RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 ATG101Q9BSB4 218 aa8.89□□□□□ -0.99
RNF40-204ENST00000563683 U3KQA8 63 aa8.89□□□□□ -0.99
RNF40-204ENST00000563683 IGKV1D-13A0A0B4J2D9 117 aa8.88□□□□□ -0.99
RNF40-204ENST00000563683 MDFIC2A0A1B0GVS7 189 aa8.88□□□□□ -0.99
RNF40-204ENST00000563683 IGKV1-13P0DP09 117 aa8.88□□□□□ -0.99
RNF40-204ENST00000563683 LHX2P50458 406 aa8.88□□□□□ -0.99
RNF40-204ENST00000563683 PAX5Q02548 391 aa8.88□□□□□ -0.99
RNF40-204ENST00000563683 FOXC1Q12948 553 aa8.88□□□□□ -0.99
RNF40-204ENST00000563683 SP5Q6BEB4 398 aaPredicted RBP8.88□□□□□ -0.99
RNF40-204ENST00000563683 OR10G9Q8NGN4 311 aa8.88□□□□□ -0.99
RNF40-204ENST00000563683 OR10G7Q8NGN6 311 aa8.88□□□□□ -0.99
RNF40-204ENST00000563683 TMEM171Q8WVE6 324 aa8.88□□□□□ -0.99
RNF40-204ENST00000563683 LIME1Q9H400 295 aa8.88□□□□□ -0.99
RNF40-204ENST00000563683 RFNGQ9Y644 331 aa8.88□□□□□ -0.99
RNF40-204ENST00000563683 DUXBA0A1W2PPF3 345 aa8.88□□□□□ -0.99
RNF40-204ENST00000563683 H0Y980 276 aa8.88□□□□□ -0.99
RNF40-204ENST00000563683 FAM3BP58499 235 aaPredicted RBP8.88□□□□□ -0.99
RNF40-204ENST00000563683 TMEM41BQ5BJD5 291 aa8.88□□□□□ -0.99
RNF40-204ENST00000563683 DTD1Q8TEA8 209 aa8.88□□□□□ -0.99
RNF40-204ENST00000563683 C11orf1Q9H5F2 150 aa8.88□□□□□ -0.99
RNF40-204ENST00000563683 NAT8Q9UHE5 227 aa8.88□□□□□ -0.99
RNF40-204ENST00000563683 RPH3ALQ9UNE2 315 aa8.88□□□□□ -0.99
RNF40-204ENST00000563683 CPAMD8Q8IZJ3 1885 aa8.88□□□□□ -0.99
RNF40-204ENST00000563683 WNK2Q9Y3S1 2297 aa8.88□□□□□ -0.99
RNF40-204ENST00000563683 WNT9BO14905 357 aa8.88□□□□□ -0.99
RNF40-204ENST00000563683 CELA3BP08861 270 aa8.88□□□□□ -0.99
RNF40-204ENST00000563683 ABLIM2Q6H8Q1 611 aa8.88□□□□□ -0.99
RNF40-204ENST00000563683 INO80CQ6PI98 192 aaPredicted RBP8.88□□□□□ -0.99
RNF40-204ENST00000563683 MOGAT3Q86VF5 341 aa8.88□□□□□ -0.99
RNF40-204ENST00000563683 FGFRL1Q8N441 504 aa8.88□□□□□ -0.99
RNF40-204ENST00000563683 SNHG12Q9BXW3 62 aa8.88□□□□□ -0.99
RNF40-204ENST00000563683 ZNF665Q9H7R5 613 aa8.88□□□□□ -0.99
RNF40-204ENST00000563683 GOLT1BQ9Y3E0 138 aa8.88□□□□□ -0.99
RNF40-204ENST00000563683 FAM90A10PA6NDY2 464 aa8.87□□□□□ -0.99
RNF40-204ENST00000563683 FAM90A18PA6NE21 464 aa8.87□□□□□ -0.99
RNF40-204ENST00000563683 FAM90A16PA6NEW6 464 aa8.87□□□□□ -0.99
RNF40-204ENST00000563683 OOEPA6NGQ2 149 aa8.87□□□□□ -0.99
RNF40-204ENST00000563683 FAM90A20PA6NIJ5 464 aa8.87□□□□□ -0.99
RNF40-204ENST00000563683 FAM90A8PA6NJQ4 464 aa8.87□□□□□ -0.99
RNF40-204ENST00000563683 FAM90A7PA6NKC0 464 aa8.87□□□□□ -0.99
RNF40-204ENST00000563683 LRRC30A6NM36 301 aa8.87□□□□□ -0.99
RNF40-204ENST00000563683 MARCH11A6NNE9 402 aa8.87□□□□□ -0.99
RNF40-204ENST00000563683 FAM90A22PA8MWA6 464 aa8.87□□□□□ -0.99
RNF40-204ENST00000563683 FAM90A12PA8MX19 464 aa8.87□□□□□ -0.99
RNF40-204ENST00000563683 FAM90A5PA8MXJ8 464 aa8.87□□□□□ -0.99
RNF40-204ENST00000563683 FAM90A23PA8MXZ1 464 aa8.87□□□□□ -0.99
RNF40-204ENST00000563683 FAM90A15PP0C7V4 464 aa8.87□□□□□ -0.99
RNF40-204ENST00000563683 FAM90A13PP0C7W8 464 aa8.87□□□□□ -0.99
RNF40-204ENST00000563683 FAM90A14PP0C7W9 464 aa8.87□□□□□ -0.99
RNF40-204ENST00000563683 FAM90A24PP0C7X0 464 aa8.87□□□□□ -0.99
RNF40-204ENST00000563683 CLDN18P56856 261 aa8.87□□□□□ -0.99
RNF40-204ENST00000563683 MRPL52Q86TS9 123 aaKnown RBP8.87□□□□□ -0.99
RNF40-204ENST00000563683 OR5P3Q8WZ94 311 aa8.87□□□□□ -0.99
RNF40-204ENST00000563683 PATZ1Q9HBE1 687 aaKnown RBP8.87□□□□□ -0.99
RNF40-204ENST00000563683 CDH23Q9H251 3354 aa8.87□□□□□ -0.99
RNF40-204ENST00000563683 HBZP02008 142 aa8.87□□□□□ -0.99
RNF40-204ENST00000563683 PMS2P11Q13670 270 aa8.87□□□□□ -0.99
RNF40-204ENST00000563683 KLF14Q8TD94 323 aaPredicted RBP8.87□□□□□ -0.99
RNF40-204ENST00000563683 UHRF2Q96PU4 802 aa8.87□□□□□ -0.99
RNF40-204ENST00000563683 DOCK11Q5JSL3 2073 aa8.87□□□□□ -0.99
RNF40-204ENST00000563683 TRGV10A0A0A0MS01 117 aa8.87□□□□□ -0.99
RNF40-204ENST00000563683 MDKP21741 143 aaPredicted RBP8.87□□□□□ -0.99
RNF40-204ENST00000563683 MRGPRGQ86SM5 289 aa8.87□□□□□ -0.99
RNF40-204ENST00000563683 FDCSPQ8NFU4 85 aa8.87□□□□□ -0.99
RNF40-204ENST00000563683 TMEM37Q8WXS4 190 aa8.87□□□□□ -0.99
RNF40-204ENST00000563683 LINC00470Q9BZP3 86 aa8.87□□□□□ -0.99
RNF40-204ENST00000563683 OPN3Q9H1Y3 402 aaPredicted RBP8.87□□□□□ -0.99
RNF40-204ENST00000563683 GLRX2Q9NS18 164 aa8.87□□□□□ -0.99
RNF40-204ENST00000563683 AURKAIP1Q9NWT8 199 aaPredicted RBP8.87□□□□□ -0.99
RNF40-204ENST00000563683 OR7C2O60412 319 aa8.86□□□□□ -0.99
RNF40-204ENST00000563683 SCGB1D1O95968 90 aa8.86□□□□□ -0.99
RNF40-204ENST00000563683 ANOS1P23352 680 aa8.86□□□□□ -0.99
RNF40-204ENST00000563683 OTX1P32242 354 aaPredicted RBP8.86□□□□□ -0.99
RNF40-204ENST00000563683 PDLIM4P50479 330 aa8.86□□□□□ -0.99
RNF40-204ENST00000563683 KLF3P57682 345 aaPredicted RBP8.86□□□□□ -0.99
RNF40-204ENST00000563683 TMEM241Q24JQ0 296 aa8.86□□□□□ -0.99
RNF40-204ENST00000563683 TMEM170AQ8WVE7 144 aa8.86□□□□□ -0.99
RNF40-204ENST00000563683 TMEM56Q96MV1 263 aa8.86□□□□□ -0.99
RNF40-204ENST00000563683 PYGO2Q9BRQ0 406 aa8.86□□□□□ -0.99
RNF40-204ENST00000563683 TMEM56-RWDD3S4R434 201 aa8.86□□□□□ -0.99
RNF40-204ENST00000563683 MGST1P10620 155 aaKnown RBP8.86□□□□□ -0.99
RNF40-204ENST00000563683 GALR1P47211 349 aa8.86□□□□□ -0.99
RNF40-204ENST00000563683 RSPO1Q2MKA7 263 aaPredicted RBP8.86□□□□□ -0.99
RNF40-204ENST00000563683 CYB5R2Q6BCY4 276 aa8.86□□□□□ -0.99
RNF40-204ENST00000563683 TMEM45BQ96B21 275 aa8.86□□□□□ -0.99
RNF40-204ENST00000563683 POM121L2Q96KW2 1035 aa8.86□□□□□ -0.99
RNF40-204ENST00000563683 NGBQ9NPG2 151 aa8.86□□□□□ -0.99
RNF40-204ENST00000563683 RPLP1P05386 114 aaKnown RBP8.86□□□□□ -0.99
RNF40-204ENST00000563683 NTF4P34130 210 aa8.86□□□□□ -0.99
RNF40-204ENST00000563683 CHRNA7P36544 502 aa8.86□□□□□ -0.99
RNF40-204ENST00000563683 TDGF1P3P51864 188 aa8.86□□□□□ -0.99
RNF40-204ENST00000563683 MYPOPQ86VE0 399 aaPredicted RBP8.86□□□□□ -0.99
RNF40-204ENST00000563683 OR5D13Q8NGL4 314 aa8.86□□□□□ -0.99
RNF40-204ENST00000563683 C22orf15Q8WYQ4 148 aa8.86□□□□□ -0.99
RNF40-204ENST00000563683 OR51I2Q9H344 312 aa8.86□□□□□ -0.99
RNF40-204ENST00000563683 PROK2Q9HC23 129 aa8.86□□□□□ -0.99
RNF40-204ENST00000563683 ZNF71Q9NQZ8 489 aaPredicted RBP8.86□□□□□ -0.99
RNF40-204ENST00000563683 TMEM131Q92545 1883 aa8.86□□□□□ -0.99
RNF40-204ENST00000563683 PRR14LQ5THK1 2151 aa8.86□□□□□ -0.99
RNF40-204ENST00000563683 NKX6-3A6NJ46 265 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms