RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 CCDC112Q8NEF3 446 aa0.79□□□□□ -2.28
CHD9-204ENST00000561869 OR4C16Q8NGL9 310 aa0.79□□□□□ -2.28
CHD9-204ENST00000561869 JOSD2Q8TAC2 188 aa0.79□□□□□ -2.28
CHD9-204ENST00000561869 PIGXQ8TBF5 258 aa0.79□□□□□ -2.28
CHD9-204ENST00000561869 DDI1Q8WTU0 396 aa0.79□□□□□ -2.28
CHD9-204ENST00000561869 EEF1AKMT1Q8WVE0 214 aa0.79□□□□□ -2.28
CHD9-204ENST00000561869 RNF133Q8WVZ7 376 aa0.79□□□□□ -2.28
CHD9-204ENST00000561869 MND1Q9BWT6 205 aa0.79□□□□□ -2.28
CHD9-204ENST00000561869 DRC3Q9H069 523 aa0.79□□□□□ -2.28
CHD9-204ENST00000561869 TUBA4BQ9H853 241 aa0.79□□□□□ -2.28
CHD9-204ENST00000561869 TAS2R9Q9NYW1 312 aa0.79□□□□□ -2.28
CHD9-204ENST00000561869 EMC3Q9P0I2 261 aa0.79□□□□□ -2.28
CHD9-204ENST00000561869 POLR1DQ9Y2S0 133 aa0.79□□□□□ -2.28
CHD9-204ENST00000561869 HDGFL3Q9Y3E1 203 aa0.79□□□□□ -2.28
CHD9-204ENST00000561869 PCYT1BQ9Y5K3 369 aaPredicted RBP0.79□□□□□ -2.28
CHD9-204ENST00000561869 DICER1Q9UPY3 1922 aaKnown RBP0.79□□□□□ -2.28
CHD9-204ENST00000561869 ZNF638Q14966 1978 aaKnown RBP0.79□□□□□ -2.28
CHD9-204ENST00000561869 CHD5Q8TDI0 1954 aa0.79□□□□□ -2.28
CHD9-204ENST00000561869 C9orf84Q5VXU9 1444 aa0.79□□□□□ -2.28
CHD9-204ENST00000561869 REREQ9P2R6 1566 aa0.79□□□□□ -2.28
CHD9-204ENST00000561869 DSCAMO60469 2012 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 TMED7-TICAM2A0A0A6YYA0 188 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 A0A0J9YX75 114 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 GRIFINA4D1Z8 144 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 C5orf49A4QMS7 147 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 OR6C6A6NF89 314 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 OR5K4A6NMS3 321 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 LRRN3E7EW58 273 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 H0Y980 276 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 M0QZ92 97 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 PFDN6O15212 129 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 NDUFB2O95178 105 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 AHSA1O95433 338 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 APOMO95445 188 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 APOEP02649 317 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 TYMSP04818 313 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 REG1AP05451 166 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 IL3P08700 152 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 CBR1P16152 277 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 SLC25A16P16260 332 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 MYL12AP19105 171 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 CRHBPP24387 322 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 LPAR6P43657 344 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 CDC34P49427 236 aaPredicted RBP0.78□□□□□ -2.28
CHD9-204ENST00000561869 RWDD2BP57060 319 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 FKBP1AP62942 108 aaKnown RBP0.78□□□□□ -2.28
CHD9-204ENST00000561869 BTN3A2P78410 334 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 HOXC5Q00444 222 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 GNA13Q14344 377 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 JOSD1Q15040 202 aaPredicted RBP0.78□□□□□ -2.28
CHD9-204ENST00000561869 PLPPR5Q32ZL2 321 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 COQ5Q5HYK3 327 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 SAPCD1Q5SSQ6 148 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.78□□□□□ -2.28
CHD9-204ENST00000561869 N4BP2L1Q5TBK1 243 aaPredicted RBP0.78□□□□□ -2.28
CHD9-204ENST00000561869 OGFRL1Q5TC84 451 aaPredicted RBP0.78□□□□□ -2.28
CHD9-204ENST00000561869 CST9Q5W186 159 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 CD200R1LQ6Q8B3 271 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 ZNF322Q6U7Q0 402 aaPredicted RBP0.78□□□□□ -2.28
CHD9-204ENST00000561869 C2orf91Q6ZV80 131 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 SPATA12Q7Z6I5 190 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 GPR32P1Q8NGA4 272 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 OR10A6Q8NH74 314 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 CLDND2Q8NHS1 167 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 ERMNQ8TAM6 284 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 OPTNQ96CV9 577 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 OR52B2Q96RD2 323 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 KLF6Q99612 283 aaPredicted RBP0.78□□□□□ -2.28
CHD9-204ENST00000561869 SPZ1Q9BXG8 430 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 PARD6GQ9BYG4 376 aaPredicted RBP0.78□□□□□ -2.28
CHD9-204ENST00000561869 CXCL16Q9H2A7 254 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 MAP1LC3AQ9H492 121 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 SNX12Q9UMY4 172 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 FAM215AQ9Y5M1 114 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 KIF15Q9NS87 1388 aa0.78□□□□□ -2.28
CHD9-204ENST00000561869 COL5A3P25940 1745 aaPredicted RBP0.78□□□□□ -2.29
CHD9-204ENST00000561869 COL11A1P12107 1806 aaPredicted RBP0.78□□□□□ -2.29
CHD9-204ENST00000561869 NAV1Q8NEY1 1877 aa0.78□□□□□ -2.29
CHD9-204ENST00000561869 GPR98Q8WXG9 6306 aa0.77□□□□□ -2.29
CHD9-204ENST00000561869 BAHCC1Q9P281 2608 aa0.77□□□□□ -2.29
CHD9-204ENST00000561869 KNCNA6PVL3 124 aa0.77□□□□□ -2.29
CHD9-204ENST00000561869 H3BPC8 53 aa0.77□□□□□ -2.29
CHD9-204ENST00000561869 J3QKU1 62 aa0.77□□□□□ -2.29
CHD9-204ENST00000561869 UBFD1O14562 309 aaKnown RBP0.77□□□□□ -2.29
CHD9-204ENST00000561869 ACOX3O15254 700 aa0.77□□□□□ -2.29
CHD9-204ENST00000561869 CRTAPO75718 401 aaPredicted RBP0.77□□□□□ -2.29
CHD9-204ENST00000561869 ISG15P05161 165 aa0.77□□□□□ -2.29
CHD9-204ENST00000561869 KRT7P08729 469 aa0.77□□□□□ -2.29
CHD9-204ENST00000561869 GZMBP10144 247 aa0.77□□□□□ -2.29
CHD9-204ENST00000561869 CPMP14384 443 aa0.77□□□□□ -2.29
CHD9-204ENST00000561869 CD36P16671 472 aa0.77□□□□□ -2.29
CHD9-204ENST00000561869 GZMHP20718 246 aa0.77□□□□□ -2.29
CHD9-204ENST00000561869 CCL1P22362 96 aa0.77□□□□□ -2.29
CHD9-204ENST00000561869 CD24P25063 80 aa0.77□□□□□ -2.29
CHD9-204ENST00000561869 RPL12P30050 165 aaKnown RBP0.77□□□□□ -2.29
CHD9-204ENST00000561869 SERPINB10P48595 397 aa0.77□□□□□ -2.29
CHD9-204ENST00000561869 BLVRAP53004 296 aa0.77□□□□□ -2.29
CHD9-204ENST00000561869 CTBP2P56545 445 aa0.77□□□□□ -2.29
CHD9-204ENST00000561869 RBM11P57052 281 aaKnown RBP0.77□□□□□ -2.29
CHD9-204ENST00000561869 TMEM33P57088 247 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms