RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 A0A0B4J2A0 478 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 OR11H12B2RN74 326 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 UPK1AO00322 258 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 OR2T1O43869 369 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 UPK1BO75841 260 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 DHRS3O75911 302 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 S1PR2O95136 353 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 MOSP00540 346 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 PTHP01270 115 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 STATHP02808 62 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 HMGN2P05204 90 aaKnown RBP4□□□□□ -1.77
VPS35P1-201ENST00000563400 GIPP09681 153 aaPredicted RBP4□□□□□ -1.77
VPS35P1-201ENST00000563400 ZNF708P17019 499 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 MYL9P24844 172 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 F2RP25116 425 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 CHRNB4P30926 498 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 FMO3P31513 532 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 GUCA1AP43080 201 aaPredicted RBP4□□□□□ -1.77
VPS35P1-201ENST00000563400 DSCR4P56555 118 aaPredicted RBP4□□□□□ -1.77
VPS35P1-201ENST00000563400 GNG3P63215 75 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 EBPQ15125 230 aaKnown RBP4□□□□□ -1.77
VPS35P1-201ENST00000563400 TOMM34Q15785 309 aaPredicted RBP4□□□□□ -1.77
VPS35P1-201ENST00000563400 CLEC12BQ2HXU8 276 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 ZNF718Q3SXZ3 478 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 CDNFQ49AH0 187 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 CCDC58Q4VC31 144 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 TRMT12Q53H54 448 aaKnown RBP4□□□□□ -1.77
VPS35P1-201ENST00000563400 C1orf100Q5SVJ3 147 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 C1orf146Q5VVC0 180 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 C19orf48Q6RUI8 117 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 LINC00471Q8N535 108 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 ZNF615Q8N8J6 731 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 APCDD1LQ8NCL9 501 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 NUP37Q8NFH4 326 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 OR11H1Q8NG94 326 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 OR10G9Q8NGN4 311 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 OR11H2Q8NH07 326 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 RGP1Q92546 391 aaPredicted RBP4□□□□□ -1.77
VPS35P1-201ENST00000563400 TSLPQ969D9 159 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 MARC2Q969Z3 335 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 SPACA5Q96QH8 159 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 OR52B2Q96RD2 323 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 TBX5Q99593 518 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 PITX2Q99697 317 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 ABCG5Q9H222 651 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 DCSTAMPQ9H295 470 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 PARLQ9H300 379 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 EDA2RQ9HAV5 297 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 SLCO1B3Q9NPD5 702 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 RBFOX1Q9NWB1 397 aaKnown RBP4□□□□□ -1.77
VPS35P1-201ENST00000563400 SHPKQ9UHJ6 478 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 DKKL1Q9UK85 242 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 COX11Q9Y6N1 276 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 TMEM56-RWDD3S4R434 201 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 PTPRBP23467 1997 aa3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 IGHV1OR15-1A0A075B7D0 117 aa3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 A0A1B0GXF2 115 aa3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 A0A1W2PNU3 283 aaPredicted RBP3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 H0Y9J4 135 aa3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 MRASO14807 208 aa3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 GYG2O15488 501 aa3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 EIF1BO60739 113 aaKnown RBP3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 NOS1APO75052 506 aaPredicted RBP3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 PPBPP02775 128 aa3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 MMP7P09237 267 aaPredicted RBP3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 GKN3PP0CG01 181 aa3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 GPX2P18283 190 aa3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 CXCL2P19875 107 aa3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 S100A1P23297 94 aa3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 CTRLP40313 264 aa3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 LGALS7P47929 136 aa3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 P2RX1P51575 399 aa3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 HBG1P69891 147 aa3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 HBG2P69892 147 aa3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 HBA1P69905 142 aa3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 PRR3P79522 188 aaKnown RBP3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 RUNX1Q01196 453 aa3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 TMEM255AQ5JRV8 349 aa3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 TEX30Q5JUR7 227 aa3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 LAMTOR1Q6IAA8 161 aa3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 FAM53AQ6NSI3 398 aaPredicted RBP3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 RPS27LQ71UM5 84 aaKnown RBP3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 OAFQ86UD1 273 aa3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 ZCCHC24Q8N2G6 241 aaKnown RBP3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 FAM71E2Q8N5Q1 922 aa3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 ZNF614Q8N883 585 aa3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 ZNF485Q8NCK3 441 aa3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 TMBIM1Q969X1 311 aa3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 TAMM41Q96BW9 452 aa3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 LRRC58Q96CX6 371 aa3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 CMSS1Q9BQ75 279 aaKnown RBP3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 RTBDNQ9BSG5 229 aaPredicted RBP3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 GABARAPL3Q9BY60 117 aa3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 MIXL1Q9H2W2 232 aa3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 SLC7A10Q9NS82 523 aa3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 MCTS1Q9ULC4 181 aaKnown RBP3.99□□□□□ -1.77
VPS35P1-201ENST00000563400 AHCTF1Q8WYP5 2266 aa3.98□□□□□ -1.77
VPS35P1-201ENST00000563400 ZNF292O60281 2723 aa3.98□□□□□ -1.77
VPS35P1-201ENST00000563400 DYSFO75923 2080 aa3.98□□□□□ -1.77
VPS35P1-201ENST00000563400 MDC1Q14676 2089 aaKnown RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms