RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 IRF3Q14653 427 aa12.78□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 PLAC9Q5JTB6 97 aa12.78□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 POC5Q8NA72 575 aa12.78□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 OR5T1Q8NG75 326 aa12.78□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 CITED4Q96RK1 184 aa12.78□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 RSRP1Q9BUV0 290 aa12.78□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 ELOVL1Q9BW60 279 aa12.78□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 PLGRKTQ9HBL7 147 aa12.78□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 C19orf73Q9NVV2 129 aa12.78□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 RDH8Q9NYR8 311 aa12.78□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 ZNF221Q9UK13 617 aa12.78□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 STUB1Q9UNE7 303 aa12.78□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 AK6Q9Y3D8 172 aaKnown RBP12.78□□□□□ -0.36
VPS9D1-AS1-201ENST00000562298 A8MZ25 164 aa12.77□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 M0R1X1 148 aa12.77□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 IGLV2-23P01705 113 aa12.77□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 APOA2P02652 100 aa12.77□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 CLDN12P56749 244 aa12.77□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 ANKRD13BQ86YJ7 626 aa12.77□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 UFD1Q92890 307 aa12.77□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 CMSS1Q9BQ75 279 aaKnown RBP12.77□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 RANGRFQ9HD47 186 aaPredicted RBP12.77□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 ZNF355PQ9NSJ1 428 aa12.77□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 DNAH1Q9P2D7 4330 aa12.77□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 C13orf42A0A1B0GVH6 325 aa12.76□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 ANKRD34BA5PLL1 514 aa12.76□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 TRDCB7Z8K6 153 aa12.76□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 H3BUA1 57 aa12.76□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 LDLRAD4O15165 306 aa12.76□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 CRYGBP07316 175 aa12.76□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 CD3GP09693 182 aa12.76□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 RPS25P62851 125 aaKnown RBP12.76□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 DEFA5Q01523 94 aa12.76□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 PLA2G7Q13093 441 aa12.76□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 KLF5Q13887 457 aaPredicted RBP12.76□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 RAB11BQ15907 218 aa12.76□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 IL34Q6ZMJ4 242 aa12.76□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 C5orf30Q96GV9 206 aa12.76□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 EDA2RQ9HAV5 297 aa12.76□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 PALMDQ9NP74 551 aa12.76□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 SLC35D1Q9NTN3 355 aa12.76□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 HYDINQ4G0P3 5121 aa12.75□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 CNIH1O95406 144 aa12.75□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 ZP3P21754 424 aa12.75□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 TPBGQ13641 420 aa12.75□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 ZFAND6Q6FIF0 208 aa12.75□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.75□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 OR2D2Q9H210 308 aa12.75□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 ADAM30Q9UKF2 790 aa12.75□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 KCNK7Q9Y2U2 307 aa12.75□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 A0A0G2JLM5 398 aa12.74□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 LCE6AA0A183 80 aa12.74□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 MRGPRG-AS1Q2M3A8 158 aa12.74□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 C2orf76Q3KRA6 126 aa12.74□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 IGSF11Q5DX21 431 aa12.74□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 SGPP2Q8IWX5 399 aa12.74□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 OR56B1Q8NGI3 324 aa12.74□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 OR4A4PQ8NGN8 299 aa12.74□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 OR9G4Q8NGQ1 327 aa12.74□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 FAM3DQ96BQ1 224 aa12.74□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 HARBI1Q96MB7 349 aa12.74□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 SDHAF2Q9NX18 166 aa12.74□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 SCN3BQ9NY72 215 aa12.74□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 SRRM4A7MD48 611 aaKnown RBP12.73□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 FABP7O15540 132 aa12.73□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 RBMXL2O75526 392 aaKnown RBP12.73□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 ARL6IP5O75915 188 aa12.73□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 BRI3O95415 125 aa12.73□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 TRBV12-3P01733 135 aa12.73□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 HSMCR30P0CW71 290 aa12.73□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 CALRP27797 417 aaKnown RBP12.73□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 SERPINB10P48595 397 aa12.73□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 SYNJ2BPP57105 145 aa12.73□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 FABP5Q01469 135 aa12.73□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 MOGAT2Q3SYC2 334 aa12.73□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 THAP7Q9BT49 309 aaPredicted RBP12.73□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 CABLES2Q9BTV7 478 aa12.73□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 TINAGL1Q9GZM7 467 aaPredicted RBP12.73□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 TMEM272A0A1B0GTI8 110 aa12.72□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 BET1O15155 118 aa12.72□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 DENRO43583 198 aaKnown RBP12.72□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 FCGR3AP08637 254 aa12.72□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 GSTT2P0CG29 244 aa12.72□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 GSTT2BP0CG30 244 aa12.72□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 APELAP0DMC3 54 aa12.72□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 LGALS7P47929 136 aa12.72□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 DYRK1AQ13627 763 aa12.72□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 TRAM1Q15629 374 aa12.72□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 TMEM177Q53S58 311 aa12.72□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 ZNF343Q6P1L6 599 aa12.72□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 TMEM68Q96MH6 324 aa12.72□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 VCXQ9H320 206 aa12.72□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 DUSP21Q9H596 190 aa12.72□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 BIRC6Q9NR09 4857 aa12.71□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 TRBV6-7A0A0A0MS04 114 aa12.71□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 MLLT11Q13015 90 aaPredicted RBP12.71□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 HES5Q5TA89 166 aa12.71□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 BVESQ8NE79 360 aa12.71□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 OR10J5Q8NHC4 309 aa12.71□□□□□ -0.37
VPS9D1-AS1-201ENST00000562298 MAFIPQ8WZ33 124 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms