RNA–Protein interactions for RNA: ENST00000566069.5

PALB2-204, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-204ENST00000566069 CMPK1P30085 196 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 ETV6P41212 452 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 CX3CR1P49238 355 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 EMP1P54849 157 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 NDUFA6P56556 154 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 CLDN6P56747 220 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 RPL31P62899 125 aaKnown RBP1.91□□□□□ -2.1
PALB2-204ENST00000566069 GNG5P63218 68 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 SYCNQ0VAF6 134 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 PEA15Q15121 130 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 GUSBP1Q15486 140 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 SNRNP35Q16560 246 aaKnown RBP1.91□□□□□ -2.1
PALB2-204ENST00000566069 TMEM241Q24JQ0 296 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 HLA-DRB5Q30154 266 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 TMEM78Q5T7P6 136 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 C1orf195Q5TG92 126 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 AGTRAPQ6RW13 159 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 IGFL1Q6UW32 110 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 FA2HQ7L5A8 372 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 SLC35E3Q7Z769 313 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 RNF182Q8N6D2 247 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 YIPF7Q8N8F6 280 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 ZNF615Q8N8J6 731 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 WDR31Q8NA23 367 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 GPR32P1Q8NGA4 272 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 OR4S1Q8NGB4 309 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 OR8D4Q8NGM9 314 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 OR1S2Q8NGQ3 325 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 OR13C8Q8NGS7 320 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 OR4X1Q8NH49 305 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 ZNF431Q8TF32 576 aaPredicted RBP1.91□□□□□ -2.1
PALB2-204ENST00000566069 SLC7A6Q92536 515 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 RCN3Q96D15 328 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 MRPS24Q96EL2 167 aaKnown RBP1.91□□□□□ -2.1
PALB2-204ENST00000566069 DYNLL2Q96FJ2 89 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 DIRAS2Q96HU8 199 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 DNAJC30Q96LL9 226 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 LINC00477Q96M19 166 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 CCDC115Q96NT0 180 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 GPR82Q96P67 336 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 TRIB3Q96RU7 358 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 GPER1Q99527 375 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 CDX2Q99626 313 aaPredicted RBP1.91□□□□□ -2.1
PALB2-204ENST00000566069 SULT4A1Q9BR01 284 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 GTSF1LQ9H1H1 148 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 MS4A6AQ9H2W1 248 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 POPDC3Q9HBV1 291 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 FGF20Q9NP95 211 aaPredicted RBP1.91□□□□□ -2.1
PALB2-204ENST00000566069 DOK5Q9P104 306 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 NAT8Q9UHE5 227 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 NAT8BQ9UHF3 227 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 ERG28Q9UKR5 140 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 TRAPPC2LQ9UL33 140 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 RCL1Q9Y2P8 373 aaKnown RBP1.91□□□□□ -2.1
PALB2-204ENST00000566069 LSM5Q9Y4Y9 91 aaKnown RBP1.91□□□□□ -2.1
PALB2-204ENST00000566069 PCYT1BQ9Y5K3 369 aaPredicted RBP1.91□□□□□ -2.1
PALB2-204ENST00000566069 SNX10Q9Y5X0 201 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 ZNF780BQ9Y6R6 833 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 DOCK3Q8IZD9 2030 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 OVOS2A0A0J9YW53 1432 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 RTEL1-TNFRSF6BF6WH68 1400 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 PTPRTO14522 1441 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 MYOM3Q5VTT5 1437 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 OVOS2Q6IE36 1432 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 PTPRJQ12913 1337 aa1.91□□□□□ -2.1
PALB2-204ENST00000566069 PCF11O94913 1555 aaKnown RBP1.9□□□□□ -2.1
PALB2-204ENST00000566069 SCAF11Q99590 1463 aaKnown RBP1.9□□□□□ -2.11
PALB2-204ENST00000566069 ARHGAP35Q9NRY4 1499 aa1.9□□□□□ -2.11
PALB2-204ENST00000566069 PLXND1Q9Y4D7 1925 aa1.9□□□□□ -2.11
PALB2-204ENST00000566069 MYO5BQ9ULV0 1848 aa1.9□□□□□ -2.11
PALB2-204ENST00000566069 TMEM223A0PJW6 202 aa1.9□□□□□ -2.11
PALB2-204ENST00000566069 DAPL1A0PJW8 107 aa1.9□□□□□ -2.11
PALB2-204ENST00000566069 COLCA2A8K830 154 aa1.9□□□□□ -2.11
PALB2-204ENST00000566069 RBFOX2O43251 390 aaKnown RBP eCLIP1.9□□□□□ -2.11
PALB2-204ENST00000566069 YIF1AO95070 293 aa1.9□□□□□ -2.11
PALB2-204ENST00000566069 HPRT1P00492 218 aa1.9□□□□□ -2.11
PALB2-204ENST00000566069 MT-ND4LP03901 98 aa1.9□□□□□ -2.11
PALB2-204ENST00000566069 OPN1SWP03999 348 aa1.9□□□□□ -2.11
PALB2-204ENST00000566069 SERPINE1P05121 402 aa1.9□□□□□ -2.11
PALB2-204ENST00000566069 REG1AP05451 166 aa1.9□□□□□ -2.11
PALB2-204ENST00000566069 SULT1A3P0DMM9 295 aa1.9□□□□□ -2.11
PALB2-204ENST00000566069 SULT1A4P0DMN0 295 aa1.9□□□□□ -2.11
PALB2-204ENST00000566069 HTR1DP28221 377 aa1.9□□□□□ -2.11
PALB2-204ENST00000566069 ZNF138P52744 262 aa1.9□□□□□ -2.11
PALB2-204ENST00000566069 BTG2P78543 158 aa1.9□□□□□ -2.11
PALB2-204ENST00000566069 RUNX1Q01196 453 aa1.9□□□□□ -2.11
PALB2-204ENST00000566069 FMODQ06828 376 aa1.9□□□□□ -2.11
PALB2-204ENST00000566069 LOXL1Q08397 574 aaPredicted RBP1.9□□□□□ -2.11
PALB2-204ENST00000566069 JOSD1Q15040 202 aaPredicted RBP1.9□□□□□ -2.11
PALB2-204ENST00000566069 OR8B8Q15620 311 aa1.9□□□□□ -2.11
PALB2-204ENST00000566069 SPATA31B1PQ5VZV4 182 aa1.9□□□□□ -2.11
PALB2-204ENST00000566069 PRSS54Q6PEW0 395 aa1.9□□□□□ -2.11
PALB2-204ENST00000566069 OPN5Q6U736 354 aa1.9□□□□□ -2.11
PALB2-204ENST00000566069 ALKAL2Q6UX46 152 aa1.9□□□□□ -2.11
PALB2-204ENST00000566069 NTM-AS1Q6ZSK4 140 aa1.9□□□□□ -2.11
PALB2-204ENST00000566069 GTF2H5Q6ZYL4 71 aa1.9□□□□□ -2.11
PALB2-204ENST00000566069 FAM19A5Q7Z5A7 132 aaPredicted RBP1.9□□□□□ -2.11
PALB2-204ENST00000566069 WDR86Q86TI4 376 aa1.9□□□□□ -2.11
PALB2-204ENST00000566069 CALHM3Q86XJ0 350 aa1.9□□□□□ -2.11
PALB2-204ENST00000566069 UMODL1-AS1Q8N2C9 162 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms