RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 CEBPZOSA8MTT3 80 aa14.03□□□□□ -0.16
CMTM3-213ENST00000566756 PSPNO60542 156 aa14.03□□□□□ -0.16
CMTM3-213ENST00000566756 ZNF737O75373 536 aa14.03□□□□□ -0.16
CMTM3-213ENST00000566756 YIF1AO95070 293 aa14.03□□□□□ -0.16
CMTM3-213ENST00000566756 KIR2DL2P43627 348 aaPredicted RBP14.03□□□□□ -0.16
CMTM3-213ENST00000566756 OR3A1P47881 315 aa14.03□□□□□ -0.16
CMTM3-213ENST00000566756 CD81P60033 236 aa14.03□□□□□ -0.16
CMTM3-213ENST00000566756 RPP25LQ8N5L8 163 aaKnown RBP14.03□□□□□ -0.16
CMTM3-213ENST00000566756 C9orf106Q8NAJ2 232 aa14.03□□□□□ -0.16
CMTM3-213ENST00000566756 C1orf162Q8NEQ5 155 aaPredicted RBP14.03□□□□□ -0.16
CMTM3-213ENST00000566756 OR1L1Q8NH94 360 aa14.03□□□□□ -0.16
CMTM3-213ENST00000566756 KLF14Q8TD94 323 aaPredicted RBP14.03□□□□□ -0.16
CMTM3-213ENST00000566756 LURAP1Q96LR2 239 aa14.03□□□□□ -0.16
CMTM3-213ENST00000566756 CXXC4Q9H2H0 198 aa14.03□□□□□ -0.16
CMTM3-213ENST00000566756 DCHS1Q96JQ0 3298 aa14.03□□□□□ -0.16
CMTM3-213ENST00000566756 ANKRD11Q6UB99 2663 aaPredicted RBP14.03□□□□□ -0.16
CMTM3-213ENST00000566756 MBD3L4A6NDZ8 208 aaPredicted RBP14.02□□□□□ -0.16
CMTM3-213ENST00000566756 MBD3L3A6NE82 208 aaPredicted RBP14.02□□□□□ -0.16
CMTM3-213ENST00000566756 MBD3L5A6NJ08 208 aaPredicted RBP14.02□□□□□ -0.16
CMTM3-213ENST00000566756 SOX15O60248 233 aa14.02□□□□□ -0.16
CMTM3-213ENST00000566756 GRPP07492 148 aa14.02□□□□□ -0.16
CMTM3-213ENST00000566756 FGF8P55075 233 aaPredicted RBP14.02□□□□□ -0.16
CMTM3-213ENST00000566756 NKX6-1P78426 367 aaPredicted RBP14.02□□□□□ -0.16
CMTM3-213ENST00000566756 MEF2BQ02080 365 aaPredicted RBP14.02□□□□□ -0.16
CMTM3-213ENST00000566756 TBR1Q16650 682 aa14.02□□□□□ -0.16
CMTM3-213ENST00000566756 ALKBH6Q3KRA9 238 aa14.02□□□□□ -0.16
CMTM3-213ENST00000566756 TRAT1Q6PIZ9 186 aa14.02□□□□□ -0.16
CMTM3-213ENST00000566756 C11orf53Q8IXP5 236 aa14.02□□□□□ -0.16
CMTM3-213ENST00000566756 C1orf174Q8IYL3 243 aa14.02□□□□□ -0.16
CMTM3-213ENST00000566756 GCNT2Q8N0V5 402 aa14.02□□□□□ -0.16
CMTM3-213ENST00000566756 MBD3L2Q8NHZ7 208 aaPredicted RBP14.02□□□□□ -0.16
CMTM3-213ENST00000566756 NINJ1Q92982 152 aa14.02□□□□□ -0.16
CMTM3-213ENST00000566756 MANBALQ9NQG1 85 aa14.02□□□□□ -0.16
CMTM3-213ENST00000566756 INTS1Q8N201 2190 aaKnown RBP14.02□□□□□ -0.16
CMTM3-213ENST00000566756 CFAP47Q6ZTR5 3102 aa14.02□□□□□ -0.17
CMTM3-213ENST00000566756 ODAMA1E959 279 aa14.02□□□□□ -0.17
CMTM3-213ENST00000566756 DLL1O00548 723 aa14.02□□□□□ -0.17
CMTM3-213ENST00000566756 IGKV3-15P01624 115 aa14.02□□□□□ -0.17
CMTM3-213ENST00000566756 HBZP02008 142 aa14.02□□□□□ -0.17
CMTM3-213ENST00000566756 TRGC2P03986 189 aa14.02□□□□□ -0.17
CMTM3-213ENST00000566756 ERVS71-1P61550 626 aa14.02□□□□□ -0.17
CMTM3-213ENST00000566756 MZT1Q08AG7 82 aa14.02□□□□□ -0.17
CMTM3-213ENST00000566756 PLSCR4Q9NRQ2 329 aa14.02□□□□□ -0.17
CMTM3-213ENST00000566756 CEP295Q9C0D2 2601 aa14.01□□□□□ -0.17
CMTM3-213ENST00000566756 PPP1R2P9O14990 202 aa14.01□□□□□ -0.17
CMTM3-213ENST00000566756 RAMP3O60896 148 aa14.01□□□□□ -0.17
CMTM3-213ENST00000566756 KBTBD11O94819 623 aa14.01□□□□□ -0.17
CMTM3-213ENST00000566756 KITLGP21583 273 aa14.01□□□□□ -0.17
CMTM3-213ENST00000566756 PSMB3P49720 205 aa14.01□□□□□ -0.17
CMTM3-213ENST00000566756 RPL30P62888 115 aaKnown RBP14.01□□□□□ -0.17
CMTM3-213ENST00000566756 OR8G2PQ6IF36 304 aa14.01□□□□□ -0.17
CMTM3-213ENST00000566756 ACP7Q6ZNF0 438 aa14.01□□□□□ -0.17
CMTM3-213ENST00000566756 OR10P1Q8NGE3 313 aa14.01□□□□□ -0.17
CMTM3-213ENST00000566756 UBALD1Q8TB05 177 aa14.01□□□□□ -0.17
CMTM3-213ENST00000566756 C5orf30Q96GV9 206 aa14.01□□□□□ -0.17
CMTM3-213ENST00000566756 HSD17B10Q99714 261 aaKnown RBP14.01□□□□□ -0.17
CMTM3-213ENST00000566756 OBP2BQ9NPH6 170 aa14.01□□□□□ -0.17
CMTM3-213ENST00000566756 TP53TG5Q9Y2B4 290 aa14.01□□□□□ -0.17
CMTM3-213ENST00000566756 PRRC2CQ9Y520 2896 aaKnown RBP14□□□□□ -0.17
CMTM3-213ENST00000566756 PHOX2AO14813 284 aa14□□□□□ -0.17
CMTM3-213ENST00000566756 MLNRO43193 412 aa14□□□□□ -0.17
CMTM3-213ENST00000566756 PTBP3O95758 552 aaKnown RBP14□□□□□ -0.17
CMTM3-213ENST00000566756 IGKV1D-33P01593 117 aa14□□□□□ -0.17
CMTM3-213ENST00000566756 IGKV1-33P01594 117 aa14□□□□□ -0.17
CMTM3-213ENST00000566756 COX5AP20674 150 aa14□□□□□ -0.17
CMTM3-213ENST00000566756 HOXC12P31275 282 aa14□□□□□ -0.17
CMTM3-213ENST00000566756 G6PCP35575 357 aa14□□□□□ -0.17
CMTM3-213ENST00000566756 UCNP55089 124 aa14□□□□□ -0.17
CMTM3-213ENST00000566756 ELLP55199 621 aaPredicted RBP14□□□□□ -0.17
CMTM3-213ENST00000566756 GNB2P62879 340 aa14□□□□□ -0.17
CMTM3-213ENST00000566756 TMEM241Q24JQ0 296 aa14□□□□□ -0.17
CMTM3-213ENST00000566756 COQ2Q96H96 371 aa14□□□□□ -0.17
CMTM3-213ENST00000566756 PYGO2Q9BRQ0 406 aa14□□□□□ -0.17
CMTM3-213ENST00000566756 A0A1B0GWJ7 208 aa14□□□□□ -0.17
CMTM3-213ENST00000566756 FAM90A9PA6NNJ1 464 aa14□□□□□ -0.17
CMTM3-213ENST00000566756 KRASP01116 189 aa14□□□□□ -0.17
CMTM3-213ENST00000566756 MDKP21741 143 aaPredicted RBP14□□□□□ -0.17
CMTM3-213ENST00000566756 MPV17P39210 176 aa14□□□□□ -0.17
CMTM3-213ENST00000566756 AARDQ4LEZ3 155 aa14□□□□□ -0.17
CMTM3-213ENST00000566756 NCR3LG1Q68D85 454 aa14□□□□□ -0.17
CMTM3-213ENST00000566756 ACSM6Q6P461 480 aa14□□□□□ -0.17
CMTM3-213ENST00000566756 FAM180AQ6UWF9 173 aa14□□□□□ -0.17
CMTM3-213ENST00000566756 HIST3H2BBQ8N257 126 aa14□□□□□ -0.17
CMTM3-213ENST00000566756 DTD1Q8TEA8 209 aa14□□□□□ -0.17
CMTM3-213ENST00000566756 SMIM7Q9BQ49 75 aa14□□□□□ -0.17
CMTM3-213ENST00000566756 ACTR3CQ9C0K3 210 aaPredicted RBP14□□□□□ -0.17
CMTM3-213ENST00000566756 PTPRQQ9UMZ3 2332 aa13.99□□□□□ -0.17
CMTM3-213ENST00000566756 S1PR2O95136 353 aa13.99□□□□□ -0.17
CMTM3-213ENST00000566756 TMPRSS3P57727 454 aa13.99□□□□□ -0.17
CMTM3-213ENST00000566756 BRWD1-AS2P59051 145 aa13.99□□□□□ -0.17
CMTM3-213ENST00000566756 HTD2P86397 168 aa13.99□□□□□ -0.17
CMTM3-213ENST00000566756 TMEM249Q2WGJ8 235 aa13.99□□□□□ -0.17
CMTM3-213ENST00000566756 PYY3Q5JQD4 70 aa13.99□□□□□ -0.17
CMTM3-213ENST00000566756 SPNS3Q6ZMD2 512 aa13.99□□□□□ -0.17
CMTM3-213ENST00000566756 TGIF2LYQ8IUE0 185 aa13.99□□□□□ -0.17
CMTM3-213ENST00000566756 CNEP1R1Q8N9A8 125 aa13.99□□□□□ -0.17
CMTM3-213ENST00000566756 OR52L2PQ8NGH6 319 aa13.99□□□□□ -0.17
CMTM3-213ENST00000566756 ABHD5Q8WTS1 349 aa13.99□□□□□ -0.17
CMTM3-213ENST00000566756 EDARADDQ8WWZ3 215 aa13.99□□□□□ -0.17
CMTM3-213ENST00000566756 TINAGQ9UJW2 476 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms