RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 PLAC9Q5JTB6 97 aa9.42□□□□□ -0.9
GTF3C1-204ENST00000564664 ACSM6Q6P461 480 aa9.42□□□□□ -0.9
GTF3C1-204ENST00000564664 ZNF383Q8NA42 475 aa9.42□□□□□ -0.9
GTF3C1-204ENST00000564664 LFNGQ8NES3 379 aa9.42□□□□□ -0.9
GTF3C1-204ENST00000564664 OR6Q1Q8NGQ2 317 aa9.42□□□□□ -0.9
GTF3C1-204ENST00000564664 OR10J5Q8NHC4 309 aa9.42□□□□□ -0.9
GTF3C1-204ENST00000564664 NRG4Q8WWG1 115 aa9.42□□□□□ -0.9
GTF3C1-204ENST00000564664 DLX4Q92988 240 aaPredicted RBP9.42□□□□□ -0.9
GTF3C1-204ENST00000564664 RAB3CQ96E17 227 aa9.42□□□□□ -0.9
GTF3C1-204ENST00000564664 OR5B12Q96R08 314 aa9.42□□□□□ -0.9
GTF3C1-204ENST00000564664 BLOC1S6Q9UL45 172 aa9.42□□□□□ -0.9
GTF3C1-204ENST00000564664 FBXO7Q9Y3I1 522 aa9.42□□□□□ -0.9
GTF3C1-204ENST00000564664 KMT2CQ8NEZ4 4911 aaKnown RBP9.41□□□□□ -0.9
GTF3C1-204ENST00000564664 TRBV6-7A0A0A0MS04 114 aa9.41□□□□□ -0.9
GTF3C1-204ENST00000564664 IGKV1-6A0A0C4DH72 117 aa9.41□□□□□ -0.9
GTF3C1-204ENST00000564664 TMEM272A0A1B0GTI8 110 aa9.41□□□□□ -0.9
GTF3C1-204ENST00000564664 METTL21EPA6NDL7 271 aa9.41□□□□□ -0.9
GTF3C1-204ENST00000564664 FABP7O15540 132 aa9.41□□□□□ -0.9
GTF3C1-204ENST00000564664 SAP30O75446 220 aa9.41□□□□□ -0.9
GTF3C1-204ENST00000564664 LY86O95711 162 aa9.41□□□□□ -0.9
GTF3C1-204ENST00000564664 IGKV1-16P04430 117 aa9.41□□□□□ -0.9
GTF3C1-204ENST00000564664 RAB6AP20340 208 aa9.41□□□□□ -0.9
GTF3C1-204ENST00000564664 CBX3Q13185 183 aa9.41□□□□□ -0.9
GTF3C1-204ENST00000564664 FXYD3Q14802 87 aa9.41□□□□□ -0.9
GTF3C1-204ENST00000564664 TBCEQ15813 527 aaPredicted RBP9.41□□□□□ -0.9
GTF3C1-204ENST00000564664 Q6ZS49 121 aa9.41□□□□□ -0.9
GTF3C1-204ENST00000564664 ZNF367Q7RTV3 350 aa9.41□□□□□ -0.9
GTF3C1-204ENST00000564664 DRAXINQ8NBI3 349 aaPredicted RBP9.41□□□□□ -0.9
GTF3C1-204ENST00000564664 ARPC1AQ92747 370 aa9.41□□□□□ -0.9
GTF3C1-204ENST00000564664 CLCC1Q96S66 551 aa9.41□□□□□ -0.9
GTF3C1-204ENST00000564664 ELOVL1Q9BW60 279 aa9.41□□□□□ -0.9
GTF3C1-204ENST00000564664 RANGRFQ9HD47 186 aaPredicted RBP9.41□□□□□ -0.9
GTF3C1-204ENST00000564664 A3GALT2U3KPV4 340 aa9.41□□□□□ -0.9
GTF3C1-204ENST00000564664 C3orf84H3BNL1 204 aa9.4□□□□□ -0.9
GTF3C1-204ENST00000564664 M0R1X1 148 aa9.4□□□□□ -0.9
GTF3C1-204ENST00000564664 MRPS14O60783 128 aaKnown RBP9.4□□□□□ -0.9
GTF3C1-204ENST00000564664 CNIH1O95406 144 aa9.4□□□□□ -0.9
GTF3C1-204ENST00000564664 CA2P00918 260 aa9.4□□□□□ -0.9
GTF3C1-204ENST00000564664 ZP3P21754 424 aa9.4□□□□□ -0.9
GTF3C1-204ENST00000564664 CLDN12P56749 244 aa9.4□□□□□ -0.9
GTF3C1-204ENST00000564664 TPPP2P59282 170 aa9.4□□□□□ -0.9
GTF3C1-204ENST00000564664 OR10R2Q8NGX6 335 aa9.4□□□□□ -0.9
GTF3C1-204ENST00000564664 ADTRPQ96IZ2 230 aa9.4□□□□□ -0.9
GTF3C1-204ENST00000564664 OR4C12Q96R67 309 aa9.4□□□□□ -0.9
GTF3C1-204ENST00000564664 CABLES2Q9BTV7 478 aa9.4□□□□□ -0.9
GTF3C1-204ENST00000564664 SLC35D1Q9NTN3 355 aa9.4□□□□□ -0.9
GTF3C1-204ENST00000564664 KCNK7Q9Y2U2 307 aa9.4□□□□□ -0.9
GTF3C1-204ENST00000564664 IGHV4OR15-8A0A075B7B6 117 aa9.39□□□□□ -0.91
GTF3C1-204ENST00000564664 A0A087WW49 117 aa9.39□□□□□ -0.91
GTF3C1-204ENST00000564664 C13orf42A0A1B0GVH6 325 aa9.39□□□□□ -0.91
GTF3C1-204ENST00000564664 TRDV1A0A1B0GX56 115 aa9.39□□□□□ -0.91
GTF3C1-204ENST00000564664 IFITM5A6NNB3 132 aa9.39□□□□□ -0.91
GTF3C1-204ENST00000564664 SLC25A17O43808 307 aa9.39□□□□□ -0.91
GTF3C1-204ENST00000564664 TRGV3P03979 118 aa9.39□□□□□ -0.91
GTF3C1-204ENST00000564664 CRYGBP07316 175 aa9.39□□□□□ -0.91
GTF3C1-204ENST00000564664 FCGR3AP08637 254 aa9.39□□□□□ -0.91
GTF3C1-204ENST00000564664 AADACP22760 399 aa9.39□□□□□ -0.91
GTF3C1-204ENST00000564664 MYL9P24844 172 aa9.39□□□□□ -0.91
GTF3C1-204ENST00000564664 TALDO1P37837 337 aa9.39□□□□□ -0.91
GTF3C1-204ENST00000564664 MAP2K4P45985 399 aa9.39□□□□□ -0.91
GTF3C1-204ENST00000564664 SLURP1P55000 103 aa9.39□□□□□ -0.91
GTF3C1-204ENST00000564664 PITPNAQ00169 270 aa9.39□□□□□ -0.91
GTF3C1-204ENST00000564664 SSX1Q16384 188 aa9.39□□□□□ -0.91
GTF3C1-204ENST00000564664 RTL8BQ17RB0 113 aa9.39□□□□□ -0.91
GTF3C1-204ENST00000564664 TMEM177Q53S58 311 aa9.39□□□□□ -0.91
GTF3C1-204ENST00000564664 HES5Q5TA89 166 aa9.39□□□□□ -0.91
GTF3C1-204ENST00000564664 POC5Q8NA72 575 aa9.39□□□□□ -0.91
GTF3C1-204ENST00000564664 MS4A10Q96PG2 267 aa9.39□□□□□ -0.91
GTF3C1-204ENST00000564664 FAM103A1Q9BTL3 118 aaKnown RBP9.39□□□□□ -0.91
GTF3C1-204ENST00000564664 ALX4Q9H161 411 aaPredicted RBP9.39□□□□□ -0.91
GTF3C1-204ENST00000564664 NDUFB11Q9NX14 153 aa9.39□□□□□ -0.91
GTF3C1-204ENST00000564664 SDHAF2Q9NX18 166 aa9.39□□□□□ -0.91
GTF3C1-204ENST00000564664 RAB27BO00194 218 aa9.38□□□□□ -0.91
GTF3C1-204ENST00000564664 IGLV2-23P01705 113 aa9.38□□□□□ -0.91
GTF3C1-204ENST00000564664 IGHV3-11P01762 117 aa9.38□□□□□ -0.91
GTF3C1-204ENST00000564664 CTXN2P0C2S0 81 aa9.38□□□□□ -0.91
GTF3C1-204ENST00000564664 GSTT2P0CG29 244 aa9.38□□□□□ -0.91
GTF3C1-204ENST00000564664 GSTT2BP0CG30 244 aa9.38□□□□□ -0.91
GTF3C1-204ENST00000564664 GP9P14770 177 aa9.38□□□□□ -0.91
GTF3C1-204ENST00000564664 RAB3BP20337 219 aa9.38□□□□□ -0.91
GTF3C1-204ENST00000564664 TEX45Q8NA69 505 aa9.38□□□□□ -0.91
GTF3C1-204ENST00000564664 USMG5Q96IX5 58 aa9.38□□□□□ -0.91
GTF3C1-204ENST00000564664 GINS4Q9BRT9 223 aa9.38□□□□□ -0.91
GTF3C1-204ENST00000564664 OR2D2Q9H210 308 aa9.38□□□□□ -0.91
GTF3C1-204ENST00000564664 ZNF355PQ9NSJ1 428 aa9.38□□□□□ -0.91
GTF3C1-204ENST00000564664 STUB1Q9UNE7 303 aa9.38□□□□□ -0.91
GTF3C1-204ENST00000564664 STAB2Q8WWQ8 2551 aa9.37□□□□□ -0.91
GTF3C1-204ENST00000564664 MFNGO00587 321 aa9.37□□□□□ -0.91
GTF3C1-204ENST00000564664 BET1O15155 118 aa9.37□□□□□ -0.91
GTF3C1-204ENST00000564664 SHOXO15266 292 aa9.37□□□□□ -0.91
GTF3C1-204ENST00000564664 SLC22A5O76082 557 aa9.37□□□□□ -0.91
GTF3C1-204ENST00000564664 SPNP16150 400 aa9.37□□□□□ -0.91
GTF3C1-204ENST00000564664 HIST1H1DP16402 221 aaKnown RBP9.37□□□□□ -0.91
GTF3C1-204ENST00000564664 GNB3P16520 340 aa9.37□□□□□ -0.91
GTF3C1-204ENST00000564664 DTYMKP23919 212 aa9.37□□□□□ -0.91
GTF3C1-204ENST00000564664 LINC00205P59089 165 aa9.37□□□□□ -0.91
GTF3C1-204ENST00000564664 TATDN3Q17R31 274 aa9.37□□□□□ -0.91
GTF3C1-204ENST00000564664 VMA21Q3ZAQ7 101 aa9.37□□□□□ -0.91
GTF3C1-204ENST00000564664 IGSF11Q5DX21 431 aa9.37□□□□□ -0.91
GTF3C1-204ENST00000564664 OR5T1Q8NG75 326 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms