RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 C5orf63A6NC05 138 aa15.83■□□□□ 0.12
RAB40C-206ENST00000561781 C1QTNF9BB2RNN3 333 aa15.83■□□□□ 0.12
RAB40C-206ENST00000561781 ZNF324O75467 553 aaPredicted RBP15.83■□□□□ 0.12
RAB40C-206ENST00000561781 PMCHP20382 165 aa15.83■□□□□ 0.12
RAB40C-206ENST00000561781 OR1D4P47884 311 aa15.83■□□□□ 0.12
RAB40C-206ENST00000561781 GFRA1P56159 465 aa15.83■□□□□ 0.12
RAB40C-206ENST00000561781 CLDN17P56750 224 aa15.83■□□□□ 0.12
RAB40C-206ENST00000561781 PSG9Q00887 426 aa15.83■□□□□ 0.12
RAB40C-206ENST00000561781 DEFB133Q30KQ1 61 aa15.83■□□□□ 0.12
RAB40C-206ENST00000561781 TBC1D26Q86UD7 250 aa15.83■□□□□ 0.12
RAB40C-206ENST00000561781 LMX1AQ8TE12 382 aa15.83■□□□□ 0.12
RAB40C-206ENST00000561781 PIGTQ969N2 578 aa15.83■□□□□ 0.12
RAB40C-206ENST00000561781 SARAFQ96BY9 339 aa15.83■□□□□ 0.12
RAB40C-206ENST00000561781 HRASLS2Q9NWW9 162 aa15.83■□□□□ 0.12
RAB40C-206ENST00000561781 TIMM9Q9Y5J7 89 aa15.83■□□□□ 0.12
RAB40C-206ENST00000561781 LRP4O75096 1905 aa15.82■□□□□ 0.12
RAB40C-206ENST00000561781 SPTBN2O15020 2390 aa15.82■□□□□ 0.12
RAB40C-206ENST00000561781 C1QTNF9P0C862 333 aa15.82■□□□□ 0.12
RAB40C-206ENST00000561781 MPV17L2Q567V2 206 aa15.82■□□□□ 0.12
RAB40C-206ENST00000561781 CLEC5AQ9NY25 188 aa15.82■□□□□ 0.12
RAB40C-206ENST00000561781 PDE6DO43924 150 aa15.82■□□□□ 0.12
RAB40C-206ENST00000561781 PAGE4O60829 102 aa15.82■□□□□ 0.12
RAB40C-206ENST00000561781 IGLC1P0CG04 106 aa15.82■□□□□ 0.12
RAB40C-206ENST00000561781 RHOBP62745 196 aa15.82■□□□□ 0.12
RAB40C-206ENST00000561781 FAM58AQ8N1B3 248 aa15.82■□□□□ 0.12
RAB40C-206ENST00000561781 FAM216AQ8WUB2 273 aa15.82■□□□□ 0.12
RAB40C-206ENST00000561781 PEF1Q9UBV8 284 aaKnown RBP15.82■□□□□ 0.12
RAB40C-206ENST00000561781 ARHGEF17Q96PE2 2063 aaPredicted RBP15.81■□□□□ 0.12
RAB40C-206ENST00000561781 M0R1X1 148 aa15.81■□□□□ 0.12
RAB40C-206ENST00000561781 RER1O15258 196 aa15.81■□□□□ 0.12
RAB40C-206ENST00000561781 IL12BP29460 328 aa15.81■□□□□ 0.12
RAB40C-206ENST00000561781 OTX1P32242 354 aaPredicted RBP15.81■□□□□ 0.12
RAB40C-206ENST00000561781 CDAP32320 146 aa15.81■□□□□ 0.12
RAB40C-206ENST00000561781 BRICD5Q6PL45 260 aa15.81■□□□□ 0.12
RAB40C-206ENST00000561781 ATOH7Q8N100 152 aa15.81■□□□□ 0.12
RAB40C-206ENST00000561781 SLC25A45Q8N413 288 aa15.81■□□□□ 0.12
RAB40C-206ENST00000561781 OR2Y1Q8NGV0 311 aa15.81■□□□□ 0.12
RAB40C-206ENST00000561781 GATAD1Q8WUU5 269 aa15.81■□□□□ 0.12
RAB40C-206ENST00000561781 TAAR3PQ9P1P4 343 aa15.81■□□□□ 0.12
RAB40C-206ENST00000561781 PIEZO1Q92508 2521 aa15.81■□□□□ 0.12
RAB40C-206ENST00000561781 C11orf94C9JXX5 98 aa15.8■□□□□ 0.12
RAB40C-206ENST00000561781 CDX4O14627 284 aaPredicted RBP15.8■□□□□ 0.12
RAB40C-206ENST00000561781 DEGS1O15121 323 aa15.8■□□□□ 0.12
RAB40C-206ENST00000561781 PPYP01298 95 aa15.8■□□□□ 0.12
RAB40C-206ENST00000561781 NPPCP23582 126 aa15.8■□□□□ 0.12
RAB40C-206ENST00000561781 WASHC3Q9Y3C0 194 aa15.8■□□□□ 0.12
RAB40C-206ENST00000561781 DOCK11Q5JSL3 2073 aa15.8■□□□□ 0.12
RAB40C-206ENST00000561781 CNOT1A5YKK6 2376 aaKnown RBP15.8■□□□□ 0.12
RAB40C-206ENST00000561781 KIAA1324LA8MWY0 1029 aaPredicted RBP15.8■□□□□ 0.12
RAB40C-206ENST00000561781 C22orf46C9J442 243 aa15.8■□□□□ 0.12
RAB40C-206ENST00000561781 CA2P00918 260 aa15.8■□□□□ 0.12
RAB40C-206ENST00000561781 IGKV1D-33P01593 117 aa15.8■□□□□ 0.12
RAB40C-206ENST00000561781 IGKV1-33P01594 117 aa15.8■□□□□ 0.12
RAB40C-206ENST00000561781 ZNF83P51522 516 aa15.8■□□□□ 0.12
RAB40C-206ENST00000561781 PSG4Q00888 419 aa15.8■□□□□ 0.12
RAB40C-206ENST00000561781 C12orf54Q6X4T0 127 aa15.8■□□□□ 0.12
RAB40C-206ENST00000561781 HAPLN4Q86UW8 402 aa15.8■□□□□ 0.12
RAB40C-206ENST00000561781 TAF15Q92804 592 aaKnown RBP eCLIP15.8■□□□□ 0.12
RAB40C-206ENST00000561781 NAT6Q93015 286 aa15.8■□□□□ 0.12
RAB40C-206ENST00000561781 LYZL4Q96KX0 146 aa15.8■□□□□ 0.12
RAB40C-206ENST00000561781 NUDT22Q9BRQ3 303 aa15.8■□□□□ 0.12
RAB40C-206ENST00000561781 PSG11Q9UQ72 335 aa15.8■□□□□ 0.12
RAB40C-206ENST00000561781 RNPS1Q15287 305 aaKnown RBP15.79■□□□□ 0.12
RAB40C-206ENST00000561781 BVES-AS1Q5T3Y7 98 aa15.79■□□□□ 0.12
RAB40C-206ENST00000561781 H1FNTQ75WM6 255 aaPredicted RBP15.79■□□□□ 0.12
RAB40C-206ENST00000561781 OR10G8Q8NGN5 311 aa15.79■□□□□ 0.12
RAB40C-206ENST00000561781 GNB1LQ9BYB4 327 aa15.79■□□□□ 0.12
RAB40C-206ENST00000561781 SLC25A22Q9H936 323 aa15.79■□□□□ 0.12
RAB40C-206ENST00000561781 PNO1Q9NRX1 252 aaKnown RBP15.79■□□□□ 0.12
RAB40C-206ENST00000561781 FRG2CA6NGY1 282 aa15.79■□□□□ 0.12
RAB40C-206ENST00000561781 SNURFLB1AK76 121 aa15.79■□□□□ 0.12
RAB40C-206ENST00000561781 CD5LO43866 347 aa15.79■□□□□ 0.12
RAB40C-206ENST00000561781 GNG7O60262 68 aa15.79■□□□□ 0.12
RAB40C-206ENST00000561781 ZNF295-AS1Q8N0V1 137 aa15.79■□□□□ 0.12
RAB40C-206ENST00000561781 IL36BQ9NZH7 164 aa15.79■□□□□ 0.12
RAB40C-206ENST00000561781 ALG1L2C9J202 215 aa15.78■□□□□ 0.12
RAB40C-206ENST00000561781 H0YJW9 148 aa15.78■□□□□ 0.12
RAB40C-206ENST00000561781 TNFP01375 233 aa15.78■□□□□ 0.12
RAB40C-206ENST00000561781 IGLL1P15814 213 aa15.78■□□□□ 0.12
RAB40C-206ENST00000561781 OR1N2Q8NGR9 330 aa15.78■□□□□ 0.12
RAB40C-206ENST00000561781 GPHA2Q96T91 129 aa15.78■□□□□ 0.12
RAB40C-206ENST00000561781 PNRC2Q9NPJ4 139 aaKnown RBP15.78■□□□□ 0.12
RAB40C-206ENST00000561781 OR51B2Q9Y5P1 312 aa15.78■□□□□ 0.12
RAB40C-206ENST00000561781 ASXL3Q9C0F0 2248 aa15.78■□□□□ 0.12
RAB40C-206ENST00000561781 G3V3Y1 287 aa15.78■□□□□ 0.12
RAB40C-206ENST00000561781 HMGB3O15347 200 aaKnown RBP15.78■□□□□ 0.12
RAB40C-206ENST00000561781 MT-ND6P03923 174 aa15.78■□□□□ 0.12
RAB40C-206ENST00000561781 PPIAL4GP0DN37 164 aa15.78■□□□□ 0.12
RAB40C-206ENST00000561781 MFAP5Q13361 173 aa15.78■□□□□ 0.12
RAB40C-206ENST00000561781 DTX1Q86Y01 620 aa15.78■□□□□ 0.12
RAB40C-206ENST00000561781 OR1B1Q8NGR6 318 aa15.78■□□□□ 0.12
RAB40C-206ENST00000561781 ZNF48Q96MX3 618 aaPredicted RBP15.78■□□□□ 0.12
RAB40C-206ENST00000561781 SFXN3Q9BWM7 321 aa15.78■□□□□ 0.12
RAB40C-206ENST00000561781 PIGBOS1A0A0B4J2F0 54 aa15.77■□□□□ 0.12
RAB40C-206ENST00000561781 ANGPTL7O43827 346 aa15.77■□□□□ 0.12
RAB40C-206ENST00000561781 NUDT3O95989 172 aa15.77■□□□□ 0.12
RAB40C-206ENST00000561781 SLC25A6P12236 298 aa15.77■□□□□ 0.12
RAB40C-206ENST00000561781 TIMP3P35625 211 aa15.77■□□□□ 0.12
RAB40C-206ENST00000561781 IER3P46695 156 aa15.77■□□□□ 0.12
RAB40C-206ENST00000561781 KRTCAP3Q53RY4 240 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms