RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 TMEM200BQ69YZ2 307 aa6.17□□□□□ -1.42
TPM1-231ENST00000561395 C11orf87Q6NUJ2 197 aa6.17□□□□□ -1.42
TPM1-231ENST00000561395 TMEM65Q6PI78 240 aa6.17□□□□□ -1.42
TPM1-231ENST00000561395 ZNF841Q6ZN19 808 aa6.17□□□□□ -1.42
TPM1-231ENST00000561395 ZNF695Q8IW36 515 aa6.17□□□□□ -1.42
TPM1-231ENST00000561395 SLC35G3Q8N808 338 aa6.17□□□□□ -1.42
TPM1-231ENST00000561395 ZBTB8BQ8NAP8 495 aaPredicted RBP6.17□□□□□ -1.42
TPM1-231ENST00000561395 OR10A7Q8NGE5 316 aa6.17□□□□□ -1.42
TPM1-231ENST00000561395 OR52M1Q8NGK5 317 aa6.17□□□□□ -1.42
TPM1-231ENST00000561395 H1FXQ92522 213 aaKnown RBP6.17□□□□□ -1.42
TPM1-231ENST00000561395 RAB1CQ92928 201 aa6.17□□□□□ -1.42
TPM1-231ENST00000561395 RBPMSQ93062 196 aaKnown RBP6.17□□□□□ -1.42
TPM1-231ENST00000561395 TIMD4Q96H15 378 aa6.17□□□□□ -1.42
TPM1-231ENST00000561395 ZNF714Q96N38 554 aa6.17□□□□□ -1.42
TPM1-231ENST00000561395 ABHD14AQ9BUJ0 271 aa6.17□□□□□ -1.42
TPM1-231ENST00000561395 IFI27L2Q9H2X8 130 aa6.17□□□□□ -1.42
TPM1-231ENST00000561395 RPUSD1Q9UJJ7 312 aaKnown RBP6.17□□□□□ -1.42
TPM1-231ENST00000561395 RNF150Q9ULK6 438 aa6.17□□□□□ -1.42
TPM1-231ENST00000561395 TMED3Q9Y3Q3 217 aa6.17□□□□□ -1.42
TPM1-231ENST00000561395 F5H0A9 414 aaPredicted RBP6.16□□□□□ -1.42
TPM1-231ENST00000561395 OVOL3O00110 214 aa6.16□□□□□ -1.42
TPM1-231ENST00000561395 RGS13O14921 159 aa6.16□□□□□ -1.42
TPM1-231ENST00000561395 EREGO14944 169 aa6.16□□□□□ -1.42
TPM1-231ENST00000561395 SLC31A2O15432 143 aa6.16□□□□□ -1.42
TPM1-231ENST00000561395 PPIHO43447 177 aaKnown RBP6.16□□□□□ -1.42
TPM1-231ENST00000561395 MMP23AO75900 390 aa6.16□□□□□ -1.42
TPM1-231ENST00000561395 SERPINE2P07093 398 aa6.16□□□□□ -1.42
TPM1-231ENST00000561395 PET100P0DJ07 73 aa6.16□□□□□ -1.42
TPM1-231ENST00000561395 LYL1P12980 280 aa6.16□□□□□ -1.42
TPM1-231ENST00000561395 RPA2P15927 270 aa6.16□□□□□ -1.42
TPM1-231ENST00000561395 CXCL2P19875 107 aa6.16□□□□□ -1.42
TPM1-231ENST00000561395 ZNF134P52741 427 aa6.16□□□□□ -1.42
TPM1-231ENST00000561395 EFNA4P52798 201 aa6.16□□□□□ -1.42
TPM1-231ENST00000561395 DLX6P56179 175 aa6.16□□□□□ -1.42
TPM1-231ENST00000561395 RPL30P62888 115 aaKnown RBP6.16□□□□□ -1.42
TPM1-231ENST00000561395 IFITM2Q01629 132 aa6.16□□□□□ -1.42
TPM1-231ENST00000561395 Q3ZCU0 254 aa6.16□□□□□ -1.42
TPM1-231ENST00000561395 LRRC37A5PQ49AS3 106 aa6.16□□□□□ -1.42
TPM1-231ENST00000561395 ESCO2Q56NI9 601 aa6.16□□□□□ -1.42
TPM1-231ENST00000561395 NMSQ5H8A3 153 aa6.16□□□□□ -1.42
TPM1-231ENST00000561395 UTF1Q5T230 341 aa6.16□□□□□ -1.42
TPM1-231ENST00000561395 HEPN1Q6WQI6 88 aa6.16□□□□□ -1.42
TPM1-231ENST00000561395 ZNF66Q6ZN08 573 aa6.16□□□□□ -1.42
TPM1-231ENST00000561395 SLC25A48Q6ZT89 311 aaKnown RBP6.16□□□□□ -1.42
TPM1-231ENST00000561395 TCTEX1D1Q8N7M0 179 aa6.16□□□□□ -1.42
TPM1-231ENST00000561395 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.16□□□□□ -1.42
TPM1-231ENST00000561395 ZNF439Q8NDP4 499 aa6.16□□□□□ -1.42
TPM1-231ENST00000561395 OR8B3Q8NGG8 313 aa6.16□□□□□ -1.42
TPM1-231ENST00000561395 THAP6Q8TBB0 222 aa6.16□□□□□ -1.42
TPM1-231ENST00000561395 IGFBPL1Q8WX77 278 aa6.16□□□□□ -1.42
TPM1-231ENST00000561395 LEAP2Q969E1 77 aa6.16□□□□□ -1.42
TPM1-231ENST00000561395 NEIL1Q96FI4 390 aaPredicted RBP6.16□□□□□ -1.42
TPM1-231ENST00000561395 ABHD14BQ96IU4 210 aa6.16□□□□□ -1.42
TPM1-231ENST00000561395 OR8B2Q96RD0 313 aa6.16□□□□□ -1.42
TPM1-231ENST00000561395 REG4Q9BYZ8 158 aa6.16□□□□□ -1.42
TPM1-231ENST00000561395 SLA2Q9H6Q3 261 aa6.16□□□□□ -1.42
TPM1-231ENST00000561395 FAM212BQ9NTI7 297 aaPredicted RBP6.16□□□□□ -1.42
TPM1-231ENST00000561395 SDHAF2Q9NX18 166 aa6.16□□□□□ -1.42
TPM1-231ENST00000561395 MBD2Q9UBB5 411 aa6.16□□□□□ -1.42
TPM1-231ENST00000561395 MIOXQ9UGB7 285 aa6.16□□□□□ -1.42
TPM1-231ENST00000561395 TNFSF18Q9UNG2 199 aa6.16□□□□□ -1.42
TPM1-231ENST00000561395 H0YIZ8 118 aa6.15□□□□□ -1.42
TPM1-231ENST00000561395 L7N2F9 121 aa6.15□□□□□ -1.42
TPM1-231ENST00000561395 ARPC5O15511 151 aa6.15□□□□□ -1.42
TPM1-231ENST00000561395 NDUFS7O75251 213 aa6.15□□□□□ -1.42
TPM1-231ENST00000561395 IGKV1-39P01597 117 aa6.15□□□□□ -1.42
TPM1-231ENST00000561395 IGHV3-7P01780 117 aa6.15□□□□□ -1.42
TPM1-231ENST00000561395 IGKV1D-39P04432 117 aa6.15□□□□□ -1.42
TPM1-231ENST00000561395 CCL3L1P16619 93 aa6.15□□□□□ -1.42
TPM1-231ENST00000561395 C4BPBP20851 252 aa6.15□□□□□ -1.42
TPM1-231ENST00000561395 VDAC1P21796 283 aa6.15□□□□□ -1.42
TPM1-231ENST00000561395 NFYBP25208 207 aa6.15□□□□□ -1.42
TPM1-231ENST00000561395 DUTP33316 252 aaKnown RBP6.15□□□□□ -1.42
TPM1-231ENST00000561395 TMEM33P57088 247 aa6.15□□□□□ -1.42
TPM1-231ENST00000561395 S100A10P60903 97 aa6.15□□□□□ -1.42
TPM1-231ENST00000561395 CATR1Q13166 79 aa6.15□□□□□ -1.42
TPM1-231ENST00000561395 RAB32Q13637 225 aa6.15□□□□□ -1.42
TPM1-231ENST00000561395 ZNF585BQ52M93 769 aa6.15□□□□□ -1.42
TPM1-231ENST00000561395 ARSJQ5FYB0 599 aaPredicted RBP6.15□□□□□ -1.42
TPM1-231ENST00000561395 CT45A1Q5HYN5 189 aa6.15□□□□□ -1.42
TPM1-231ENST00000561395 WDR25Q64LD2 544 aaPredicted RBP6.15□□□□□ -1.42
TPM1-231ENST00000561395 PRSS54Q6PEW0 395 aa6.15□□□□□ -1.42
TPM1-231ENST00000561395 BTNL3Q6UXE8 466 aa6.15□□□□□ -1.42
TPM1-231ENST00000561395 ZNF546Q86UE3 836 aa6.15□□□□□ -1.42
TPM1-231ENST00000561395 FAM219AQ8IW50 185 aa6.15□□□□□ -1.42
TPM1-231ENST00000561395 OR4D5Q8NGN0 318 aa6.15□□□□□ -1.42
TPM1-231ENST00000561395 CT45A3Q8NHU0 189 aa6.15□□□□□ -1.42
TPM1-231ENST00000561395 C8orf46Q8TAG6 207 aa6.15□□□□□ -1.42
TPM1-231ENST00000561395 TCTEX1D2Q8WW35 142 aa6.15□□□□□ -1.42
TPM1-231ENST00000561395 RAB39BQ96DA2 213 aa6.15□□□□□ -1.42
TPM1-231ENST00000561395 HSD17B10Q99714 261 aaKnown RBP6.15□□□□□ -1.42
TPM1-231ENST00000561395 SPIN2AQ99865 258 aa6.15□□□□□ -1.42
TPM1-231ENST00000561395 SPIN2BQ9BPZ2 258 aa6.15□□□□□ -1.42
TPM1-231ENST00000561395 RNF126Q9BV68 326 aa6.15□□□□□ -1.42
TPM1-231ENST00000561395 GON7Q9BXV9 100 aa6.15□□□□□ -1.42
TPM1-231ENST00000561395 GSKIPQ9P0R6 139 aa6.15□□□□□ -1.42
TPM1-231ENST00000561395 GAB2Q9UQC2 676 aa6.15□□□□□ -1.42
TPM1-231ENST00000561395 SAA2-SAA4A0A096LPE2 208 aa6.14□□□□□ -1.43
TPM1-231ENST00000561395 A0A1W2PPE3 182 aa6.14□□□□□ -1.43
TPM1-231ENST00000561395 RNF222A6NCQ9 220 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms