RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 A3GALT2U3KPV4 340 aa15.4■□□□□ 0.06
CLN6-206ENST00000565471 TRBV6-7A0A0A0MS04 114 aa15.39■□□□□ 0.05
CLN6-206ENST00000565471 M0R1X1 148 aa15.39■□□□□ 0.05
CLN6-206ENST00000565471 CA2P00918 260 aa15.39■□□□□ 0.05
CLN6-206ENST00000565471 HIST1H1DP16402 221 aaKnown RBP15.39■□□□□ 0.05
CLN6-206ENST00000565471 RAB3BP20337 219 aa15.39■□□□□ 0.05
CLN6-206ENST00000565471 LINC00205P59089 165 aa15.39■□□□□ 0.05
CLN6-206ENST00000565471 ACTBL2Q562R1 376 aa15.39■□□□□ 0.05
CLN6-206ENST00000565471 OR10J5Q8NHC4 309 aa15.39■□□□□ 0.05
CLN6-206ENST00000565471 FLYWCH2Q96CP2 140 aaKnown RBP15.39■□□□□ 0.05
CLN6-206ENST00000565471 CLCC1Q96S66 551 aa15.39■□□□□ 0.05
CLN6-206ENST00000565471 TPSG1Q9NRR2 321 aa15.39■□□□□ 0.05
CLN6-206ENST00000565471 COL7A1Q02388 2944 aa15.39■□□□□ 0.05
CLN6-206ENST00000565471 METTL21EPA6NDL7 271 aa15.38■□□□□ 0.05
CLN6-206ENST00000565471 LINC01619G3V211 115 aa15.38■□□□□ 0.05
CLN6-206ENST00000565471 OVOL1O14753 267 aa15.38■□□□□ 0.05
CLN6-206ENST00000565471 BET1O15155 118 aa15.38■□□□□ 0.05
CLN6-206ENST00000565471 GSTT2P0CG29 244 aa15.38■□□□□ 0.05
CLN6-206ENST00000565471 GSTT2BP0CG30 244 aa15.38■□□□□ 0.05
CLN6-206ENST00000565471 GNB3P16520 340 aa15.38■□□□□ 0.05
CLN6-206ENST00000565471 SRSF7Q16629 238 aaKnown RBP eCLIP15.38■□□□□ 0.05
CLN6-206ENST00000565471 IGSF11Q5DX21 431 aa15.38■□□□□ 0.05
CLN6-206ENST00000565471 ZNF429Q86V71 674 aa15.38■□□□□ 0.05
CLN6-206ENST00000565471 LFNGQ8NES3 379 aa15.38■□□□□ 0.05
CLN6-206ENST00000565471 DCUN1D4Q92564 292 aa15.38■□□□□ 0.05
CLN6-206ENST00000565471 ARPC1AQ92747 370 aa15.38■□□□□ 0.05
CLN6-206ENST00000565471 FAM103A1Q9BTL3 118 aaKnown RBP15.38■□□□□ 0.05
CLN6-206ENST00000565471 CENPOQ9BU64 300 aa15.38■□□□□ 0.05
CLN6-206ENST00000565471 ALX4Q9H161 411 aaPredicted RBP15.38■□□□□ 0.05
CLN6-206ENST00000565471 OR2D2Q9H210 308 aa15.38■□□□□ 0.05
CLN6-206ENST00000565471 SLA2Q9H6Q3 261 aa15.38■□□□□ 0.05
CLN6-206ENST00000565471 SLC35D1Q9NTN3 355 aa15.38■□□□□ 0.05
CLN6-206ENST00000565471 OR8U9P0C7N5 309 aa15.37■□□□□ 0.05
CLN6-206ENST00000565471 NHLRC4P0CG21 123 aaPredicted RBP15.37■□□□□ 0.05
CLN6-206ENST00000565471 CD40LGP29965 261 aa15.37■□□□□ 0.05
CLN6-206ENST00000565471 TAGLNQ01995 201 aaKnown RBP15.37■□□□□ 0.05
CLN6-206ENST00000565471 ARL6IP1Q15041 203 aa15.37■□□□□ 0.05
CLN6-206ENST00000565471 UBE2UQ5VVX9 321 aa15.37■□□□□ 0.05
CLN6-206ENST00000565471 Q6ZS49 121 aa15.37■□□□□ 0.05
CLN6-206ENST00000565471 CASTOR1Q8WTX7 329 aa15.37■□□□□ 0.05
CLN6-206ENST00000565471 SDHAF2Q9NX18 166 aa15.37■□□□□ 0.05
CLN6-206ENST00000565471 SLC25A17O43808 307 aa15.36■□□□□ 0.05
CLN6-206ENST00000565471 LGALS7P47929 136 aa15.36■□□□□ 0.05
CLN6-206ENST00000565471 FXYD3Q14802 87 aa15.36■□□□□ 0.05
CLN6-206ENST00000565471 C22orf42Q6IC83 251 aa15.36■□□□□ 0.05
CLN6-206ENST00000565471 NR2C2APQ86WQ0 139 aa15.36■□□□□ 0.05
CLN6-206ENST00000565471 DLX4Q92988 240 aaPredicted RBP15.36■□□□□ 0.05
CLN6-206ENST00000565471 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.36■□□□□ 0.05
CLN6-206ENST00000565471 A0A075B6Q4 140 aa15.35■□□□□ 0.05
CLN6-206ENST00000565471 IGHV4OR15-8A0A075B7B6 117 aa15.35■□□□□ 0.05
CLN6-206ENST00000565471 A0A087WW49 117 aa15.35■□□□□ 0.05
CLN6-206ENST00000565471 A0A0B4J203 849 aa15.35■□□□□ 0.05
CLN6-206ENST00000565471 ARPC1BO15143 372 aaKnown RBP15.35■□□□□ 0.05
CLN6-206ENST00000565471 IGLV2-23P01705 113 aa15.35■□□□□ 0.05
CLN6-206ENST00000565471 SNRPBP14678 240 aaKnown RBP15.35■□□□□ 0.05
CLN6-206ENST00000565471 FGF9P31371 208 aaPredicted RBP15.35■□□□□ 0.05
CLN6-206ENST00000565471 SLURP1P55000 103 aa15.35■□□□□ 0.05
CLN6-206ENST00000565471 TPPP2P59282 170 aa15.35■□□□□ 0.05
CLN6-206ENST00000565471 ARFRP1Q13795 201 aa15.35■□□□□ 0.05
CLN6-206ENST00000565471 MAFIPQ8WZ33 124 aa15.35■□□□□ 0.05
CLN6-206ENST00000565471 RHOVQ96L33 236 aa15.35■□□□□ 0.05
CLN6-206ENST00000565471 WWC2-AS2Q96NR7 200 aa15.35■□□□□ 0.05
CLN6-206ENST00000565471 ZNF230Q9UIE0 474 aaPredicted RBP15.35■□□□□ 0.05
CLN6-206ENST00000565471 H3BUA1 57 aa15.34■□□□□ 0.05
CLN6-206ENST00000565471 HSPB1P04792 205 aaKnown RBP15.34■□□□□ 0.05
CLN6-206ENST00000565471 CRYGBP07316 175 aa15.34■□□□□ 0.05
CLN6-206ENST00000565471 TALDO1P37837 337 aa15.34■□□□□ 0.05
CLN6-206ENST00000565471 SSBP2P81877 361 aaPredicted RBP15.34■□□□□ 0.05
CLN6-206ENST00000565471 CBX3Q13185 183 aa15.34■□□□□ 0.05
CLN6-206ENST00000565471 TMEM177Q53S58 311 aa15.34■□□□□ 0.05
CLN6-206ENST00000565471 GRPEL2Q8TAA5 225 aa15.34■□□□□ 0.05
CLN6-206ENST00000565471 FCGR1BQ92637 280 aa15.34■□□□□ 0.05
CLN6-206ENST00000565471 C5orf30Q96GV9 206 aa15.34■□□□□ 0.05
CLN6-206ENST00000565471 HARBI1Q96MB7 349 aa15.34■□□□□ 0.05
CLN6-206ENST00000565471 MS4A10Q96PG2 267 aa15.34■□□□□ 0.05
CLN6-206ENST00000565471 GINS4Q9BRT9 223 aa15.34■□□□□ 0.05
CLN6-206ENST00000565471 ATG5Q9H1Y0 275 aa15.34■□□□□ 0.05
CLN6-206ENST00000565471 NOTOA8MTQ0 251 aa15.33■□□□□ 0.04
CLN6-206ENST00000565471 SAP30O75446 220 aa15.33■□□□□ 0.04
CLN6-206ENST00000565471 IGHV3-11P01762 117 aa15.33■□□□□ 0.04
CLN6-206ENST00000565471 TRGV3P03979 118 aa15.33■□□□□ 0.04
CLN6-206ENST00000565471 RRASP10301 218 aa15.33■□□□□ 0.04
CLN6-206ENST00000565471 DTYMKP23919 212 aa15.33■□□□□ 0.04
CLN6-206ENST00000565471 RTL8BQ17RB0 113 aa15.33■□□□□ 0.04
CLN6-206ENST00000565471 ACSM6Q6P461 480 aa15.33■□□□□ 0.04
CLN6-206ENST00000565471 H1FOOQ8IZA3 346 aaPredicted RBP15.33■□□□□ 0.04
CLN6-206ENST00000565471 SPARTQ8N0X7 666 aa15.33■□□□□ 0.04
CLN6-206ENST00000565471 ADTRPQ96IZ2 230 aa15.33■□□□□ 0.04
CLN6-206ENST00000565471 TMEM68Q96MH6 324 aa15.33■□□□□ 0.04
CLN6-206ENST00000565471 RBM7Q9Y580 266 aaKnown RBP15.33■□□□□ 0.04
CLN6-206ENST00000565471 CNIH1O95406 144 aa15.32■□□□□ 0.04
CLN6-206ENST00000565471 ATP6V1G2O95670 118 aa15.32■□□□□ 0.04
CLN6-206ENST00000565471 LY86O95711 162 aa15.32■□□□□ 0.04
CLN6-206ENST00000565471 PSMB9P28065 219 aa15.32■□□□□ 0.04
CLN6-206ENST00000565471 TPRA1Q86W33 373 aa15.32■□□□□ 0.04
CLN6-206ENST00000565471 POC5Q8NA72 575 aa15.32■□□□□ 0.04
CLN6-206ENST00000565471 BVESQ8NE79 360 aa15.32■□□□□ 0.04
CLN6-206ENST00000565471 Q9H521 79 aa15.32■□□□□ 0.04
CLN6-206ENST00000565471 TXNL4BQ9NX01 149 aaKnown RBP15.32■□□□□ 0.04
CLN6-206ENST00000565471 STUB1Q9UNE7 303 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms