RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 TMEM65Q6PI78 240 aa11.37□□□□□ -0.59
FANCA-220ENST00000566409 ZNF773Q6PK81 442 aa11.37□□□□□ -0.59
FANCA-220ENST00000566409 Q6ZS49 121 aa11.37□□□□□ -0.59
FANCA-220ENST00000566409 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.37□□□□□ -0.59
FANCA-220ENST00000566409 OR10J5Q8NHC4 309 aa11.37□□□□□ -0.59
FANCA-220ENST00000566409 FCGR1BQ92637 280 aa11.37□□□□□ -0.59
FANCA-220ENST00000566409 CLCC1Q96S66 551 aa11.37□□□□□ -0.59
FANCA-220ENST00000566409 FAM103A1Q9BTL3 118 aaKnown RBP11.37□□□□□ -0.59
FANCA-220ENST00000566409 Q9H521 79 aa11.37□□□□□ -0.59
FANCA-220ENST00000566409 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.37□□□□□ -0.59
FANCA-220ENST00000566409 METTL1Q9UBP6 276 aaKnown RBP11.37□□□□□ -0.59
FANCA-220ENST00000566409 SCOCQ9UIL1 159 aa11.37□□□□□ -0.59
FANCA-220ENST00000566409 VSIG4Q9Y279 399 aa11.37□□□□□ -0.59
FANCA-220ENST00000566409 A3GALT2U3KPV4 340 aa11.37□□□□□ -0.59
FANCA-220ENST00000566409 A0A1W2PN81 502 aa11.36□□□□□ -0.59
FANCA-220ENST00000566409 IGLV2-23P01705 113 aa11.36□□□□□ -0.59
FANCA-220ENST00000566409 CLEC2LP0C7M8 214 aa11.36□□□□□ -0.59
FANCA-220ENST00000566409 SDC2P34741 201 aa11.36□□□□□ -0.59
FANCA-220ENST00000566409 CHRNA7P36544 502 aa11.36□□□□□ -0.59
FANCA-220ENST00000566409 RPS16P62249 146 aaKnown RBP11.36□□□□□ -0.59
FANCA-220ENST00000566409 ARFRP1Q13795 201 aa11.36□□□□□ -0.59
FANCA-220ENST00000566409 PLGLAQ15195 96 aa11.36□□□□□ -0.59
FANCA-220ENST00000566409 SRSF7Q16629 238 aaKnown RBP eCLIP11.36□□□□□ -0.59
FANCA-220ENST00000566409 CDNFQ49AH0 187 aa11.36□□□□□ -0.59
FANCA-220ENST00000566409 DEFB121Q5J5C9 76 aa11.36□□□□□ -0.59
FANCA-220ENST00000566409 ZNF562Q6V9R5 426 aa11.36□□□□□ -0.59
FANCA-220ENST00000566409 PPP1R27Q86WC6 154 aa11.36□□□□□ -0.59
FANCA-220ENST00000566409 PDPNQ86YL7 162 aa11.36□□□□□ -0.59
FANCA-220ENST00000566409 OR5M8Q8NGP6 311 aa11.36□□□□□ -0.59
FANCA-220ENST00000566409 OR1N2Q8NGR9 330 aa11.36□□□□□ -0.59
FANCA-220ENST00000566409 DPF1Q92782 380 aa11.36□□□□□ -0.59
FANCA-220ENST00000566409 ALX4Q9H161 411 aaPredicted RBP11.36□□□□□ -0.59
FANCA-220ENST00000566409 OR2D2Q9H210 308 aa11.36□□□□□ -0.59
FANCA-220ENST00000566409 DAPK2Q9UIK4 370 aa11.36□□□□□ -0.59
FANCA-220ENST00000566409 SRRM4A7MD48 611 aaKnown RBP11.35□□□□□ -0.59
FANCA-220ENST00000566409 ARPC1BO15143 372 aaKnown RBP11.35□□□□□ -0.59
FANCA-220ENST00000566409 SLC25A17O43808 307 aa11.35□□□□□ -0.59
FANCA-220ENST00000566409 CA2P00918 260 aa11.35□□□□□ -0.59
FANCA-220ENST00000566409 CRYGBP07316 175 aa11.35□□□□□ -0.59
FANCA-220ENST00000566409 PJVKQ0ZLH3 352 aa11.35□□□□□ -0.59
FANCA-220ENST00000566409 MRGPRG-AS1Q2M3A8 158 aa11.35□□□□□ -0.59
FANCA-220ENST00000566409 AKIRIN2Q53H80 203 aa11.35□□□□□ -0.59
FANCA-220ENST00000566409 SFXN4Q6P4A7 337 aa11.35□□□□□ -0.59
FANCA-220ENST00000566409 TPRA1Q86W33 373 aa11.35□□□□□ -0.59
FANCA-220ENST00000566409 H1FOOQ8IZA3 346 aaPredicted RBP11.35□□□□□ -0.59
FANCA-220ENST00000566409 LFNGQ8NES3 379 aa11.35□□□□□ -0.59
FANCA-220ENST00000566409 FLYWCH2Q96CP2 140 aaKnown RBP11.35□□□□□ -0.59
FANCA-220ENST00000566409 TSNAXQ99598 290 aaKnown RBP11.35□□□□□ -0.59
FANCA-220ENST00000566409 SLC35D1Q9NTN3 355 aa11.35□□□□□ -0.59
FANCA-220ENST00000566409 SSR3Q9UNL2 185 aa11.35□□□□□ -0.59
FANCA-220ENST00000566409 FOXA2Q9Y261 457 aaPredicted RBP11.35□□□□□ -0.59
FANCA-220ENST00000566409 RRP15Q9Y3B9 282 aaKnown RBP11.35□□□□□ -0.59
FANCA-220ENST00000566409 SEC14L6B5MCN3 397 aa11.34□□□□□ -0.59
FANCA-220ENST00000566409 SSX5O60225 188 aa11.34□□□□□ -0.59
FANCA-220ENST00000566409 SPDEFO95238 335 aa11.34□□□□□ -0.59
FANCA-220ENST00000566409 APOA2P02652 100 aa11.34□□□□□ -0.59
FANCA-220ENST00000566409 TALDO1P37837 337 aa11.34□□□□□ -0.59
FANCA-220ENST00000566409 DGCR2P98153 550 aa11.34□□□□□ -0.59
FANCA-220ENST00000566409 ZNF616Q08AN1 781 aa11.34□□□□□ -0.59
FANCA-220ENST00000566409 ZNF260Q3ZCT1 412 aa11.34□□□□□ -0.59
FANCA-220ENST00000566409 HACD4Q5VWC8 232 aa11.34□□□□□ -0.59
FANCA-220ENST00000566409 UNQ5815/PRO19632Q6UWF5 114 aa11.34□□□□□ -0.59
FANCA-220ENST00000566409 TCTEX1D1Q8N7M0 179 aa11.34□□□□□ -0.59
FANCA-220ENST00000566409 LGALS14Q8TCE9 139 aa11.34□□□□□ -0.59
FANCA-220ENST00000566409 NUDCD2Q8WVJ2 157 aa11.34□□□□□ -0.59
FANCA-220ENST00000566409 STAB2Q8WWQ8 2551 aa11.34□□□□□ -0.59
FANCA-220ENST00000566409 TMEM235A6NFC5 223 aa11.33□□□□□ -0.6
FANCA-220ENST00000566409 DTYMKP23919 212 aa11.33□□□□□ -0.6
FANCA-220ENST00000566409 MXD1Q05195 221 aa11.33□□□□□ -0.6
FANCA-220ENST00000566409 TMEM267Q0VDI3 215 aaPredicted RBP11.33□□□□□ -0.6
FANCA-220ENST00000566409 NEDD8Q15843 81 aa11.33□□□□□ -0.6
FANCA-220ENST00000566409 ACTBL2Q562R1 376 aa11.33□□□□□ -0.6
FANCA-220ENST00000566409 C9orf66Q5T8R8 295 aa11.33□□□□□ -0.6
FANCA-220ENST00000566409 BVESQ8NE79 360 aa11.33□□□□□ -0.6
FANCA-220ENST00000566409 OR5H6Q8NGV6 325 aa11.33□□□□□ -0.6
FANCA-220ENST00000566409 ABHD5Q8WTS1 349 aa11.33□□□□□ -0.6
FANCA-220ENST00000566409 DDB2Q92466 427 aa11.33□□□□□ -0.6
FANCA-220ENST00000566409 MS4A10Q96PG2 267 aa11.33□□□□□ -0.6
FANCA-220ENST00000566409 GINS4Q9BRT9 223 aa11.33□□□□□ -0.6
FANCA-220ENST00000566409 CENPOQ9BU64 300 aa11.33□□□□□ -0.6
FANCA-220ENST00000566409 ST6GALNAC5Q9BVH7 336 aa11.33□□□□□ -0.6
FANCA-220ENST00000566409 NBEAL2Q6ZNJ1 2754 aa11.33□□□□□ -0.6
FANCA-220ENST00000566409 LINC00473A8K010 186 aa11.32□□□□□ -0.6
FANCA-220ENST00000566409 OR8U8P0C7N1 319 aa11.32□□□□□ -0.6
FANCA-220ENST00000566409 DUTP33316 252 aaKnown RBP11.32□□□□□ -0.6
FANCA-220ENST00000566409 FXYD3Q14802 87 aa11.32□□□□□ -0.6
FANCA-220ENST00000566409 ARL6IP1Q15041 203 aa11.32□□□□□ -0.6
FANCA-220ENST00000566409 TMEM177Q53S58 311 aa11.32□□□□□ -0.6
FANCA-220ENST00000566409 C11orf87Q6NUJ2 197 aa11.32□□□□□ -0.6
FANCA-220ENST00000566409 GRPEL2Q8TAA5 225 aa11.32□□□□□ -0.6
FANCA-220ENST00000566409 DCUN1D4Q92564 292 aa11.32□□□□□ -0.6
FANCA-220ENST00000566409 ARPC1AQ92747 370 aa11.32□□□□□ -0.6
FANCA-220ENST00000566409 SLC25A38Q96DW6 304 aa11.32□□□□□ -0.6
FANCA-220ENST00000566409 IGHV4OR15-8A0A075B7B6 117 aa11.31□□□□□ -0.6
FANCA-220ENST00000566409 A0A087WW49 117 aa11.31□□□□□ -0.6
FANCA-220ENST00000566409 LOC100506127A0A0U1RQW1 187 aa11.31□□□□□ -0.6
FANCA-220ENST00000566409 J3QRK9 145 aa11.31□□□□□ -0.6
FANCA-220ENST00000566409 RAMP3O60896 148 aa11.31□□□□□ -0.6
FANCA-220ENST00000566409 IGLV2-14P01704 120 aa11.31□□□□□ -0.6
FANCA-220ENST00000566409 IGHV3-11P01762 117 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms