RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 TMEM186Q96B77 213 aa24.86■■□□□ 1.57
CTCF-203ENST00000566078 C1orf159Q96HA4 380 aa24.86■■□□□ 1.57
CTCF-203ENST00000566078 RAMP3O60896 148 aa24.86■■□□□ 1.57
CTCF-203ENST00000566078 ARG1P05089 322 aa24.86■■□□□ 1.57
CTCF-203ENST00000566078 THBS3P49746 956 aa24.86■■□□□ 1.57
CTCF-203ENST00000566078 ZNF137PP52743 207 aa24.86■■□□□ 1.57
CTCF-203ENST00000566078 ZNF585BQ52M93 769 aa24.86■■□□□ 1.57
CTCF-203ENST00000566078 FAM71F2Q6NXP2 309 aa24.86■■□□□ 1.57
CTCF-203ENST00000566078 LYZL2Q7Z4W2 148 aa24.86■■□□□ 1.57
CTCF-203ENST00000566078 TCTEX1D1Q8N7M0 179 aa24.86■■□□□ 1.57
CTCF-203ENST00000566078 MAPK1IP1LQ8NDC0 245 aa24.86■■□□□ 1.57
CTCF-203ENST00000566078 OR4P4Q8NGL7 312 aa24.86■■□□□ 1.57
CTCF-203ENST00000566078 RBPMSQ93062 196 aaKnown RBP24.86■■□□□ 1.57
CTCF-203ENST00000566078 TBX15Q96SF7 602 aa24.86■■□□□ 1.57
CTCF-203ENST00000566078 AMMECR1Q9Y4X0 333 aaPredicted RBP24.86■■□□□ 1.57
CTCF-203ENST00000566078 PDZD9Q8IXQ8 264 aa24.85■■□□□ 1.57
CTCF-203ENST00000566078 IL22RA2Q969J5 263 aa24.85■■□□□ 1.57
CTCF-203ENST00000566078 ST6GALNAC6Q969X2 333 aa24.85■■□□□ 1.57
CTCF-203ENST00000566078 ADTRPQ96IZ2 230 aa24.85■■□□□ 1.57
CTCF-203ENST00000566078 C13orf42A0A1B0GVH6 325 aa24.84■■□□□ 1.57
CTCF-203ENST00000566078 C5orf51A6NDU8 294 aa24.84■■□□□ 1.57
CTCF-203ENST00000566078 RNASEK-C17orf49H0YIS7 233 aa24.84■■□□□ 1.57
CTCF-203ENST00000566078 REG1BP48304 166 aa24.84■■□□□ 1.57
CTCF-203ENST00000566078 BRWD1-AS2P59051 145 aa24.84■■□□□ 1.57
CTCF-203ENST00000566078 ZNF816Q0VGE8 651 aaPredicted RBP24.84■■□□□ 1.57
CTCF-203ENST00000566078 DIAPH2-AS1Q14236 149 aa24.84■■□□□ 1.57
CTCF-203ENST00000566078 GGNBP1Q5YKI7 109 aa24.84■■□□□ 1.57
CTCF-203ENST00000566078 GSG1LQ6UXU4 331 aa24.84■■□□□ 1.57
CTCF-203ENST00000566078 DDB2Q92466 427 aa24.84■■□□□ 1.57
CTCF-203ENST00000566078 PDCD10Q9BUL8 212 aa24.84■■□□□ 1.57
CTCF-203ENST00000566078 MRPL20Q9BYC9 149 aaKnown RBP24.84■■□□□ 1.57
CTCF-203ENST00000566078 PRELID3BQ9Y3B1 194 aa24.84■■□□□ 1.57
CTCF-203ENST00000566078 BUB1B-PAK6H3BSN5 160 aa24.83■■□□□ 1.57
CTCF-203ENST00000566078 FCGR3BO75015 233 aa24.83■■□□□ 1.57
CTCF-203ENST00000566078 IFNA21P01568 189 aa24.83■■□□□ 1.57
CTCF-203ENST00000566078 GIPP09681 153 aaPredicted RBP24.83■■□□□ 1.57
CTCF-203ENST00000566078 LPAR6P43657 344 aa24.83■■□□□ 1.57
CTCF-203ENST00000566078 PAX8Q06710 450 aa24.83■■□□□ 1.57
CTCF-203ENST00000566078 ZNF383Q8NA42 475 aa24.83■■□□□ 1.57
CTCF-203ENST00000566078 WDR89Q96FK6 387 aaPredicted RBP24.83■■□□□ 1.57
CTCF-203ENST00000566078 FAM212BQ9NTI7 297 aaPredicted RBP24.83■■□□□ 1.57
CTCF-203ENST00000566078 MPTX1A8MV57 137 aa24.83■■□□□ 1.56
CTCF-203ENST00000566078 ODF3BA8MYP8 253 aa24.83■■□□□ 1.56
CTCF-203ENST00000566078 OR2A4O95047 310 aa24.83■■□□□ 1.56
CTCF-203ENST00000566078 IGKV1-39P01597 117 aa24.83■■□□□ 1.56
CTCF-203ENST00000566078 IGKV1D-39P04432 117 aa24.83■■□□□ 1.56
CTCF-203ENST00000566078 CT45A6P0DMU7 189 aa24.83■■□□□ 1.56
CTCF-203ENST00000566078 CT45A5P0DMU8 189 aa24.83■■□□□ 1.56
CTCF-203ENST00000566078 CT45A7P0DMV0 189 aa24.83■■□□□ 1.56
CTCF-203ENST00000566078 TCTE3Q8IZS6 198 aa24.83■■□□□ 1.56
CTCF-203ENST00000566078 LINC01356Q8N9X3 169 aa24.83■■□□□ 1.56
CTCF-203ENST00000566078 OR2A7Q96R45 310 aa24.83■■□□□ 1.56
CTCF-203ENST00000566078 DUXBA0A1W2PPF3 345 aa24.82■■□□□ 1.56
CTCF-203ENST00000566078 RPA2P15927 270 aa24.82■■□□□ 1.56
CTCF-203ENST00000566078 KIR2DS2P43631 304 aa24.82■■□□□ 1.56
CTCF-203ENST00000566078 TGIF2LXQ8IUE1 241 aa24.82■■□□□ 1.56
CTCF-203ENST00000566078 CD300LFQ8TDQ1 290 aa24.82■■□□□ 1.56
CTCF-203ENST00000566078 A0A1W2PRD5 423 aa24.81■■□□□ 1.56
CTCF-203ENST00000566078 A0A1W2PRF3 423 aa24.81■■□□□ 1.56
CTCF-203ENST00000566078 A0A1W2PRM7 423 aa24.81■■□□□ 1.56
CTCF-203ENST00000566078 S1PR2O95136 353 aa24.81■■□□□ 1.56
CTCF-203ENST00000566078 LHX4Q969G2 390 aa24.81■■□□□ 1.56
CTCF-203ENST00000566078 SEC22AQ96IW7 307 aa24.81■■□□□ 1.56
CTCF-203ENST00000566078 OR10C1Q96KK4 312 aa24.81■■□□□ 1.56
CTCF-203ENST00000566078 FOXC2Q99958 501 aa24.81■■□□□ 1.56
CTCF-203ENST00000566078 TMED3Q9Y3Q3 217 aa24.81■■□□□ 1.56
CTCF-203ENST00000566078 SMLR1H3BR10 107 aa24.8■■□□□ 1.56
CTCF-203ENST00000566078 BOLA2-SMG1P6H3BVE0 249 aa24.8■■□□□ 1.56
CTCF-203ENST00000566078 TRAV20A0A0B4J274 112 aa24.79■■□□□ 1.56
CTCF-203ENST00000566078 PIGBOS1A0A0B4J2F0 54 aa24.79■■□□□ 1.56
CTCF-203ENST00000566078 HNRNPCP07910 306 aaKnown RBP eCLIP24.79■■□□□ 1.56
CTCF-203ENST00000566078 RAP2BP61225 183 aa24.79■■□□□ 1.56
CTCF-203ENST00000566078 WFDC11Q8NEX6 87 aa24.79■■□□□ 1.56
CTCF-203ENST00000566078 ASB13Q8WXK3 278 aa24.79■■□□□ 1.56
CTCF-203ENST00000566078 PPP1R14BQ96C90 147 aa24.79■■□□□ 1.56
CTCF-203ENST00000566078 HIF1ANQ9NWT6 349 aa24.79■■□□□ 1.56
CTCF-203ENST00000566078 HTR1DP28221 377 aa24.79■■□□□ 1.56
CTCF-203ENST00000566078 RNASE11Q8TAA1 199 aaKnown RBP24.79■■□□□ 1.56
CTCF-203ENST00000566078 NABP2Q9BQ15 211 aa24.79■■□□□ 1.56
CTCF-203ENST00000566078 ITPR3Q14573 2671 aa24.78■■□□□ 1.56
CTCF-203ENST00000566078 RBFOX2O43251 390 aaKnown RBP eCLIP24.78■■□□□ 1.56
CTCF-203ENST00000566078 SRSF4Q08170 494 aaKnown RBP24.78■■□□□ 1.56
CTCF-203ENST00000566078 OR2T35Q8NGX2 323 aa24.78■■□□□ 1.56
CTCF-203ENST00000566078 OR4S2Q8NH73 311 aa24.78■■□□□ 1.56
CTCF-203ENST00000566078 RPEQ96AT9 228 aa24.78■■□□□ 1.56
CTCF-203ENST00000566078 LY6LH3BQJ8 138 aa24.77■■□□□ 1.56
CTCF-203ENST00000566078 VDAC1P21796 283 aa24.77■■□□□ 1.56
CTCF-203ENST00000566078 AKR1C2P52895 323 aa24.77■■□□□ 1.56
CTCF-203ENST00000566078 IAH1Q2TAA2 248 aaPredicted RBP24.77■■□□□ 1.56
CTCF-203ENST00000566078 SLC35D1Q9NTN3 355 aa24.77■■□□□ 1.56
CTCF-203ENST00000566078 CCDC168Q8NDH2 2452 aa24.77■■□□□ 1.56
CTCF-203ENST00000566078 LEUTXA8MZ59 168 aa24.76■■□□□ 1.55
CTCF-203ENST00000566078 HPRT1P00492 218 aa24.76■■□□□ 1.55
CTCF-203ENST00000566078 IGKV1-5P01602 117 aa24.76■■□□□ 1.55
CTCF-203ENST00000566078 APOA2P02652 100 aa24.76■■□□□ 1.55
CTCF-203ENST00000566078 UBE2E1P51965 193 aa24.76■■□□□ 1.55
CTCF-203ENST00000566078 TMEM249Q2WGJ8 235 aa24.76■■□□□ 1.55
CTCF-203ENST00000566078 LDLRAD2Q5SZI1 272 aa24.76■■□□□ 1.55
CTCF-203ENST00000566078 C2orf50Q96LR7 162 aa24.76■■□□□ 1.55
CTCF-203ENST00000566078 DPM3Q9P2X0 92 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms