RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, human

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB1-223	ENST00000561304	C4orf3	Q8WVX3	66 aa		5.75	□□□□□ -1.49
ZEB1-223	ENST00000561304	OR5B12	Q96R08	314 aa		5.75	□□□□□ -1.49
ZEB1-223	ENST00000561304	CMSS1	Q9BQ75	279 aa	Known RBP	5.75	□□□□□ -1.49
ZEB1-223	ENST00000561304	FAM103A1	Q9BTL3	118 aa	Known RBP	5.75	□□□□□ -1.49
ZEB1-223	ENST00000561304	URM1	Q9BTM9	101 aa	Known RBP	5.75	□□□□□ -1.49
ZEB1-223	ENST00000561304	ALX4	Q9H161	411 aa	Predicted RBP	5.75	□□□□□ -1.49
ZEB1-223	ENST00000561304	PIPOX	Q9P0Z9	390 aa		5.75	□□□□□ -1.49
ZEB1-223	ENST00000561304	ELF5	Q9UKW6	265 aa	Predicted RBP	5.75	□□□□□ -1.49
ZEB1-223	ENST00000561304		V9GY05	133 aa		5.75	□□□□□ -1.49
ZEB1-223	ENST00000561304	RYR3	Q15413	4870 aa		5.75	□□□□□ -1.49
ZEB1-223	ENST00000561304	SORL1	Q92673	2214 aa		5.74	□□□□□ -1.49
ZEB1-223	ENST00000561304	IGKV1D-8	A0A087WSZ0	117 aa		5.74	□□□□□ -1.49
ZEB1-223	ENST00000561304	TRAV41	A0A0B4J266	112 aa		5.74	□□□□□ -1.49
ZEB1-223	ENST00000561304	OR5H14	A6NHG9	310 aa		5.74	□□□□□ -1.49
ZEB1-223	ENST00000561304	IFITM5	A6NNB3	132 aa		5.74	□□□□□ -1.49
ZEB1-223	ENST00000561304		I3L521	148 aa		5.74	□□□□□ -1.49
ZEB1-223	ENST00000561304	MFNG	O00587	321 aa		5.74	□□□□□ -1.49
ZEB1-223	ENST00000561304	ITGB1BP1	O14713	200 aa		5.74	□□□□□ -1.49
ZEB1-223	ENST00000561304	RRH	O14718	337 aa		5.74	□□□□□ -1.49
ZEB1-223	ENST00000561304	ATP6V1G2	O95670	118 aa		5.74	□□□□□ -1.49
ZEB1-223	ENST00000561304	FCGR3A	P08637	254 aa		5.74	□□□□□ -1.49
ZEB1-223	ENST00000561304	GNB3	P16520	340 aa		5.74	□□□□□ -1.49
ZEB1-223	ENST00000561304	CEACAM6	P40199	344 aa		5.74	□□□□□ -1.49
ZEB1-223	ENST00000561304	CRIP2	P52943	208 aa	Predicted RBP	5.74	□□□□□ -1.49
ZEB1-223	ENST00000561304	SSBP2	P81877	361 aa	Predicted RBP	5.74	□□□□□ -1.49
ZEB1-223	ENST00000561304	KRTAP19-4	Q3LI73	84 aa		5.74	□□□□□ -1.49
ZEB1-223	ENST00000561304	IGSF11	Q5DX21	431 aa		5.74	□□□□□ -1.49
ZEB1-223	ENST00000561304	C22orf42	Q6IC83	251 aa		5.74	□□□□□ -1.49
ZEB1-223	ENST00000561304	MINDY2	Q8NBR6	621 aa		5.74	□□□□□ -1.49
ZEB1-223	ENST00000561304	OR11H1	Q8NG94	326 aa		5.74	□□□□□ -1.49
ZEB1-223	ENST00000561304	OR5AN1	Q8NGI8	311 aa		5.74	□□□□□ -1.49
ZEB1-223	ENST00000561304	PTX4	Q96A99	478 aa		5.74	□□□□□ -1.49
ZEB1-223	ENST00000561304	PRR25	Q96S07	402 aa		5.74	□□□□□ -1.49
ZEB1-223	ENST00000561304	GON7	Q9BXV9	100 aa		5.74	□□□□□ -1.49
ZEB1-223	ENST00000561304	VCX3B	Q9H321	246 aa		5.74	□□□□□ -1.49
ZEB1-223	ENST00000561304	RIMS4	Q9H426	269 aa	Predicted RBP	5.74	□□□□□ -1.49
ZEB1-223	ENST00000561304	RDH8	Q9NYR8	311 aa		5.74	□□□□□ -1.49
ZEB1-223	ENST00000561304	ZNF230	Q9UIE0	474 aa	Predicted RBP	5.74	□□□□□ -1.49
ZEB1-223	ENST00000561304	SCOC	Q9UIL1	159 aa		5.74	□□□□□ -1.49
ZEB1-223	ENST00000561304	RAB26	Q9ULW5	256 aa		5.74	□□□□□ -1.49
ZEB1-223	ENST00000561304	WASHC3	Q9Y3C0	194 aa		5.74	□□□□□ -1.49
ZEB1-223	ENST00000561304	LRRC42	Q9Y546	428 aa		5.74	□□□□□ -1.49
ZEB1-223	ENST00000561304	A3GALT2	U3KPV4	340 aa		5.74	□□□□□ -1.49
ZEB1-223	ENST00000561304	CSMD3	Q7Z407	3707 aa		5.73	□□□□□ -1.49
ZEB1-223	ENST00000561304		A0A075B6Q4	140 aa		5.73	□□□□□ -1.49
ZEB1-223	ENST00000561304	TRAV1-2	A0A0B4J238	106 aa		5.73	□□□□□ -1.49
ZEB1-223	ENST00000561304	TRDV1	A0A1B0GX56	115 aa		5.73	□□□□□ -1.49
ZEB1-223	ENST00000561304		A0A1W2PN81	502 aa		5.73	□□□□□ -1.49
ZEB1-223	ENST00000561304	TRDC	B7Z8K6	153 aa		5.73	□□□□□ -1.49
ZEB1-223	ENST00000561304		H7C2Y5	167 aa		5.73	□□□□□ -1.49
ZEB1-223	ENST00000561304	RAB27B	O00194	218 aa		5.73	□□□□□ -1.49
ZEB1-223	ENST00000561304	ARPC1B	O15143	372 aa	Known RBP	5.73	□□□□□ -1.49
ZEB1-223	ENST00000561304	HSPA12A	O43301	675 aa		5.73	□□□□□ -1.49
ZEB1-223	ENST00000561304	CA2	P00918	260 aa		5.73	□□□□□ -1.49
ZEB1-223	ENST00000561304	GSTT2	P0CG29	244 aa		5.73	□□□□□ -1.49
ZEB1-223	ENST00000561304	GSTT2B	P0CG30	244 aa		5.73	□□□□□ -1.49
ZEB1-223	ENST00000561304	HIST1H1D	P16402	221 aa	Known RBP	5.73	□□□□□ -1.49
ZEB1-223	ENST00000561304	ZBTB25	P24278	435 aa		5.73	□□□□□ -1.49
ZEB1-223	ENST00000561304	CHRNA7	P36544	502 aa		5.73	□□□□□ -1.49
ZEB1-223	ENST00000561304	HSPA13	P48723	471 aa		5.73	□□□□□ -1.49
ZEB1-223	ENST00000561304	RAB9A	P51151	201 aa		5.73	□□□□□ -1.49
ZEB1-223	ENST00000561304	GABARAPL2	P60520	117 aa		5.73	□□□□□ -1.49
ZEB1-223	ENST00000561304	CX3CL1	P78423	397 aa		5.73	□□□□□ -1.49
ZEB1-223	ENST00000561304	PSG5	Q15238	335 aa		5.73	□□□□□ -1.49
ZEB1-223	ENST00000561304	DEFB121	Q5J5C9	76 aa		5.73	□□□□□ -1.49
ZEB1-223	ENST00000561304	UBE2U	Q5VVX9	321 aa		5.73	□□□□□ -1.49
ZEB1-223	ENST00000561304	LIN54	Q6MZP7	749 aa		5.73	□□□□□ -1.49
ZEB1-223	ENST00000561304	OR56B1	Q8NGI3	324 aa		5.73	□□□□□ -1.49
ZEB1-223	ENST00000561304	OR5M8	Q8NGP6	311 aa		5.73	□□□□□ -1.49
ZEB1-223	ENST00000561304	OR10R2	Q8NGX6	335 aa		5.73	□□□□□ -1.49
ZEB1-223	ENST00000561304	DPF1	Q92782	380 aa		5.73	□□□□□ -1.49
ZEB1-223	ENST00000561304	RAB3C	Q96E17	227 aa		5.73	□□□□□ -1.49
ZEB1-223	ENST00000561304	CLCC1	Q96S66	551 aa		5.73	□□□□□ -1.49
ZEB1-223	ENST00000561304	CABLES2	Q9BTV7	478 aa		5.73	□□□□□ -1.49
ZEB1-223	ENST00000561304	MCRIP2	Q9BUT9	160 aa	Known RBP	5.73	□□□□□ -1.49
ZEB1-223	ENST00000561304	TOLLIP	Q9H0E2	274 aa		5.73	□□□□□ -1.49
ZEB1-223	ENST00000561304	KIAA1456	Q9P272	454 aa		5.73	□□□□□ -1.49
ZEB1-223	ENST00000561304	RAB22A	Q9UL26	194 aa		5.73	□□□□□ -1.49
ZEB1-223	ENST00000561304	DYNC2H1	Q8NCM8	4307 aa	Known RBP	5.73	□□□□□ -1.49
ZEB1-223	ENST00000561304	IGHV4OR15-8	A0A075B7B6	117 aa		5.72	□□□□□ -1.49
ZEB1-223	ENST00000561304		A0A087WW49	117 aa		5.72	□□□□□ -1.49
ZEB1-223	ENST00000561304	SEC14L6	B5MCN3	397 aa		5.72	□□□□□ -1.49
ZEB1-223	ENST00000561304		M0R1X1	148 aa		5.72	□□□□□ -1.49
ZEB1-223	ENST00000561304	BET1	O15155	118 aa		5.72	□□□□□ -1.49
ZEB1-223	ENST00000561304	FABP7	O15540	132 aa		5.72	□□□□□ -1.49
ZEB1-223	ENST00000561304	IGLV2-23	P01705	113 aa		5.72	□□□□□ -1.49
ZEB1-223	ENST00000561304	OR5H8	P0DN80	308 aa		5.72	□□□□□ -1.49
ZEB1-223	ENST00000561304	RAB3B	P20337	219 aa		5.72	□□□□□ -1.49
ZEB1-223	ENST00000561304	MYL9	P24844	172 aa		5.72	□□□□□ -1.49
ZEB1-223	ENST00000561304	SLURP1	P55000	103 aa		5.72	□□□□□ -1.49
ZEB1-223	ENST00000561304	DGCR2	P98153	550 aa		5.72	□□□□□ -1.49
ZEB1-223	ENST00000561304	RUNX1	Q01196	453 aa		5.72	□□□□□ -1.49
ZEB1-223	ENST00000561304	DEFA5	Q01523	94 aa		5.72	□□□□□ -1.49
ZEB1-223	ENST00000561304	PJVK	Q0ZLH3	352 aa		5.72	□□□□□ -1.49
ZEB1-223	ENST00000561304	PLGLA	Q15195	96 aa		5.72	□□□□□ -1.49
ZEB1-223	ENST00000561304	ZNF660	Q6AZW8	331 aa	Predicted RBP	5.72	□□□□□ -1.49
ZEB1-223	ENST00000561304	SPART	Q8N0X7	666 aa		5.72	□□□□□ -1.49
ZEB1-223	ENST00000561304	OR4A4P	Q8NGN8	299 aa		5.72	□□□□□ -1.49
ZEB1-223	ENST00000561304	ABHD5	Q8WTS1	349 aa		5.72	□□□□□ -1.49
ZEB1-223	ENST00000561304	UBE2E2	Q96LR5	201 aa		5.72	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms