RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 RTN4IP1Q8WWV3 396 aaPredicted RBP13.73□□□□□ -0.21
CMTM3-208ENST00000564247 MALSU1Q96EH3 234 aa13.73□□□□□ -0.21
CMTM3-208ENST00000564247 ADTRPQ96IZ2 230 aa13.73□□□□□ -0.21
CMTM3-208ENST00000564247 IGHV3OR16-10A0A075B7F0 116 aa13.72□□□□□ -0.21
CMTM3-208ENST00000564247 A0A0A6YYJ9 748 aa13.72□□□□□ -0.21
CMTM3-208ENST00000564247 OOSP1A8MZH6 123 aa13.72□□□□□ -0.21
CMTM3-208ENST00000564247 MPPED1O15442 326 aa13.72□□□□□ -0.21
CMTM3-208ENST00000564247 FSHBP01225 129 aa13.72□□□□□ -0.21
CMTM3-208ENST00000564247 ANXA7P20073 488 aaKnown RBP13.72□□□□□ -0.21
CMTM3-208ENST00000564247 THBS3P49746 956 aa13.72□□□□□ -0.21
CMTM3-208ENST00000564247 RAB25P57735 213 aa13.72□□□□□ -0.21
CMTM3-208ENST00000564247 C4orf46Q504U0 113 aa13.72□□□□□ -0.21
CMTM3-208ENST00000564247 TPTE2P1Q5T6R2 138 aa13.72□□□□□ -0.21
CMTM3-208ENST00000564247 TBC1D26Q86UD7 250 aa13.72□□□□□ -0.21
CMTM3-208ENST00000564247 ST6GALNAC6Q969X2 333 aa13.72□□□□□ -0.21
CMTM3-208ENST00000564247 PRELID3BQ9Y3B1 194 aa13.72□□□□□ -0.21
CMTM3-208ENST00000564247 STAB1Q9NY15 2570 aa13.72□□□□□ -0.21
CMTM3-208ENST00000564247 LY6LH3BQJ8 138 aa13.71□□□□□ -0.21
CMTM3-208ENST00000564247 PRAF2O60831 178 aa13.71□□□□□ -0.21
CMTM3-208ENST00000564247 OR4E1P0C645 316 aa13.71□□□□□ -0.21
CMTM3-208ENST00000564247 IGHV4-38-2P0DP08 117 aa13.71□□□□□ -0.21
CMTM3-208ENST00000564247 ANXA3P12429 323 aa13.71□□□□□ -0.21
CMTM3-208ENST00000564247 DUTP33316 252 aaKnown RBP13.71□□□□□ -0.21
CMTM3-208ENST00000564247 SAA4P35542 130 aa13.71□□□□□ -0.21
CMTM3-208ENST00000564247 ARHGDIBP52566 201 aa13.71□□□□□ -0.21
CMTM3-208ENST00000564247 SRSF2Q01130 221 aaKnown RBP13.71□□□□□ -0.21
CMTM3-208ENST00000564247 TAGLNQ01995 201 aaKnown RBP13.71□□□□□ -0.21
CMTM3-208ENST00000564247 CCDC144NLQ6NUI1 221 aa13.71□□□□□ -0.21
CMTM3-208ENST00000564247 KCTD9Q7L273 389 aa13.71□□□□□ -0.21
CMTM3-208ENST00000564247 TCTEX1D2Q8WW35 142 aa13.71□□□□□ -0.21
CMTM3-208ENST00000564247 ZNF251Q9BRH9 671 aa13.71□□□□□ -0.21
CMTM3-208ENST00000564247 BEX1Q9HBH7 125 aa13.71□□□□□ -0.21
CMTM3-208ENST00000564247 GPN1Q9HCN4 374 aaPredicted RBP13.71□□□□□ -0.21
CMTM3-208ENST00000564247 NUP50Q9UKX7 468 aa13.71□□□□□ -0.21
CMTM3-208ENST00000564247 FAM96BQ9Y3D0 163 aa13.71□□□□□ -0.21
CMTM3-208ENST00000564247 HILPDAQ9Y5L2 63 aa13.71□□□□□ -0.21
CMTM3-208ENST00000564247 CRYM-AS1A6NIL9 109 aa13.7□□□□□ -0.22
CMTM3-208ENST00000564247 PROP1O75360 226 aa13.7□□□□□ -0.22
CMTM3-208ENST00000564247 B3GALNT1O75752 331 aa13.7□□□□□ -0.22
CMTM3-208ENST00000564247 IL5P05113 134 aa13.7□□□□□ -0.22
CMTM3-208ENST00000564247 F2RP25116 425 aa13.7□□□□□ -0.22
CMTM3-208ENST00000564247 REG1BP48304 166 aa13.7□□□□□ -0.22
CMTM3-208ENST00000564247 MECP2P51608 486 aaKnown RBP13.7□□□□□ -0.22
CMTM3-208ENST00000564247 DHODHQ02127 395 aa13.7□□□□□ -0.22
CMTM3-208ENST00000564247 ZNF816Q0VGE8 651 aaPredicted RBP13.7□□□□□ -0.22
CMTM3-208ENST00000564247 SSX2Q16385 188 aa13.7□□□□□ -0.22
CMTM3-208ENST00000564247 KLF17Q5JT82 389 aaPredicted RBP13.7□□□□□ -0.22
CMTM3-208ENST00000564247 BRD3OSQ6XYD6 125 aa13.7□□□□□ -0.22
CMTM3-208ENST00000564247 LHFPL4Q7Z7J7 247 aa13.7□□□□□ -0.22
CMTM3-208ENST00000564247 MOB3BQ86TA1 216 aa13.7□□□□□ -0.22
CMTM3-208ENST00000564247 TCTEX1D1Q8N7M0 179 aa13.7□□□□□ -0.22
CMTM3-208ENST00000564247 ZNF418Q8TF45 676 aaPredicted RBP13.7□□□□□ -0.22
CMTM3-208ENST00000564247 MS4A7Q9GZW8 240 aaPredicted RBP13.7□□□□□ -0.22
CMTM3-208ENST00000564247 NAA60Q9H7X0 242 aa13.7□□□□□ -0.22
CMTM3-208ENST00000564247 LIN7CQ9NUP9 197 aaKnown RBP13.7□□□□□ -0.22
CMTM3-208ENST00000564247 C3orf85A0A1B0GTC6 90 aa13.69□□□□□ -0.22
CMTM3-208ENST00000564247 APOA2P02652 100 aa13.69□□□□□ -0.22
CMTM3-208ENST00000564247 CT45A6P0DMU7 189 aa13.69□□□□□ -0.22
CMTM3-208ENST00000564247 CT45A5P0DMU8 189 aa13.69□□□□□ -0.22
CMTM3-208ENST00000564247 CT45A7P0DMV0 189 aa13.69□□□□□ -0.22
CMTM3-208ENST00000564247 VAMP1P23763 118 aa13.69□□□□□ -0.22
CMTM3-208ENST00000564247 MC5RP33032 325 aa13.69□□□□□ -0.22
CMTM3-208ENST00000564247 KIR2DS2P43631 304 aa13.69□□□□□ -0.22
CMTM3-208ENST00000564247 CBX3Q13185 183 aa13.69□□□□□ -0.22
CMTM3-208ENST00000564247 DIAPH2-AS1Q14236 149 aa13.69□□□□□ -0.22
CMTM3-208ENST00000564247 RUSC1-AS1Q66K80 236 aa13.69□□□□□ -0.22
CMTM3-208ENST00000564247 OR8H3Q8N146 312 aa13.69□□□□□ -0.22
CMTM3-208ENST00000564247 PIP4P2Q8N4L2 257 aa13.69□□□□□ -0.22
CMTM3-208ENST00000564247 DRAXINQ8NBI3 349 aaPredicted RBP13.69□□□□□ -0.22
CMTM3-208ENST00000564247 OR51H1Q8NH63 302 aa13.69□□□□□ -0.22
CMTM3-208ENST00000564247 CD300LFQ8TDQ1 290 aa13.69□□□□□ -0.22
CMTM3-208ENST00000564247 TMEM230Q96A57 120 aa13.69□□□□□ -0.22
CMTM3-208ENST00000564247 C5orf30Q96GV9 206 aa13.69□□□□□ -0.22
CMTM3-208ENST00000564247 GPHA2Q96T91 129 aa13.69□□□□□ -0.22
CMTM3-208ENST00000564247 C19orf24Q9BVV8 132 aa13.69□□□□□ -0.22
CMTM3-208ENST00000564247 IGHV1-3A0A0C4DH29 117 aa13.68□□□□□ -0.22
CMTM3-208ENST00000564247 VSIG10L2P0DP72 767 aa13.68□□□□□ -0.22
CMTM3-208ENST00000564247 RRASP10301 218 aa13.68□□□□□ -0.22
CMTM3-208ENST00000564247 RPL30P62888 115 aaKnown RBP13.68□□□□□ -0.22
CMTM3-208ENST00000564247 PPP1R1AQ13522 171 aa13.68□□□□□ -0.22
CMTM3-208ENST00000564247 EIF4EBP1Q13541 118 aaPredicted RBP13.68□□□□□ -0.22
CMTM3-208ENST00000564247 GLDNQ6ZMI3 551 aaPredicted RBP13.68□□□□□ -0.22
CMTM3-208ENST00000564247 LYG2Q86SG7 212 aa13.68□□□□□ -0.22
CMTM3-208ENST00000564247 CAPSLQ8WWF8 208 aa13.68□□□□□ -0.22
CMTM3-208ENST00000564247 NABP2Q9BQ15 211 aa13.68□□□□□ -0.22
CMTM3-208ENST00000564247 MRPL20Q9BYC9 149 aaKnown RBP13.68□□□□□ -0.22
CMTM3-208ENST00000564247 C9orf170A2RU37 121 aa13.67□□□□□ -0.22
CMTM3-208ENST00000564247 LINC00473A8K010 186 aa13.67□□□□□ -0.22
CMTM3-208ENST00000564247 VENTXO95231 258 aa13.67□□□□□ -0.22
CMTM3-208ENST00000564247 SFT2D2O95562 160 aa13.67□□□□□ -0.22
CMTM3-208ENST00000564247 HLA-AP01891 365 aaKnown RBP13.67□□□□□ -0.22
CMTM3-208ENST00000564247 SERPINE2P07093 398 aa13.67□□□□□ -0.22
CMTM3-208ENST00000564247 BRS3P32247 399 aa13.67□□□□□ -0.22
CMTM3-208ENST00000564247 HILS1P60008 231 aa13.67□□□□□ -0.22
CMTM3-208ENST00000564247 RTL8BQ17RB0 113 aa13.67□□□□□ -0.22
CMTM3-208ENST00000564247 LDLRAD2Q5SZI1 272 aa13.67□□□□□ -0.22
CMTM3-208ENST00000564247 SPAG16Q8N0X2 631 aa13.67□□□□□ -0.22
CMTM3-208ENST00000564247 GALNT14Q96FL9 552 aa13.67□□□□□ -0.22
CMTM3-208ENST00000564247 PIGBOS1A0A0B4J2F0 54 aa13.66□□□□□ -0.22
CMTM3-208ENST00000564247 H0Y980 276 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms