RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 MED18Q9BUE0 208 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 GTSF1LQ9H1H1 148 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 MAP1LC3AQ9H492 121 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 ZNF286AQ9HBT8 521 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 ASF1BQ9NVP2 202 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 LINC00527Q9UJ94 153 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 DNAJC12Q9UKB3 198 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 GUCA1BQ9UMX6 200 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 WASHC3Q9Y3C0 194 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 ZNF638Q14966 1978 aaKnown RBP1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 CRB1P82279 1406 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 CNTLNQ9NXG0 1405 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 PVALEFA0A1B0GWK0 134 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 BHLHE40O14503 412 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 TGOLN2O43493 480 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 LTAP01374 205 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 TCRBP04435 133 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 ATP5G1P05496 136 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 OR12D1P0DN82 309 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 IDH3GP51553 393 aaPredicted RBP1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 GNG2P59768 71 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 C1QTNF8P60827 252 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 ERVS71-1P61550 626 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 PSPHP78330 225 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 TFAMQ00059 246 aaKnown RBP1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 TMEM267Q0VDI3 215 aaPredicted RBP1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 POU6F1Q14863 301 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 KRTAP25-1Q3LHN0 102 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 ACSM3Q53FZ2 586 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 PYDC2Q56P42 97 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 PRR9Q5T870 116 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 RPL13AP3Q6NVV1 102 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 SCGB1D4Q6XE38 83 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 RASSF6Q6ZTQ3 369 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 S100A7AQ86SG5 101 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 CPNE9Q8IYJ1 553 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 OR51D1Q8NGF3 324 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 OR10D3Q8NH80 312 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 ASB13Q8WXK3 278 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 HIST1H2BAQ96A08 127 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 PTH2Q96A98 100 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 TESCQ96BS2 214 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 C12orf43Q96C57 262 aaKnown RBP1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 CMBLQ96DG6 245 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 IGF2BP2-AS1Q96M15 143 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 TRIB3Q96RU7 358 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 C12orf57Q99622 126 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 B9D2Q9BPU9 175 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 TCEAL7Q9BRU2 100 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 RTBDNQ9BSG5 229 aaPredicted RBP1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 DDA1Q9BW61 102 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 YIPF3Q9GZM5 350 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 TMEM138Q9NPI0 162 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 SPANXB1Q9NS25 103 aaPredicted RBP1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 CARHSP1Q9Y2V2 147 aaKnown RBP1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 ZNF337Q9Y3M9 751 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 R4GN34 69 aa1.75□□□□□ -2.13
SHCBP1-202ENST00000563219 COL1A2P08123 1366 aa1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 NID2Q14112 1375 aa1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 CCDC180Q9P1Z9 1646 aa1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 PRR14LQ5THK1 2151 aa1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 RFPL4AA6NLU0 287 aa1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 EVPLLA8MZ36 301 aa1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 DISC1C4P0D8 188 aa1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 RFPL4AL1F8VTS6 287 aa1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 CXCR6O00574 342 aa1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 TXNDC9O14530 226 aa1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 FADS1O60427 444 aa1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 SH2D1AO60880 128 aa1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 SULT1C4O75897 302 aa1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 CD5P06127 495 aa1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 RBP1P09455 135 aa1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 OR4A8P0C604 315 aa1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 SCGB1A1P11684 91 aa1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 ZNF708P17019 499 aa1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 OGNP20774 298 aaKnown RBP1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 RPL12P30050 165 aaKnown RBP1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 RPL5P46777 297 aaKnown RBP1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 REG1BP48304 166 aa1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 TCL1AP56279 114 aa1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 H2BFSP57053 126 aa1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 DAD1P61803 113 aa1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 LSM6P62312 80 aaKnown RBP1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 HERVK_113P63121 156 aa1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 SLC35A2P78381 396 aa1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 BTN3A2P78410 334 aa1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 BIKQ13323 160 aa1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 RSU1Q15404 277 aa1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 ZNF141Q15928 474 aa1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 ARHGAP11BQ3KRB8 267 aa1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 TMEM176BQ3YBM2 270 aaPredicted RBP1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 DEFB134Q4QY38 66 aa1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 NOXRED1Q6NXP6 359 aa1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 FAM19A5Q7Z5A7 132 aaPredicted RBP1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 PHF13Q86YI8 300 aaPredicted RBP1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 EIF4E3Q8N5X7 224 aaKnown RBP1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 PACRGLQ8N7B6 248 aa1.74□□□□□ -2.13
SHCBP1-202ENST00000563219 LMX1AQ8TE12 382 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms