.3
COMMD4-215ENST00000566843 POM121L2Q96KW2 1035 aa13.17□□□□□ -0.3
COMMD4-215ENST00000566843 DUSP23Q9BVJ7 150 aa13.17□□□□□ -0.3
COMMD4-215ENST00000566843 ARHGAP21Q5T5U3 1957 aa13.17□□□□□ -0.3
COMMD4-215ENST00000566843 A0A096LPE4 126 aa13.16□□□□□ -0.3
COMMD4-215ENST00000566843 A0A1W2PPZ6 126 aa13.16□□□□□ -0.3
COMMD4-215ENST00000566843 ZNF503-AS2A6NEH8 195 aa13.16□□□□□ -0.3
COMMD4-215ENST00000566843 J3QT63 122 aa13.16□□□□□ -0.3
COMMD4-215ENST00000566843 LINC00614P0C842 121 aa13.16□□□□□ -0.3
COMMD4-215ENST00000566843 IL11RAQ14626 422 aa13.16□□□□□ -0.3
COMMD4-215ENST00000566843 TPTE2P1Q5T6R2 138 aa13.16□□□□□ -0.3
COMMD4-215ENST00000566843 Q6ZWC4 215 aa13.16□□□□□ -0.3
COMMD4-215ENST00000566843 ZNF114Q8NC26 417 aa13.16□□□□□ -0.3
COMMD4-215ENST00000566843 SDSLQ96GA7 329 aa13.16□□□□□ -0.3
COMMD4-215ENST00000566843 CIB3Q96Q77 187 aaPredicted RBP13.16□□□□□ -0.3
COMMD4-215ENST00000566843 TRAPPC2LQ9UL33 140 aa13.16□□□□□ -0.3
COMMD4-215ENST00000566843 RHBDL1O75783 438 aa13.16□□□□□ -0.3
COMMD4-215ENST00000566843 NDUFB4O95168 129 aa13.16□□□□□ -0.3
COMMD4-215ENST00000566843 CRYAAP02489 173 aa13.16□□□□□ -0.3
COMMD4-215ENST00000566843 IRF2P14316 349 aa13.16□□□□□ -0.3
COMMD4-215ENST00000566843 EPHA8P29322 1005 aaPredicted RBP13.16□□□□□ -0.3
COMMD4-215ENST00000566843 ATP5G3P48201 142 aa13.16□□□□□ -0.3
COMMD4-215ENST00000566843 LINC00310P59036 64 aa13.16□□□□□ -0.3
COMMD4-215ENST00000566843 TPPP2P59282 170 aa13.16□□□□□ -0.3
COMMD4-215ENST00000566843 LPAL2Q16609 132 aa13.16□□□□□ -0.3
COMMD4-215ENST00000566843 CST9LP1Q5W188 147 aa13.16□□□□□ -0.3
COMMD4-215ENST00000566843 MYPOPQ86VE0 399 aaPredicted RBP13.16□□□□□ -0.3
COMMD4-215ENST00000566843 ZNF645Q8N7E2 425 aa13.16□□□□□ -0.3
COMMD4-215ENST00000566843 SGMS2Q8NHU3 365 aa13.16□□□□□ -0.3
COMMD4-215ENST00000566843 DTD1Q8TEA8 209 aa13.16□□□□□ -0.3
COMMD4-215ENST00000566843 TXNDC17Q9BRA2 123 aa13.16□□□□□ -0.3
COMMD4-215ENST00000566843 IL17BQ9UHF5 180 aa13.16□□□□□ -0.3
COMMD4-215ENST00000566843 FRYLO94915 3013 aa13.16□□□□□ -0.3
COMMD4-215ENST00000566843 TRAV9-1A0A075B6T8 112 aa13.15□□□□□ -0.3
COMMD4-215ENST00000566843 RBFOX2O43251 390 aaKnown RBP eCLIP13.15□□□□□ -0.3
COMMD4-215ENST00000566843 GDF9O60383 454 aa13.15□□□□□ -0.3
COMMD4-215ENST00000566843 ZG16O60844 167 aa13.15□□□□□ -0.3
COMMD4-215ENST00000566843 RAMP3O60896 148 aa13.15□□□□□ -0.3
COMMD4-215ENST00000566843 WISP2O76076 250 aa13.15□□□□□ -0.3
COMMD4-215ENST00000566843 EGR1P18146 543 aa13.15□□□□□ -0.3
COMMD4-215ENST00000566843 G6PCP35575 357 aa13.15□□□□□ -0.3
COMMD4-215ENST00000566843 GFRA1P56159 465 aa13.15□□□□□ -0.3
COMMD4-215ENST00000566843 RANP62826 216 aaKnown RBP13.15□□□□□ -0.3
COMMD4-215ENST00000566843 PRR18Q8N4B5 295 aa13.15□□□□□ -0.3
COMMD4-215ENST00000566843 OR51B6Q9H340 312 aa13.15□□□□□ -0.3
COMMD4-215ENST00000566843 PARD6AQ9NPB6 346 aa13.15□□□□□ -0.3
COMMD4-215ENST00000566843 PILRBQ9UKJ0 227 aa13.15□□□□□ -0.3
COMMD4-215ENST00000566843 RAB29O14966 203 aa13.15□□□□□ -0.3
COMMD4-215ENST00000566843 CD82P27701 267 aa13.15□□□□□ -0.3
COMMD4-215ENST00000566843 LHX2P50458 406 aa13.15□□□□□ -0.3
COMMD4-215ENST00000566843 RPL30P62888 115 aaKnown RBP13.15□□□□□ -0.3
COMMD4-215ENST00000566843 TCF23Q7RTU1 214 aa13.15□□□□□ -0.3
COMMD4-215ENST00000566843 OR2Y1Q8NGV0 311 aa13.15□□□□□ -0.3
COMMD4-215ENST00000566843 C5orf30Q96GV9 206 aa13.15□□□□□ -0.3
COMMD4-215ENST00000566843 DERL1Q9BUN8 251 aa13.15□□□□□ -0.3
COMMD4-215ENST00000566843 MDFIC2A0A1B0GVS7 189 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms