RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.56■□□□□ 0.08
SHCBP1-203ENST00000564272 ABHD5Q8WTS1 349 aa15.56■□□□□ 0.08
SHCBP1-203ENST00000564272 SDHAF2Q9NX18 166 aa15.56■□□□□ 0.08
SHCBP1-203ENST00000564272 LOC100506127A0A0U1RQW1 187 aa15.55■□□□□ 0.08
SHCBP1-203ENST00000564272 SOX15O60248 233 aa15.55■□□□□ 0.08
SHCBP1-203ENST00000564272 DIRAS3O95661 229 aa15.55■□□□□ 0.08
SHCBP1-203ENST00000564272 CRIP2P52943 208 aaPredicted RBP15.55■□□□□ 0.08
SHCBP1-203ENST00000564272 RPS16P62249 146 aaKnown RBP15.55■□□□□ 0.08
SHCBP1-203ENST00000564272 KCTD21Q4G0X4 260 aa15.55■□□□□ 0.08
SHCBP1-203ENST00000564272 ZNF491Q8N8L2 437 aa15.55■□□□□ 0.08
SHCBP1-203ENST00000564272 OR5B12Q96R08 314 aa15.55■□□□□ 0.08
SHCBP1-203ENST00000564272 RNF5Q99942 180 aa15.55■□□□□ 0.08
SHCBP1-203ENST00000564272 GINS4Q9BRT9 223 aa15.55■□□□□ 0.08
SHCBP1-203ENST00000564272 FAM103A1Q9BTL3 118 aaKnown RBP15.55■□□□□ 0.08
SHCBP1-203ENST00000564272 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.55■□□□□ 0.08
SHCBP1-203ENST00000564272 TPSG1Q9NRR2 321 aa15.55■□□□□ 0.08
SHCBP1-203ENST00000564272 SLC35D1Q9NTN3 355 aa15.55■□□□□ 0.08
SHCBP1-203ENST00000564272 A0A1W2PN81 502 aa15.54■□□□□ 0.08
SHCBP1-203ENST00000564272 CA2P00918 260 aa15.54■□□□□ 0.08
SHCBP1-203ENST00000564272 EGR2P11161 476 aaPredicted RBP15.54■□□□□ 0.08
SHCBP1-203ENST00000564272 DTYMKP23919 212 aa15.54■□□□□ 0.08
SHCBP1-203ENST00000564272 CHRNA7P36544 502 aa15.54■□□□□ 0.08
SHCBP1-203ENST00000564272 FHL3Q13643 280 aa15.54■□□□□ 0.08
SHCBP1-203ENST00000564272 Q6ZS49 121 aa15.54■□□□□ 0.08
SHCBP1-203ENST00000564272 H1FOOQ8IZA3 346 aaPredicted RBP15.54■□□□□ 0.08
SHCBP1-203ENST00000564272 CASTOR1Q8WTX7 329 aa15.54■□□□□ 0.08
SHCBP1-203ENST00000564272 NUDCD2Q8WVJ2 157 aa15.54■□□□□ 0.08
SHCBP1-203ENST00000564272 UBE2E2Q96LR5 201 aa15.54■□□□□ 0.08
SHCBP1-203ENST00000564272 TSNAXQ99598 290 aaKnown RBP15.54■□□□□ 0.08
SHCBP1-203ENST00000564272 FOXA2Q9Y261 457 aaPredicted RBP15.54■□□□□ 0.08
SHCBP1-203ENST00000564272 VSIG4Q9Y279 399 aa15.54■□□□□ 0.08
SHCBP1-203ENST00000564272 TMEM235A6NFC5 223 aa15.53■□□□□ 0.08
SHCBP1-203ENST00000564272 SLC25A17O43808 307 aa15.53■□□□□ 0.08
SHCBP1-203ENST00000564272 SPDEFO95238 335 aa15.53■□□□□ 0.08
SHCBP1-203ENST00000564272 CD36P16671 472 aa15.53■□□□□ 0.08
SHCBP1-203ENST00000564272 RAB9AP51151 201 aa15.53■□□□□ 0.08
SHCBP1-203ENST00000564272 LUMP51884 338 aaPredicted RBP15.53■□□□□ 0.08
SHCBP1-203ENST00000564272 GNB1P62873 340 aa15.53■□□□□ 0.08
SHCBP1-203ENST00000564272 ARL6IP1Q15041 203 aa15.53■□□□□ 0.08
SHCBP1-203ENST00000564272 SRSF7Q16629 238 aaKnown RBP eCLIP15.53■□□□□ 0.08
SHCBP1-203ENST00000564272 HACD4Q5VWC8 232 aa15.53■□□□□ 0.08
SHCBP1-203ENST00000564272 OR11H1Q8NG94 326 aa15.53■□□□□ 0.08
SHCBP1-203ENST00000564272 OR5M8Q8NGP6 311 aa15.53■□□□□ 0.08
SHCBP1-203ENST00000564272 FLYWCH2Q96CP2 140 aaKnown RBP15.53■□□□□ 0.08
SHCBP1-203ENST00000564272 CENPOQ9BU64 300 aa15.53■□□□□ 0.08
SHCBP1-203ENST00000564272 ST6GALNAC5Q9BVH7 336 aa15.53■□□□□ 0.08
SHCBP1-203ENST00000564272 RBM7Q9Y580 266 aaKnown RBP15.53■□□□□ 0.08
SHCBP1-203ENST00000564272 I3L521 148 aa15.52■□□□□ 0.08
SHCBP1-203ENST00000564272 PPP1R27Q86WC6 154 aa15.52■□□□□ 0.08
SHCBP1-203ENST00000564272 OR5H6Q8NGV6 325 aa15.52■□□□□ 0.08
SHCBP1-203ENST00000564272 RHBDL2Q9NX52 303 aa15.52■□□□□ 0.08
SHCBP1-203ENST00000564272 NUBP2Q9Y5Y2 271 aa15.52■□□□□ 0.08
SHCBP1-203ENST00000564272 IGLV2-23P01705 113 aa15.51■□□□□ 0.07
SHCBP1-203ENST00000564272 ZNF260Q3ZCT1 412 aa15.51■□□□□ 0.07
SHCBP1-203ENST00000564272 IDNKQ5T6J7 187 aa15.51■□□□□ 0.07
SHCBP1-203ENST00000564272 ASPHD1Q5U4P2 390 aa15.51■□□□□ 0.07
SHCBP1-203ENST00000564272 UNQ5815/PRO19632Q6UWF5 114 aa15.51■□□□□ 0.07
SHCBP1-203ENST00000564272 ZNF562Q6V9R5 426 aa15.51■□□□□ 0.07
SHCBP1-203ENST00000564272 BVESQ8NE79 360 aa15.51■□□□□ 0.07
SHCBP1-203ENST00000564272 GRPEL2Q8TAA5 225 aa15.51■□□□□ 0.07
SHCBP1-203ENST00000564272 SLC25A38Q96DW6 304 aa15.51■□□□□ 0.07
SHCBP1-203ENST00000564272 ALX4Q9H161 411 aaPredicted RBP15.51■□□□□ 0.07
SHCBP1-203ENST00000564272 J3QRK9 145 aa15.5■□□□□ 0.07
SHCBP1-203ENST00000564272 ARPC1BO15143 372 aaKnown RBP15.5■□□□□ 0.07
SHCBP1-203ENST00000564272 SSX5O60225 188 aa15.5■□□□□ 0.07
SHCBP1-203ENST00000564272 SCGNO76038 276 aa15.5■□□□□ 0.07
SHCBP1-203ENST00000564272 GNG2P59768 71 aa15.5■□□□□ 0.07
SHCBP1-203ENST00000564272 RUNX1Q01196 453 aa15.5■□□□□ 0.07
SHCBP1-203ENST00000564272 ACTBL2Q562R1 376 aa15.5■□□□□ 0.07
SHCBP1-203ENST00000564272 TCTEX1D1Q8N7M0 179 aa15.5■□□□□ 0.07
SHCBP1-203ENST00000564272 LFNGQ8NES3 379 aa15.5■□□□□ 0.07
SHCBP1-203ENST00000564272 OR1N2Q8NGR9 330 aa15.5■□□□□ 0.07
SHCBP1-203ENST00000564272 ARPC1AQ92747 370 aa15.5■□□□□ 0.07
SHCBP1-203ENST00000564272 HARBI1Q96MB7 349 aa15.5■□□□□ 0.07
SHCBP1-203ENST00000564272 SEC14L6B5MCN3 397 aa15.49■□□□□ 0.07
SHCBP1-203ENST00000564272 TGFBR1P36897 503 aa15.49■□□□□ 0.07
SHCBP1-203ENST00000564272 SSBP2P81877 361 aaPredicted RBP15.49■□□□□ 0.07
SHCBP1-203ENST00000564272 ZNF616Q08AN1 781 aa15.49■□□□□ 0.07
SHCBP1-203ENST00000564272 TMEM267Q0VDI3 215 aaPredicted RBP15.49■□□□□ 0.07
SHCBP1-203ENST00000564272 PJVKQ0ZLH3 352 aa15.49■□□□□ 0.07
SHCBP1-203ENST00000564272 FXYD3Q14802 87 aa15.49■□□□□ 0.07
SHCBP1-203ENST00000564272 DEFB121Q5J5C9 76 aa15.49■□□□□ 0.07
SHCBP1-203ENST00000564272 DCSTAMPQ9H295 470 aa15.49■□□□□ 0.07
SHCBP1-203ENST00000564272 CRYGBP07316 175 aa15.48■□□□□ 0.07
SHCBP1-203ENST00000564272 OR8U8P0C7N1 319 aa15.48■□□□□ 0.07
SHCBP1-203ENST00000564272 NFYAP23511 347 aaPredicted RBP15.48■□□□□ 0.07
SHCBP1-203ENST00000564272 DUTP33316 252 aaKnown RBP15.48■□□□□ 0.07
SHCBP1-203ENST00000564272 DGCR2P98153 550 aa15.48■□□□□ 0.07
SHCBP1-203ENST00000564272 PITPNAQ00169 270 aa15.48■□□□□ 0.07
SHCBP1-203ENST00000564272 CBX3Q13185 183 aa15.48■□□□□ 0.07
SHCBP1-203ENST00000564272 RTL8BQ17RB0 113 aa15.48■□□□□ 0.07
SHCBP1-203ENST00000564272 AKIRIN2Q53H80 203 aa15.48■□□□□ 0.07
SHCBP1-203ENST00000564272 C9orf66Q5T8R8 295 aa15.48■□□□□ 0.07
SHCBP1-203ENST00000564272 DDB2Q92466 427 aa15.48■□□□□ 0.07
SHCBP1-203ENST00000564272 MS4A10Q96PG2 267 aa15.48■□□□□ 0.07
SHCBP1-203ENST00000564272 ETV7Q9Y603 341 aa15.48■□□□□ 0.07
SHCBP1-203ENST00000564272 SRRM4A7MD48 611 aaKnown RBP15.47■□□□□ 0.07
SHCBP1-203ENST00000564272 LINC00473A8K010 186 aa15.47■□□□□ 0.07
SHCBP1-203ENST00000564272 SHOXO15266 292 aa15.47■□□□□ 0.07
SHCBP1-203ENST00000564272 LGALS7P47929 136 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms