RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 LRRC75BQ2VPJ9 315 aa6.29□□□□□ -1.4
CDH1-208ENST00000565810 DEFB112Q30KQ8 113 aa6.29□□□□□ -1.4
CDH1-208ENST00000565810 TMEM128Q5BJH2 165 aa6.29□□□□□ -1.4
CDH1-208ENST00000565810 LDLRAD2Q5SZI1 272 aa6.29□□□□□ -1.4
CDH1-208ENST00000565810 KCTD9Q7L273 389 aa6.29□□□□□ -1.4
CDH1-208ENST00000565810 TBC1D26Q86UD7 250 aa6.29□□□□□ -1.4
CDH1-208ENST00000565810 BCL6BQ8N143 479 aaPredicted RBP6.29□□□□□ -1.4
CDH1-208ENST00000565810 TCTEX1D1Q8N7M0 179 aa6.29□□□□□ -1.4
CDH1-208ENST00000565810 DRAXINQ8NBI3 349 aaPredicted RBP6.29□□□□□ -1.4
CDH1-208ENST00000565810 OR51H1Q8NH63 302 aa6.29□□□□□ -1.4
CDH1-208ENST00000565810 CD300LFQ8TDQ1 290 aa6.29□□□□□ -1.4
CDH1-208ENST00000565810 C17orf50Q8WW18 174 aa6.29□□□□□ -1.4
CDH1-208ENST00000565810 MRGPRFQ96AM1 343 aa6.29□□□□□ -1.4
CDH1-208ENST00000565810 SSX3Q99909 188 aa6.29□□□□□ -1.4
CDH1-208ENST00000565810 RTBDNQ9BSG5 229 aaPredicted RBP6.29□□□□□ -1.4
CDH1-208ENST00000565810 C20orf85Q9H1P6 137 aa6.29□□□□□ -1.4
CDH1-208ENST00000565810 OCEL1Q9H607 264 aa6.29□□□□□ -1.4
CDH1-208ENST00000565810 SLC35D1Q9NTN3 355 aa6.29□□□□□ -1.4
CDH1-208ENST00000565810 LIN7CQ9NUP9 197 aaKnown RBP6.29□□□□□ -1.4
CDH1-208ENST00000565810 NUDT15Q9NV35 164 aa6.29□□□□□ -1.4
CDH1-208ENST00000565810 CELSR1Q9NYQ6 3014 aa6.29□□□□□ -1.4
CDH1-208ENST00000565810 IGHV3-72A0A0B4J1Y9 119 aa6.28□□□□□ -1.4
CDH1-208ENST00000565810 PIGBOS1A0A0B4J2F0 54 aa6.28□□□□□ -1.4
CDH1-208ENST00000565810 C3orf85A0A1B0GTC6 90 aa6.28□□□□□ -1.4
CDH1-208ENST00000565810 A0A1W2PPI3 338 aa6.28□□□□□ -1.4
CDH1-208ENST00000565810 INMT-MINDY4F8WBC2 141 aa6.28□□□□□ -1.4
CDH1-208ENST00000565810 H0YJW9 148 aa6.28□□□□□ -1.4
CDH1-208ENST00000565810 FCGR3BO75015 233 aa6.28□□□□□ -1.4
CDH1-208ENST00000565810 PROP1O75360 226 aa6.28□□□□□ -1.4
CDH1-208ENST00000565810 SERPINE2P07093 398 aa6.28□□□□□ -1.4
CDH1-208ENST00000565810 F2RP25116 425 aa6.28□□□□□ -1.4
CDH1-208ENST00000565810 DHODHQ02127 395 aa6.28□□□□□ -1.4
CDH1-208ENST00000565810 HES1Q14469 280 aa6.28□□□□□ -1.4
CDH1-208ENST00000565810 TRIM16LQ309B1 348 aa6.28□□□□□ -1.4
CDH1-208ENST00000565810 C4orf46Q504U0 113 aa6.28□□□□□ -1.4
CDH1-208ENST00000565810 DHRS7BQ6IAN0 325 aaPredicted RBP6.28□□□□□ -1.4
CDH1-208ENST00000565810 CCBE1Q6UXH8 406 aaPredicted RBP6.28□□□□□ -1.4
CDH1-208ENST00000565810 GLDNQ6ZMI3 551 aaPredicted RBP6.28□□□□□ -1.4
CDH1-208ENST00000565810 SLC25A42Q86VD7 318 aa6.28□□□□□ -1.4
CDH1-208ENST00000565810 THNSL2Q86YJ6 484 aa6.28□□□□□ -1.4
CDH1-208ENST00000565810 PDPNQ86YL7 162 aa6.28□□□□□ -1.4
CDH1-208ENST00000565810 SPAG16Q8N0X2 631 aa6.28□□□□□ -1.4
CDH1-208ENST00000565810 DYNAPQ8N1N2 210 aa6.28□□□□□ -1.4
CDH1-208ENST00000565810 ZNF383Q8NA42 475 aa6.28□□□□□ -1.4
CDH1-208ENST00000565810 MINDY2Q8NBR6 621 aa6.28□□□□□ -1.4
CDH1-208ENST00000565810 ADAD2Q8NCV1 583 aaKnown RBP6.28□□□□□ -1.4
CDH1-208ENST00000565810 OR5AN1Q8NGI8 311 aa6.28□□□□□ -1.4
CDH1-208ENST00000565810 OR4S2Q8NH73 311 aa6.28□□□□□ -1.4
CDH1-208ENST00000565810 OR5R1Q8NH85 324 aa6.28□□□□□ -1.4
CDH1-208ENST00000565810 ZNF418Q8TF45 676 aaPredicted RBP6.28□□□□□ -1.4
CDH1-208ENST00000565810 FLYWCH2Q96CP2 140 aaKnown RBP6.28□□□□□ -1.4
CDH1-208ENST00000565810 C5orf30Q96GV9 206 aa6.28□□□□□ -1.4
CDH1-208ENST00000565810 AIFM2Q9BRQ8 373 aa6.28□□□□□ -1.4
CDH1-208ENST00000565810 NAA60Q9H7X0 242 aa6.28□□□□□ -1.4
CDH1-208ENST00000565810 PITPNC1Q9UKF7 332 aa6.28□□□□□ -1.4
CDH1-208ENST00000565810 FLVCR2Q9UPI3 526 aa6.28□□□□□ -1.4
CDH1-208ENST00000565810 WASHC3Q9Y3C0 194 aa6.28□□□□□ -1.4
CDH1-208ENST00000565810 SETXQ7Z333 2677 aaKnown RBP6.28□□□□□ -1.4
CDH1-208ENST00000565810 WNK2Q9Y3S1 2297 aa6.28□□□□□ -1.4
CDH1-208ENST00000565810 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.27□□□□□ -1.41
CDH1-208ENST00000565810 TEX15Q9BXT5 2789 aa6.27□□□□□ -1.41
CDH1-208ENST00000565810 CR1P17927 2039 aa6.27□□□□□ -1.41
CDH1-208ENST00000565810 CRYM-AS1A6NIL9 109 aa6.27□□□□□ -1.41
CDH1-208ENST00000565810 LINC00473A8K010 186 aa6.27□□□□□ -1.41
CDH1-208ENST00000565810 VGLL3A8MV65 326 aa6.27□□□□□ -1.41
CDH1-208ENST00000565810 H0Y980 276 aa6.27□□□□□ -1.41
CDH1-208ENST00000565810 SHOXO15266 292 aa6.27□□□□□ -1.41
CDH1-208ENST00000565810 PEX14O75381 377 aa6.27□□□□□ -1.41
CDH1-208ENST00000565810 CRLF1O75462 422 aa6.27□□□□□ -1.41
CDH1-208ENST00000565810 ATG12O94817 140 aa6.27□□□□□ -1.41
CDH1-208ENST00000565810 HPRT1P00492 218 aa6.27□□□□□ -1.41
CDH1-208ENST00000565810 IFNA2P01563 188 aa6.27□□□□□ -1.41
CDH1-208ENST00000565810 IGKV1D-33P01593 117 aa6.27□□□□□ -1.41
CDH1-208ENST00000565810 IGKV1-33P01594 117 aa6.27□□□□□ -1.41
CDH1-208ENST00000565810 OR4E1P0C645 316 aa6.27□□□□□ -1.41
CDH1-208ENST00000565810 FAM157CP0CG43 387 aa6.27□□□□□ -1.41
CDH1-208ENST00000565810 RPA2P15927 270 aa6.27□□□□□ -1.41
CDH1-208ENST00000565810 ANXA7P20073 488 aaKnown RBP6.27□□□□□ -1.41
CDH1-208ENST00000565810 VAMP1P23763 118 aa6.27□□□□□ -1.41
CDH1-208ENST00000565810 PAX6P26367 422 aa6.27□□□□□ -1.41
CDH1-208ENST00000565810 DYNLT3P51808 116 aa6.27□□□□□ -1.41
CDH1-208ENST00000565810 RAG2P55895 527 aa6.27□□□□□ -1.41
CDH1-208ENST00000565810 LINC00205P59089 165 aa6.27□□□□□ -1.41
CDH1-208ENST00000565810 RPS16P62249 146 aaKnown RBP6.27□□□□□ -1.41
CDH1-208ENST00000565810 RPL30P62888 115 aaKnown RBP6.27□□□□□ -1.41
CDH1-208ENST00000565810 EIF4EBP1Q13541 118 aaPredicted RBP6.27□□□□□ -1.41
CDH1-208ENST00000565810 HABP2Q14520 560 aaPredicted RBP6.27□□□□□ -1.41
CDH1-208ENST00000565810 OR2B11Q5JQS5 317 aa6.27□□□□□ -1.41
CDH1-208ENST00000565810 Q6YL49 198 aa6.27□□□□□ -1.41
CDH1-208ENST00000565810 SIGLECL1Q8N7X8 197 aa6.27□□□□□ -1.41
CDH1-208ENST00000565810 OR4C13Q8NGP0 309 aa6.27□□□□□ -1.41
CDH1-208ENST00000565810 OR2T10Q8NGZ9 312 aa6.27□□□□□ -1.41
CDH1-208ENST00000565810 SSMEM1Q8WWF3 244 aa6.27□□□□□ -1.41
CDH1-208ENST00000565810 AJUBAQ96IF1 538 aa6.27□□□□□ -1.41
CDH1-208ENST00000565810 JMJD8Q96S16 334 aa6.27□□□□□ -1.41
CDH1-208ENST00000565810 GPHA2Q96T91 129 aa6.27□□□□□ -1.41
CDH1-208ENST00000565810 RNF5Q99942 180 aa6.27□□□□□ -1.41
CDH1-208ENST00000565810 ALX4Q9H161 411 aaPredicted RBP6.27□□□□□ -1.41
CDH1-208ENST00000565810 BEX1Q9HBH7 125 aa6.27□□□□□ -1.41
CDH1-208ENST00000565810 GPN1Q9HCN4 374 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms