RNA–Protein interactions for RNA: ENST00000561734.5

RPUSD1-202, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-202ENST00000561734 CCL11P51671 97 aa16.92■□□□□ 0.3
RPUSD1-202ENST00000561734 GFI1BQ5VTD9 330 aa16.92■□□□□ 0.3
RPUSD1-202ENST00000561734 EDARADDQ8WWZ3 215 aa16.92■□□□□ 0.3
RPUSD1-202ENST00000561734 SMIM7Q9BQ49 75 aa16.92■□□□□ 0.3
RPUSD1-202ENST00000561734 NKX2-8O15522 239 aa16.91■□□□□ 0.3
RPUSD1-202ENST00000561734 RBMXL2O75526 392 aaKnown RBP16.91■□□□□ 0.3
RPUSD1-202ENST00000561734 IGHV2-70P01814 119 aa16.91■□□□□ 0.3
RPUSD1-202ENST00000561734 NKX6-1P78426 367 aaPredicted RBP16.91■□□□□ 0.3
RPUSD1-202ENST00000561734 FFAR4Q5NUL3 377 aa16.91■□□□□ 0.3
RPUSD1-202ENST00000561734 FDCSPQ8NFU4 85 aa16.91■□□□□ 0.3
RPUSD1-202ENST00000561734 OR10G9Q8NGN4 311 aa16.91■□□□□ 0.3
RPUSD1-202ENST00000561734 OR10G7Q8NGN6 311 aa16.91■□□□□ 0.3
RPUSD1-202ENST00000561734 ABHD5Q8WTS1 349 aa16.91■□□□□ 0.3
RPUSD1-202ENST00000561734 GATAD1Q8WUU5 269 aa16.91■□□□□ 0.3
RPUSD1-202ENST00000561734 FRZBQ92765 325 aa16.91■□□□□ 0.3
RPUSD1-202ENST00000561734 TAAR6Q96RI8 345 aa16.91■□□□□ 0.3
RPUSD1-202ENST00000561734 DCTN5Q9BTE1 182 aa16.91■□□□□ 0.3
RPUSD1-202ENST00000561734 GAR1Q9NY12 217 aaKnown RBP16.91■□□□□ 0.3
RPUSD1-202ENST00000561734 PSG11Q9UQ72 335 aa16.91■□□□□ 0.3
RPUSD1-202ENST00000561734 URB1O60287 2271 aaKnown RBP16.91■□□□□ 0.3
RPUSD1-202ENST00000561734 LOC400499M0QZD8 3231 aa16.91■□□□□ 0.3
RPUSD1-202ENST00000561734 CTXND1A0A1B0GTU2 59 aa16.91■□□□□ 0.3
RPUSD1-202ENST00000561734 TRGC1P0CF51 173 aa16.91■□□□□ 0.3
RPUSD1-202ENST00000561734 S100A2P29034 98 aa16.91■□□□□ 0.3
RPUSD1-202ENST00000561734 ADIRFQ15847 76 aa16.91■□□□□ 0.3
RPUSD1-202ENST00000561734 SMIM21Q3B7S5 101 aa16.91■□□□□ 0.3
RPUSD1-202ENST00000561734 PYY3Q5JQD4 70 aa16.91■□□□□ 0.3
RPUSD1-202ENST00000561734 AGMATQ9BSE5 352 aa16.91■□□□□ 0.3
RPUSD1-202ENST00000561734 MRPL37Q9BZE1 423 aaKnown RBP16.91■□□□□ 0.3
RPUSD1-202ENST00000561734 NAT8Q9UHE5 227 aa16.91■□□□□ 0.3
RPUSD1-202ENST00000561734 SOD3P08294 240 aa16.9■□□□□ 0.3
RPUSD1-202ENST00000561734 KITLGP21583 273 aa16.9■□□□□ 0.3
RPUSD1-202ENST00000561734 RPUSD4Q96CM3 377 aaKnown RBP16.9■□□□□ 0.3
RPUSD1-202ENST00000561734 LURAP1Q96LR2 239 aa16.9■□□□□ 0.3
RPUSD1-202ENST00000561734 NPCDR1Q9BY65 106 aa16.9■□□□□ 0.3
RPUSD1-202ENST00000561734 OPN1MWP04001 364 aa16.89■□□□□ 0.3
RPUSD1-202ENST00000561734 OPN1MW2P0DN77 364 aa16.89■□□□□ 0.3
RPUSD1-202ENST00000561734 OPN1MW3P0DN78 364 aa16.89■□□□□ 0.3
RPUSD1-202ENST00000561734 PSMB3P49720 205 aa16.89■□□□□ 0.3
RPUSD1-202ENST00000561734 FOXF2Q12947 444 aa16.89■□□□□ 0.3
RPUSD1-202ENST00000561734 LTC4SQ16873 150 aa16.89■□□□□ 0.3
RPUSD1-202ENST00000561734 C4orf17Q53FE4 359 aa16.89■□□□□ 0.3
RPUSD1-202ENST00000561734 PDZD11Q5EBL8 140 aa16.89■□□□□ 0.3
RPUSD1-202ENST00000561734 NCR3LG1Q68D85 454 aa16.89■□□□□ 0.3
RPUSD1-202ENST00000561734 ZNF66Q6ZN08 573 aa16.89■□□□□ 0.3
RPUSD1-202ENST00000561734 CYP2G1PQ6ZSU1 146 aa16.89■□□□□ 0.3
RPUSD1-202ENST00000561734 CD177Q8N6Q3 437 aa16.89■□□□□ 0.3
RPUSD1-202ENST00000561734 CIB3Q96Q77 187 aaPredicted RBP16.89■□□□□ 0.3
RPUSD1-202ENST00000561734 CTDSP1Q9GZU7 261 aa16.89■□□□□ 0.3
RPUSD1-202ENST00000561734 MARCH11A6NNE9 402 aa16.89■□□□□ 0.29
RPUSD1-202ENST00000561734 ZNF891A8MT65 544 aaPredicted RBP16.89■□□□□ 0.29
RPUSD1-202ENST00000561734 SEC14L6B5MCN3 397 aa16.89■□□□□ 0.29
RPUSD1-202ENST00000561734 IFNL4K9M1U5 179 aa16.89■□□□□ 0.29
RPUSD1-202ENST00000561734 EDDM3AQ14507 147 aa16.89■□□□□ 0.29
RPUSD1-202ENST00000561734 C1orf162Q8NEQ5 155 aaPredicted RBP16.89■□□□□ 0.29
RPUSD1-202ENST00000561734 TRBV24-1A0A075B6N3 115 aa16.88■□□□□ 0.29
RPUSD1-202ENST00000561734 TRAV20A0A0B4J274 112 aa16.88■□□□□ 0.29
RPUSD1-202ENST00000561734 C15orf65H3BRN8 121 aa16.88■□□□□ 0.29
RPUSD1-202ENST00000561734 PPP1R2P9O14990 202 aa16.88■□□□□ 0.29
RPUSD1-202ENST00000561734 KBTBD11O94819 623 aa16.88■□□□□ 0.29
RPUSD1-202ENST00000561734 MBP02144 154 aa16.88■□□□□ 0.29
RPUSD1-202ENST00000561734 DEFA4P12838 97 aa16.88■□□□□ 0.29
RPUSD1-202ENST00000561734 TMEM241Q24JQ0 296 aa16.88■□□□□ 0.29
RPUSD1-202ENST00000561734 VWC2Q2TAL6 325 aa16.88■□□□□ 0.29
RPUSD1-202ENST00000561734 HIST3H2BBQ8N257 126 aa16.88■□□□□ 0.29
RPUSD1-202ENST00000561734 TCTEX1D1Q8N7M0 179 aa16.88■□□□□ 0.29
RPUSD1-202ENST00000561734 LRRC29Q8WV35 223 aa16.88■□□□□ 0.29
RPUSD1-202ENST00000561734 HSD17B10Q99714 261 aaKnown RBP16.88■□□□□ 0.29
RPUSD1-202ENST00000561734 LAMP3Q9UQV4 416 aa16.88■□□□□ 0.29
RPUSD1-202ENST00000561734 PHOX2AO14813 284 aa16.88■□□□□ 0.29
RPUSD1-202ENST00000561734 MDKP21741 143 aaPredicted RBP16.88■□□□□ 0.29
RPUSD1-202ENST00000561734 ZNF718Q3SXZ3 478 aa16.88■□□□□ 0.29
RPUSD1-202ENST00000561734 CDPF1Q6NVV7 123 aa16.88■□□□□ 0.29
RPUSD1-202ENST00000561734 C16orf82Q7Z2V1 217 aa16.88■□□□□ 0.29
RPUSD1-202ENST00000561734 PLPPR2Q96GM1 343 aa16.88■□□□□ 0.29
RPUSD1-202ENST00000561734 QTRT1Q9BXR0 403 aaKnown RBP16.88■□□□□ 0.29
RPUSD1-202ENST00000561734 GPR61Q9BZJ8 451 aa16.88■□□□□ 0.29
RPUSD1-202ENST00000561734 USF3Q68DE3 2245 aa16.87■□□□□ 0.29
RPUSD1-202ENST00000561734 GCH1P30793 250 aa16.87■□□□□ 0.29
RPUSD1-202ENST00000561734 TRIP6Q15654 476 aaKnown RBP16.87■□□□□ 0.29
RPUSD1-202ENST00000561734 OR10D4PQ8NGN7 298 aa16.87■□□□□ 0.29
RPUSD1-202ENST00000561734 RAB24Q969Q5 203 aa16.87■□□□□ 0.29
RPUSD1-202ENST00000561734 ACTR3CQ9C0K3 210 aaPredicted RBP16.87■□□□□ 0.29
RPUSD1-202ENST00000561734 PARLQ9H300 379 aa16.87■□□□□ 0.29
RPUSD1-202ENST00000561734 IGHV2OR16-5A0A0B4J2B6 119 aa16.87■□□□□ 0.29
RPUSD1-202ENST00000561734 IGHV1-18A0A0C4DH31 117 aa16.87■□□□□ 0.29
RPUSD1-202ENST00000561734 SPINT2O43291 252 aa16.87■□□□□ 0.29
RPUSD1-202ENST00000561734 RPL23P62829 140 aaKnown RBP16.87■□□□□ 0.29
RPUSD1-202ENST00000561734 ZNF709Q8N972 641 aa16.87■□□□□ 0.29
RPUSD1-202ENST00000561734 OR4F5Q8NH21 305 aa16.87■□□□□ 0.29
RPUSD1-202ENST00000561734 OR4F4Q96R69 305 aa16.87■□□□□ 0.29
RPUSD1-202ENST00000561734 TRBV23-1A0A0A0MS06 115 aa16.86■□□□□ 0.29
RPUSD1-202ENST00000561734 C15orf62A8K5M9 175 aa16.86■□□□□ 0.29
RPUSD1-202ENST00000561734 TMEM250H0YL14 139 aa16.86■□□□□ 0.29
RPUSD1-202ENST00000561734 AQP7O14520 342 aa16.86■□□□□ 0.29
RPUSD1-202ENST00000561734 TGOLN2O43493 480 aa16.86■□□□□ 0.29
RPUSD1-202ENST00000561734 IGLV1-44P01699 117 aa16.86■□□□□ 0.29
RPUSD1-202ENST00000561734 OR9G9P0C7N8 305 aa16.86■□□□□ 0.29
RPUSD1-202ENST00000561734 EGR1P18146 543 aa16.86■□□□□ 0.29
RPUSD1-202ENST00000561734 BSXQ3C1V8 233 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms