RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 MSMO1Q15800 293 aa12.47□□□□□ -0.41
USB1-208ENST00000563207 CNPY1Q3B7I2 92 aa12.47□□□□□ -0.41
USB1-208ENST00000563207 VAX1Q5SQQ9 334 aa12.47□□□□□ -0.41
USB1-208ENST00000563207 SAMD5Q5TGI4 173 aa12.47□□□□□ -0.41
USB1-208ENST00000563207 DRAM1Q8N682 238 aa12.47□□□□□ -0.41
USB1-208ENST00000563207 TMEM229BQ8NBD8 167 aa12.47□□□□□ -0.41
USB1-208ENST00000563207 OR56B4Q8NH76 319 aa12.47□□□□□ -0.41
USB1-208ENST00000563207 BORCS5Q969J3 196 aa12.47□□□□□ -0.41
USB1-208ENST00000563207 AKR1E2Q96JD6 320 aa12.47□□□□□ -0.41
USB1-208ENST00000563207 CITED2Q99967 270 aaPredicted RBP12.47□□□□□ -0.41
USB1-208ENST00000563207 OR2D2Q9H210 308 aa12.47□□□□□ -0.41
USB1-208ENST00000563207 RNF150Q9ULK6 438 aa12.47□□□□□ -0.41
USB1-208ENST00000563207 OR5H14A6NHG9 310 aa12.46□□□□□ -0.41
USB1-208ENST00000563207 SH2D7A6NKC9 451 aaPredicted RBP12.46□□□□□ -0.41
USB1-208ENST00000563207 PPYP01298 95 aa12.46□□□□□ -0.41
USB1-208ENST00000563207 PMP2P02689 132 aa12.46□□□□□ -0.41
USB1-208ENST00000563207 FCER2P06734 321 aa12.46□□□□□ -0.41
USB1-208ENST00000563207 MC5RP33032 325 aa12.46□□□□□ -0.41
USB1-208ENST00000563207 RFX2P48378 723 aa12.46□□□□□ -0.41
USB1-208ENST00000563207 OXLD1Q5BKU9 147 aa12.46□□□□□ -0.41
USB1-208ENST00000563207 ZNF645Q8N7E2 425 aa12.46□□□□□ -0.41
USB1-208ENST00000563207 OR6F1Q8NGZ6 308 aa12.46□□□□□ -0.41
USB1-208ENST00000563207 OR2T10Q8NGZ9 312 aa12.46□□□□□ -0.41
USB1-208ENST00000563207 CAPSLQ8WWF8 208 aa12.46□□□□□ -0.41
USB1-208ENST00000563207 NABP2Q9BQ15 211 aa12.46□□□□□ -0.41
USB1-208ENST00000563207 V9GYH0 126 aa12.46□□□□□ -0.41
USB1-208ENST00000563207 M0QZK8 103 aa12.45□□□□□ -0.42
USB1-208ENST00000563207 FBXO24O75426 580 aa12.45□□□□□ -0.42
USB1-208ENST00000563207 IFNA6P05013 189 aa12.45□□□□□ -0.42
USB1-208ENST00000563207 SNRNP70P08621 437 aaKnown RBP12.45□□□□□ -0.42
USB1-208ENST00000563207 AADACP22760 399 aa12.45□□□□□ -0.42
USB1-208ENST00000563207 TSPAN5P62079 268 aa12.45□□□□□ -0.42
USB1-208ENST00000563207 LSAMPQ13449 338 aa12.45□□□□□ -0.42
USB1-208ENST00000563207 PYDC2Q56P42 97 aa12.45□□□□□ -0.42
USB1-208ENST00000563207 RPL39P5Q59GN2 51 aa12.45□□□□□ -0.42
USB1-208ENST00000563207 RNASE10Q5GAN6 216 aaKnown RBP12.45□□□□□ -0.42
USB1-208ENST00000563207 ZNF660Q6AZW8 331 aaPredicted RBP12.45□□□□□ -0.42
USB1-208ENST00000563207 TMEM17Q86X19 198 aa12.45□□□□□ -0.42
USB1-208ENST00000563207 ARRDC1Q8N5I2 433 aa12.45□□□□□ -0.42
USB1-208ENST00000563207 ZBTB34Q8NCN2 500 aa12.45□□□□□ -0.42
USB1-208ENST00000563207 OR8H1Q8NGG4 311 aa12.45□□□□□ -0.42
USB1-208ENST00000563207 ADTRPQ96IZ2 230 aa12.45□□□□□ -0.42
USB1-208ENST00000563207 RBM14Q96PK6 669 aaKnown RBP12.45□□□□□ -0.42
USB1-208ENST00000563207 WNT10AQ9GZT5 417 aa12.45□□□□□ -0.42
USB1-208ENST00000563207 SDHAF2Q9NX18 166 aa12.45□□□□□ -0.42
USB1-208ENST00000563207 PTTG2Q9NZH5 202 aa12.45□□□□□ -0.42
USB1-208ENST00000563207 PROP1O75360 226 aa12.44□□□□□ -0.42
USB1-208ENST00000563207 OR2F2O95006 317 aa12.44□□□□□ -0.42
USB1-208ENST00000563207 MOSP00540 346 aa12.44□□□□□ -0.42
USB1-208ENST00000563207 IGKV1D-33P01593 117 aa12.44□□□□□ -0.42
USB1-208ENST00000563207 IGKV1-33P01594 117 aa12.44□□□□□ -0.42
USB1-208ENST00000563207 CD74P04233 296 aa12.44□□□□□ -0.42
USB1-208ENST00000563207 CT45A6P0DMU7 189 aa12.44□□□□□ -0.42
USB1-208ENST00000563207 CT45A5P0DMU8 189 aa12.44□□□□□ -0.42
USB1-208ENST00000563207 CT45A7P0DMV0 189 aa12.44□□□□□ -0.42
USB1-208ENST00000563207 HERV-K104P61576 105 aa12.44□□□□□ -0.42
USB1-208ENST00000563207 ZNF45Q02386 682 aa12.44□□□□□ -0.42
USB1-208ENST00000563207 HES1Q14469 280 aa12.44□□□□□ -0.42
USB1-208ENST00000563207 MEF2DQ14814 521 aa12.44□□□□□ -0.42
USB1-208ENST00000563207 RNASE12Q5GAN4 147 aaKnown RBP12.44□□□□□ -0.42
USB1-208ENST00000563207 LPCAT3Q6P1A2 487 aa12.44□□□□□ -0.42
USB1-208ENST00000563207 C11orf88Q6PI97 169 aa12.44□□□□□ -0.42
USB1-208ENST00000563207 C10orf99Q6UWK7 81 aa12.44□□□□□ -0.42
USB1-208ENST00000563207 Q8N402 240 aa12.44□□□□□ -0.42
USB1-208ENST00000563207 OR5AN1Q8NGI8 311 aa12.44□□□□□ -0.42
USB1-208ENST00000563207 DEDD2Q8WXF8 326 aa12.44□□□□□ -0.42
USB1-208ENST00000563207 MOB3AQ96BX8 217 aa12.44□□□□□ -0.42
USB1-208ENST00000563207 THAP7Q9BT49 309 aaPredicted RBP12.44□□□□□ -0.42
USB1-208ENST00000563207 MRPL20Q9BYC9 149 aaKnown RBP12.44□□□□□ -0.42
USB1-208ENST00000563207 PRSS22Q9GZN4 317 aa12.44□□□□□ -0.42
USB1-208ENST00000563207 IGKV1D-13A0A0B4J2D9 117 aa12.43□□□□□ -0.42
USB1-208ENST00000563207 A0A1W2PRX2 142 aa12.43□□□□□ -0.42
USB1-208ENST00000563207 M0R1X1 148 aa12.43□□□□□ -0.42
USB1-208ENST00000563207 CD3DP04234 171 aa12.43□□□□□ -0.42
USB1-208ENST00000563207 IGKV1-13P0DP09 117 aa12.43□□□□□ -0.42
USB1-208ENST00000563207 TMEM11P17152 192 aa12.43□□□□□ -0.42
USB1-208ENST00000563207 THBS3P49746 956 aa12.43□□□□□ -0.42
USB1-208ENST00000563207 AP3S2P59780 193 aa12.43□□□□□ -0.42
USB1-208ENST00000563207 ZNF79Q15937 498 aa12.43□□□□□ -0.42
USB1-208ENST00000563207 TCTEX1D4Q5JR98 221 aa12.43□□□□□ -0.42
USB1-208ENST00000563207 STEAP1BQ6NZ63 245 aa12.43□□□□□ -0.42
USB1-208ENST00000563207 GDPD1Q8N9F7 314 aa12.43□□□□□ -0.42
USB1-208ENST00000563207 EAF1Q96JC9 268 aaPredicted RBP12.43□□□□□ -0.42
USB1-208ENST00000563207 RNF5Q99942 180 aa12.43□□□□□ -0.42
USB1-208ENST00000563207 ZNF2Q9BSG1 426 aaPredicted RBP12.43□□□□□ -0.42
USB1-208ENST00000563207 SLC25A33Q9BSK2 321 aa12.43□□□□□ -0.42
USB1-208ENST00000563207 ANKRD20A5PA0PJZ0 165 aa12.42□□□□□ -0.42
USB1-208ENST00000563207 FGF16O43320 207 aa12.42□□□□□ -0.42
USB1-208ENST00000563207 RAB3DO95716 219 aa12.42□□□□□ -0.42
USB1-208ENST00000563207 APOA2P02652 100 aa12.42□□□□□ -0.42
USB1-208ENST00000563207 AMY1AP04745 511 aa12.42□□□□□ -0.42
USB1-208ENST00000563207 AMY2AP04746 511 aa12.42□□□□□ -0.42
USB1-208ENST00000563207 AKAIN1P0CW23 69 aa12.42□□□□□ -0.42
USB1-208ENST00000563207 RRASP10301 218 aa12.42□□□□□ -0.42
USB1-208ENST00000563207 UCP3P55916 312 aa12.42□□□□□ -0.42
USB1-208ENST00000563207 KPRPQ5T749 579 aaPredicted RBP12.42□□□□□ -0.42
USB1-208ENST00000563207 ZNF66Q6ZN08 573 aa12.42□□□□□ -0.42
USB1-208ENST00000563207 SECTM1Q8WVN6 248 aa12.42□□□□□ -0.42
USB1-208ENST00000563207 R3HDM4Q96D70 268 aa12.42□□□□□ -0.42
USB1-208ENST00000563207 HSD17B10Q99714 261 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms