RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 GNRHR2Q96P88 292 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 ZNF430Q9H8G1 570 aaPredicted RBP4.44□□□□□ -1.7
SMG1-211ENST00000565324 RNF186Q9NXI6 227 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 ELOVL5Q9NYP7 299 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 ZNF257Q9Y2Q1 563 aa4.44□□□□□ -1.7
SMG1-211ENST00000565324 NHLRC3Q5JS37 347 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.43□□□□□ -1.7
SMG1-211ENST00000565324 POC1AQ8NBT0 407 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 CEP250Q9BV73 2442 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 POLEQ07864 2286 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 RALGAPA2Q2PPJ7 1873 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 TRAV8-2A0A0B4J237 113 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 C3orf80F5H4A9 247 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 NKX2-8O15522 239 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 SBK3P0C264 359 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 UCP3P55916 312 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 RPL31P62899 125 aaKnown RBP4.43□□□□□ -1.7
SMG1-211ENST00000565324 S100A7L2Q5SY68 101 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 C8orf44Q96CB5 159 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 G6PC2Q9NQR9 355 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 PSME4Q14997 1843 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 HOXA5P20719 270 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 CX3CL1P78423 397 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 C17orf99Q6UX52 265 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 CYSLTR1Q9Y271 337 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 ASPDHA6ND91 283 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 WNT5AP41221 380 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 RBM11P57052 281 aaKnown RBP4.43□□□□□ -1.7
SMG1-211ENST00000565324 LOXL3P58215 753 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 TMEM95Q3KNT9 176 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 KRTCAP3Q53RY4 240 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 MARS2Q96GW9 593 aaKnown RBP4.43□□□□□ -1.7
SMG1-211ENST00000565324 OVOL2Q9BRP0 275 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 NPDC1Q9NQX5 325 aaPredicted RBP4.43□□□□□ -1.7
SMG1-211ENST00000565324 CCL28Q9NRJ3 127 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 TRAV8-4A0A0B4J246 113 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 PGPEP1LA6NFU8 196 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 ZNF815PA8K554 130 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 DMRTA2Q96SC8 542 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 MS4A5Q9H3V2 200 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 NCOR1P1Q9H4R4 102 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 TNFRSF19Q9NS68 423 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 FLRT3Q9NZU0 649 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 PTPRZ1P23471 2315 aaPredicted RBP4.43□□□□□ -1.7
SMG1-211ENST00000565324 FAM157AC9JC47 383 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 PLA2G10O15496 165 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 ERGP11308 486 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 CNTFRP26992 372 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 RAE1P78406 368 aaKnown RBP4.43□□□□□ -1.7
SMG1-211ENST00000565324 SRSF6Q13247 344 aaKnown RBP4.43□□□□□ -1.7
SMG1-211ENST00000565324 ZNF79Q15937 498 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 ZNF660Q6AZW8 331 aaPredicted RBP4.43□□□□□ -1.7
SMG1-211ENST00000565324 KIR3DL3Q8N743 410 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 RGP1Q92546 391 aaPredicted RBP4.43□□□□□ -1.7
SMG1-211ENST00000565324 CCL26Q9Y258 94 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 TRBV7-9A0A0J9YWB2 115 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 A0A1B0GUT8 65 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 VKORC1L1Q8N0U8 176 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 CIARTQ8N365 385 aaPredicted RBP4.43□□□□□ -1.7
SMG1-211ENST00000565324 C6orf106Q9H6K1 298 aaPredicted RBP4.43□□□□□ -1.7
SMG1-211ENST00000565324 GSN-AS1Q9NRJ2 163 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 SLC6A13Q9NSD5 602 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 CARHSP1Q9Y2V2 147 aaKnown RBP4.43□□□□□ -1.7
SMG1-211ENST00000565324 PLXNA3P51805 1871 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 FAM181BA6NEQ2 426 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 A8MWV9 139 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 NPFFO15130 113 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 HLA-DQB1P01920 261 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 ANKRD34AQ69YU3 496 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 YAE1D1Q9NRH1 226 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 IGHV3-43A0A0B4J1X8 118 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 FAM106CPP0CH98 169 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 IGHV3-43DP0DP04 118 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 HMGA1P17096 107 aaKnown RBP4.43□□□□□ -1.7
SMG1-211ENST00000565324 ZNF146Q15072 292 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 TMEM170BQ5T4T1 132 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 LDLRAD1Q5T700 205 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 OR1K1Q8NGR3 316 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 OR2H1Q9GZK4 316 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 CRISPLD2Q9H0B8 497 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 ASB1Q9Y576 335 aa4.43□□□□□ -1.7
SMG1-211ENST00000565324 A0A1B0GTH9 108 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 RCC1P18754 421 aaPredicted RBP4.42□□□□□ -1.7
SMG1-211ENST00000565324 ZNF324BQ6AW86 544 aaPredicted RBP4.42□□□□□ -1.7
SMG1-211ENST00000565324 PLPPR2Q96GM1 343 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 MS4A6AQ9H2W1 248 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 PRDM13Q9H4Q3 707 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 ATRXP46100 2492 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 TRGV8A0A0C4DH27 118 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 LIPT2A6NK58 231 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 RPL27AP46776 148 aaKnown RBP4.42□□□□□ -1.7
SMG1-211ENST00000565324 GGTLC2Q14390 218 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 CT83Q5H943 113 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 PTPRFP10586 1907 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 CD3EP07766 207 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 MBNL2Q5VZF2 373 aaKnown RBP4.42□□□□□ -1.7
SMG1-211ENST00000565324 PTCRAQ6ISU1 281 aaPredicted RBP4.42□□□□□ -1.7
SMG1-211ENST00000565324 ATOH7Q8N100 152 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 FMC1Q96HJ9 113 aa4.42□□□□□ -1.7
SMG1-211ENST00000565324 TLNRD1Q9H1K6 362 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms