RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 TLCD1Q96CP7 247 aa1.03□□□□□ -2.24
USP8-218ENST00000561330 GRIN2BQ13224 1484 aa1.03□□□□□ -2.24
USP8-218ENST00000561330 ZNF737O75373 536 aa1.02□□□□□ -2.25
USP8-218ENST00000561330 GPX2P18283 190 aa1.02□□□□□ -2.25
USP8-218ENST00000561330 NUP153P49790 1475 aaKnown RBP1.02□□□□□ -2.25
USP8-218ENST00000561330 CDK9P50750 372 aaKnown RBP1.02□□□□□ -2.25
USP8-218ENST00000561330 RBM11P57052 281 aaKnown RBP1.02□□□□□ -2.25
USP8-218ENST00000561330 CLEC12BQ2HXU8 276 aa1.02□□□□□ -2.25
USP8-218ENST00000561330 LCN8Q6JVE9 175 aa1.02□□□□□ -2.25
USP8-218ENST00000561330 KRTAP5-10Q6L8G5 202 aa1.02□□□□□ -2.25
USP8-218ENST00000561330 UNQ6190/PRO20217Q6UXQ8 127 aa1.02□□□□□ -2.25
USP8-218ENST00000561330 COPS6Q7L5N1 327 aa1.02□□□□□ -2.25
USP8-218ENST00000561330 DAND5Q8N907 189 aa1.02□□□□□ -2.25
USP8-218ENST00000561330 ATP6V1C2Q8NEY4 427 aa1.02□□□□□ -2.25
USP8-218ENST00000561330 CPNE2Q96FN4 548 aaPredicted RBP1.02□□□□□ -2.25
USP8-218ENST00000561330 Q96M85 177 aa1.02□□□□□ -2.25
USP8-218ENST00000561330 TAAR3PQ9P1P4 343 aa1.02□□□□□ -2.25
USP8-218ENST00000561330 F8A1P23610 371 aa1.01□□□□□ -2.25
USP8-218ENST00000561330 AKR1C3P42330 323 aa1.01□□□□□ -2.25
USP8-218ENST00000561330 RPL27AP46776 148 aaKnown RBP1.01□□□□□ -2.25
USP8-218ENST00000561330 GABRA2P47869 451 aa1.01□□□□□ -2.25
USP8-218ENST00000561330 TMEM267Q0VDI3 215 aaPredicted RBP1.01□□□□□ -2.25
USP8-218ENST00000561330 SPATA12Q7Z6I5 190 aa1.01□□□□□ -2.25
USP8-218ENST00000561330 BAP18Q8IXM2 172 aa1.01□□□□□ -2.25
USP8-218ENST00000561330 OR51T1Q8NGJ9 327 aa1.01□□□□□ -2.25
USP8-218ENST00000561330 METTL9Q9H1A3 318 aa1.01□□□□□ -2.25
USP8-218ENST00000561330 VCX3BQ9H321 246 aa1.01□□□□□ -2.25
USP8-218ENST00000561330 IGKV3-7A0A075B6H7 116 aa1□□□□□ -2.25
USP8-218ENST00000561330 TRAV8-1A0A0A6YYK1 113 aa1□□□□□ -2.25
USP8-218ENST00000561330 TPM1P09493 284 aa1□□□□□ -2.25
USP8-218ENST00000561330 IL9P15248 144 aa1□□□□□ -2.25
USP8-218ENST00000561330 CCR2P41597 374 aa1□□□□□ -2.25
USP8-218ENST00000561330 H2BFSP57053 126 aa1□□□□□ -2.25
USP8-218ENST00000561330 KTN1-AS1Q86SY8 53 aa1□□□□□ -2.25
USP8-218ENST00000561330 C1orf174Q8IYL3 243 aa1□□□□□ -2.25
USP8-218ENST00000561330 LRRC34Q8IZ02 419 aa1□□□□□ -2.25
USP8-218ENST00000561330 OR52E4Q8NGH9 312 aa1□□□□□ -2.25
USP8-218ENST00000561330 OR5AK3PQ8NH89 298 aa1□□□□□ -2.25
USP8-218ENST00000561330 STOML3Q8TAV4 291 aa1□□□□□ -2.25
USP8-218ENST00000561330 Q8WTZ3 238 aa1□□□□□ -2.25
USP8-218ENST00000561330 MS4A6EQ96DS6 147 aa1□□□□□ -2.25
USP8-218ENST00000561330 DOHHQ9BU89 302 aa1□□□□□ -2.25
USP8-218ENST00000561330 TMEM222Q9H0R3 208 aa1□□□□□ -2.25
USP8-218ENST00000561330 CST9LQ9H4G1 147 aa1□□□□□ -2.25
USP8-218ENST00000561330 RTTNQ86VV8 2226 aa0.99□□□□□ -2.25
USP8-218ENST00000561330 KLRC4O43908 158 aa0.99□□□□□ -2.25
USP8-218ENST00000561330 IFNGR2P38484 337 aa0.99□□□□□ -2.25
USP8-218ENST00000561330 CD79BP40259 229 aa0.99□□□□□ -2.25
USP8-218ENST00000561330 SNAP25P60880 206 aa0.99□□□□□ -2.25
USP8-218ENST00000561330 PRB3Q04118 309 aaPredicted RBP0.99□□□□□ -2.25
USP8-218ENST00000561330 USF2Q15853 346 aaPredicted RBP0.99□□□□□ -2.25
USP8-218ENST00000561330 SLC36A2Q495M3 483 aa0.99□□□□□ -2.25
USP8-218ENST00000561330 AADACL4Q5VUY2 407 aa0.99□□□□□ -2.25
USP8-218ENST00000561330 LYZL1Q6UWQ5 148 aa0.99□□□□□ -2.25
USP8-218ENST00000561330 C17orf78Q8N4C9 275 aa0.99□□□□□ -2.25
USP8-218ENST00000561330 SLC7A6Q92536 515 aa0.99□□□□□ -2.25
USP8-218ENST00000561330 SFRP2Q96HF1 295 aa0.99□□□□□ -2.25
USP8-218ENST00000561330 PARVAQ9NVD7 372 aa0.99□□□□□ -2.25
USP8-218ENST00000561330 EMC3Q9P0I2 261 aa0.99□□□□□ -2.25
USP8-218ENST00000561330 KLK5Q9Y337 293 aaPredicted RBP0.99□□□□□ -2.25
USP8-218ENST00000561330 POLR3HQ9Y535 204 aaPredicted RBP0.99□□□□□ -2.25
USP8-218ENST00000561330 CUL9Q8IWT3 2517 aa0.98□□□□□ -2.25
USP8-218ENST00000561330 DAPL1A0PJW8 107 aa0.98□□□□□ -2.25
USP8-218ENST00000561330 ZNF879B4DU55 563 aa0.98□□□□□ -2.25
USP8-218ENST00000561330 GOLGA8RI6L899 631 aa0.98□□□□□ -2.25
USP8-218ENST00000561330 M0R381 172 aa0.98□□□□□ -2.25
USP8-218ENST00000561330 BRI3O95415 125 aa0.98□□□□□ -2.25
USP8-218ENST00000561330 CRPP02741 224 aa0.98□□□□□ -2.25
USP8-218ENST00000561330 KDELR2P33947 212 aa0.98□□□□□ -2.25
USP8-218ENST00000561330 BLIDQ8IZY5 108 aa0.98□□□□□ -2.25
USP8-218ENST00000561330 OR1L8Q8NGR8 309 aa0.98□□□□□ -2.25
USP8-218ENST00000561330 OR13C8Q8NGS7 320 aa0.98□□□□□ -2.25
USP8-218ENST00000561330 ZNF75CPQ92670 426 aaPredicted RBP0.98□□□□□ -2.25
USP8-218ENST00000561330 CHMP5Q9NZZ3 219 aa0.98□□□□□ -2.25
USP8-218ENST00000561330 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
USP8-218ENST00000561330 METTL15A6NJ78 407 aa0.97□□□□□ -2.25
USP8-218ENST00000561330 SERPINA7P05543 415 aa0.97□□□□□ -2.25
USP8-218ENST00000561330 LINC00614P0C842 121 aa0.97□□□□□ -2.25
USP8-218ENST00000561330 CCR7P32248 378 aa0.97□□□□□ -2.25
USP8-218ENST00000561330 EMP1P54849 157 aa0.97□□□□□ -2.25
USP8-218ENST00000561330 TMEM33P57088 247 aa0.97□□□□□ -2.25
USP8-218ENST00000561330 LGALS9BQ3B8N2 356 aa0.97□□□□□ -2.25
USP8-218ENST00000561330 FAM45BPQ6NSW5 357 aa0.97□□□□□ -2.25
USP8-218ENST00000561330 FP248Q71RG6 208 aaPredicted RBP0.97□□□□□ -2.25
USP8-218ENST00000561330 PACRGLQ8N7B6 248 aa0.97□□□□□ -2.25
USP8-218ENST00000561330 LRRC45Q96CN5 670 aa0.97□□□□□ -2.25
USP8-218ENST00000561330 C19orf60Q96EN9 201 aa0.97□□□□□ -2.25
USP8-218ENST00000561330 NMNAT3Q96T66 252 aa0.97□□□□□ -2.25
USP8-218ENST00000561330 HDGFL3Q9Y3E1 203 aa0.97□□□□□ -2.25
USP8-218ENST00000561330 TMEM94Q12767 1356 aa0.96□□□□□ -2.26
USP8-218ENST00000561330 SCN9AQ15858 1988 aa0.96□□□□□ -2.26
USP8-218ENST00000561330 HMSDA8MTL9 139 aa0.96□□□□□ -2.26
USP8-218ENST00000561330 MRPS14O60783 128 aaKnown RBP0.96□□□□□ -2.26
USP8-218ENST00000561330 CIAO1O76071 339 aa0.96□□□□□ -2.26
USP8-218ENST00000561330 ATP5G1P05496 136 aa0.96□□□□□ -2.26
USP8-218ENST00000561330 TBPL1P62380 186 aa0.96□□□□□ -2.26
USP8-218ENST00000561330 HOXC5Q00444 222 aa0.96□□□□□ -2.26
USP8-218ENST00000561330 PLCXD2Q0VAA5 305 aa0.96□□□□□ -2.26
USP8-218ENST00000561330 SMAGPQ0VAQ4 97 aa0.96□□□□□ -2.26
USP8-218ENST00000561330 MIAQ16674 131 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms