RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	KLHDC7B	Q96G42	594 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	KLRC4-KLRK1	H3BQV0	150 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288		J3KRW8	73 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	GNG3	P63215	75 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	BHLHA9	Q7RTU4	235 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	MUC15	Q8N387	334 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	MPDZ	O75970	2070 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	PRAMEF5	Q5TYX0	476 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	PRAMEF6	Q5VXH4	476 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	RSPO3	Q9BXY4	272 aa	Predicted RBP	3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	MRPL16	Q9NX20	251 aa	Known RBP	3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	PSMB2	P49721	201 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	CCL23	P55773	120 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	NKX2-8	O15522	239 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	OR1L4	Q8NGR5	311 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	C18orf32	Q8TCD1	76 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	MTCH1	Q9NZJ7	389 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	TEPP	Q6URK8	271 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	TEX43	Q6ZNM6	134 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	KLRF1	Q9NZS2	232 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	DIDO1	Q9BTC0	2240 aa	Known RBP	3.68	□□□□□ -1.82
MACF1-231	ENST00000564288		A0A1W2PP11	408 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	TMEM189	A5PLL7	270 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	CAMP	P49913	170 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288		Q6ZS49	121 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	RELB	Q01201	579 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	MGAT2	Q10469	447 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	PAPPA-AS1	Q5QFB9	102 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	FAM90A1	Q86YD7	464 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	TFPI2	P48307	235 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	TBR1	Q16650	682 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	TCF24	Q7RTU0	167 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	WNT6	Q9Y6F9	365 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	CDK5RAP2	Q96SN8	1893 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	AZU1	P20160	251 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	KLK13	Q9UKR3	277 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	MSGN1	A6NI15	193 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	RUNX1	Q01196	453 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	PRSS47	A8MTI9	375 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	DHH	O43323	396 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	CTSO	P43234	321 aa	Predicted RBP	3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	CHD3	Q12873	2000 aa	Known RBP	3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	LINC01590	Q5TEZ4	76 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	CITED2	Q99967	270 aa	Predicted RBP	3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	NCBP2L	A6PVI3	153 aa	Known RBP	3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	ADCYAP1	P18509	176 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	SRSF1	Q07955	248 aa	Known RBP eCLIP	3.68	□□□□□ -1.82	3e-7	■■■■□ 22.3
MACF1-231	ENST00000564288	OR1K1	Q8NGR3	316 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	SLC25A40	Q8TBP6	338 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	TAAR3P	Q9P1P4	343 aa		3.68	□□□□□ -1.82
MACF1-231	ENST00000564288	KLF7	O75840	302 aa	Predicted RBP	3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	SERF1A	O75920	110 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	MRPL43	Q8N983	215 aa	Known RBP	3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	UBALD1	Q8TB05	177 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	RAB37	Q96AX2	223 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	ELOVL5	Q9NYP7	299 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	LILRA1	O75019	489 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	RHOG	P84095	191 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	RNFT1	Q5M7Z0	435 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288		P01737	135 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	FADS6	Q8N9I5	356 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	TMEM116	Q8NCL8	245 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	SERGEF	Q9UGK8	458 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	ZNF236	Q9UL36	1845 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	OR5P3	Q8WZ94	311 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	HIST1H4G	Q99525	98 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	CCDC168	Q8NDH2	2452 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	APOBEC3D	Q96AK3	386 aa	Predicted RBP	3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	IGHM	P01871	453 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	RBX1	P62877	108 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	POU3F1	Q03052	451 aa	Predicted RBP	3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	ATP5L2	Q7Z4Y8	100 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	PAAF1	Q9BRP4	392 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	MED12	Q93074	2177 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288		A0A1W2PS18	150 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	CA1	P00915	261 aa	Predicted RBP	3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	DEFB125	Q8N687	156 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	FAM173A	Q9BQD7	235 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	PRND	Q9UKY0	176 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	USP9Y	O00507	2555 aa	Predicted RBP	3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	MLNR	O43193	412 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	ARL16	Q0P5N6	197 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	CST6	Q15828	149 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	C22orf46	C9J442	243 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	GPR6	P46095	362 aa	Predicted RBP	3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	C9orf172	C9J069	976 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	C3orf80	F5H4A9	247 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	PSG5	Q15238	335 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	SPSB3	Q6PJ21	355 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	GAPT	Q8N292	157 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	WNT10A	Q9GZT5	417 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	hADV38S2	A0JD32	116 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	OPRK1	P41145	380 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	AAED1	Q7RTV5	226 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	TMEM256	Q8N2U0	113 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	GATAD1	Q8WUU5	269 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	MPC1	Q9Y5U8	109 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	TOMM40	O96008	361 aa		3.67	□□□□□ -1.82
MACF1-231	ENST00000564288	OR13C6P	Q8NH95	151 aa		3.67	□□□□□ -1.82

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms