RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 CA2P00918 260 aa13.37□□□□□ -0.27
CDC42BPB-208ENST00000561271 OR8U9P0C7N5 309 aa13.37□□□□□ -0.27
CDC42BPB-208ENST00000561271 CRIP2P52943 208 aaPredicted RBP13.37□□□□□ -0.27
CDC42BPB-208ENST00000561271 DEFB121Q5J5C9 76 aa13.37□□□□□ -0.27
CDC42BPB-208ENST00000561271 PDPNQ86YL7 162 aa13.37□□□□□ -0.27
CDC42BPB-208ENST00000561271 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.37□□□□□ -0.27
CDC42BPB-208ENST00000561271 TSNAXQ99598 290 aaKnown RBP13.37□□□□□ -0.27
CDC42BPB-208ENST00000561271 SLC35D1Q9NTN3 355 aa13.37□□□□□ -0.27
CDC42BPB-208ENST00000561271 FOXA2Q9Y261 457 aaPredicted RBP13.37□□□□□ -0.27
CDC42BPB-208ENST00000561271 VSIG4Q9Y279 399 aa13.37□□□□□ -0.27
CDC42BPB-208ENST00000561271 IGKV1D-8A0A087WSZ0 117 aa13.36□□□□□ -0.27
CDC42BPB-208ENST00000561271 NOTOA8MTQ0 251 aa13.36□□□□□ -0.27
CDC42BPB-208ENST00000561271 SEC14L6B5MCN3 397 aa13.36□□□□□ -0.27
CDC42BPB-208ENST00000561271 I3L521 148 aa13.36□□□□□ -0.27
CDC42BPB-208ENST00000561271 SLC25A17O43808 307 aa13.36□□□□□ -0.27
CDC42BPB-208ENST00000561271 SPDEFO95238 335 aa13.36□□□□□ -0.27
CDC42BPB-208ENST00000561271 EGR2P11161 476 aaPredicted RBP13.36□□□□□ -0.27
CDC42BPB-208ENST00000561271 TALDO1P37837 337 aa13.36□□□□□ -0.27
CDC42BPB-208ENST00000561271 RAB9AP51151 201 aa13.36□□□□□ -0.27
CDC42BPB-208ENST00000561271 RPS16P62249 146 aaKnown RBP13.36□□□□□ -0.27
CDC42BPB-208ENST00000561271 ZNF773Q6PK81 442 aa13.36□□□□□ -0.27
CDC42BPB-208ENST00000561271 PPP1R27Q86WC6 154 aa13.36□□□□□ -0.27
CDC42BPB-208ENST00000561271 LGALS14Q8TCE9 139 aa13.36□□□□□ -0.27
CDC42BPB-208ENST00000561271 RNF5Q99942 180 aa13.36□□□□□ -0.27
CDC42BPB-208ENST00000561271 GINS4Q9BRT9 223 aa13.36□□□□□ -0.27
CDC42BPB-208ENST00000561271 ALX4Q9H161 411 aaPredicted RBP13.36□□□□□ -0.27
CDC42BPB-208ENST00000561271 OR51E2Q9H255 320 aa13.36□□□□□ -0.27
CDC42BPB-208ENST00000561271 SDHAF2Q9NX18 166 aa13.36□□□□□ -0.27
CDC42BPB-208ENST00000561271 DAPK2Q9UIK4 370 aa13.36□□□□□ -0.27
CDC42BPB-208ENST00000561271 DGCR2P98153 550 aa13.35□□□□□ -0.27
CDC42BPB-208ENST00000561271 ZNF616Q08AN1 781 aa13.35□□□□□ -0.27
CDC42BPB-208ENST00000561271 C9orf66Q5T8R8 295 aa13.35□□□□□ -0.27
CDC42BPB-208ENST00000561271 SFXN4Q6P4A7 337 aa13.35□□□□□ -0.27
CDC42BPB-208ENST00000561271 UNQ5815/PRO19632Q6UWF5 114 aa13.35□□□□□ -0.27
CDC42BPB-208ENST00000561271 OR1N2Q8NGR9 330 aa13.35□□□□□ -0.27
CDC42BPB-208ENST00000561271 GRPEL2Q8TAA5 225 aa13.35□□□□□ -0.27
CDC42BPB-208ENST00000561271 YTHDF1Q9BYJ9 559 aaKnown RBP13.35□□□□□ -0.27
CDC42BPB-208ENST00000561271 SSR3Q9UNL2 185 aa13.35□□□□□ -0.27
CDC42BPB-208ENST00000561271 RRP15Q9Y3B9 282 aaKnown RBP13.35□□□□□ -0.27
CDC42BPB-208ENST00000561271 TMEM235A6NFC5 223 aa13.34□□□□□ -0.27
CDC42BPB-208ENST00000561271 DIRAS3O95661 229 aa13.34□□□□□ -0.27
CDC42BPB-208ENST00000561271 OR8U8P0C7N1 319 aa13.34□□□□□ -0.27
CDC42BPB-208ENST00000561271 RUNX1Q01196 453 aa13.34□□□□□ -0.27
CDC42BPB-208ENST00000561271 NEDD8Q15843 81 aa13.34□□□□□ -0.27
CDC42BPB-208ENST00000561271 ACTBL2Q562R1 376 aa13.34□□□□□ -0.27
CDC42BPB-208ENST00000561271 H1FOOQ8IZA3 346 aaPredicted RBP13.34□□□□□ -0.27
CDC42BPB-208ENST00000561271 TCTEX1D1Q8N7M0 179 aa13.34□□□□□ -0.27
CDC42BPB-208ENST00000561271 LFNGQ8NES3 379 aa13.34□□□□□ -0.27
CDC42BPB-208ENST00000561271 NUDCD2Q8WVJ2 157 aa13.34□□□□□ -0.27
CDC42BPB-208ENST00000561271 ARPC1AQ92747 370 aa13.34□□□□□ -0.27
CDC42BPB-208ENST00000561271 FLYWCH2Q96CP2 140 aaKnown RBP13.34□□□□□ -0.27
CDC42BPB-208ENST00000561271 RNF167Q9H6Y7 350 aa13.34□□□□□ -0.27
CDC42BPB-208ENST00000561271 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.34□□□□□ -0.27
CDC42BPB-208ENST00000561271 RBM7Q9Y580 266 aaKnown RBP13.34□□□□□ -0.27
CDC42BPB-208ENST00000561271 NUBP2Q9Y5Y2 271 aa13.34□□□□□ -0.27
CDC42BPB-208ENST00000561271 ARPC1BO15143 372 aaKnown RBP13.33□□□□□ -0.28
CDC42BPB-208ENST00000561271 IGLV2-23P01705 113 aa13.33□□□□□ -0.28
CDC42BPB-208ENST00000561271 CLEC2LP0C7M8 214 aa13.33□□□□□ -0.28
CDC42BPB-208ENST00000561271 DTYMKP23919 212 aa13.33□□□□□ -0.28
CDC42BPB-208ENST00000561271 SDC2P34741 201 aa13.33□□□□□ -0.28
CDC42BPB-208ENST00000561271 SSBP2P81877 361 aaPredicted RBP13.33□□□□□ -0.28
CDC42BPB-208ENST00000561271 MXD1Q05195 221 aa13.33□□□□□ -0.28
CDC42BPB-208ENST00000561271 ZNF260Q3ZCT1 412 aa13.33□□□□□ -0.28
CDC42BPB-208ENST00000561271 CDNFQ49AH0 187 aa13.33□□□□□ -0.28
CDC42BPB-208ENST00000561271 C11orf87Q6NUJ2 197 aa13.33□□□□□ -0.28
CDC42BPB-208ENST00000561271 Q6ZS49 121 aa13.33□□□□□ -0.28
CDC42BPB-208ENST00000561271 TPRA1Q86W33 373 aa13.33□□□□□ -0.28
CDC42BPB-208ENST00000561271 HARBI1Q96MB7 349 aa13.33□□□□□ -0.28
CDC42BPB-208ENST00000561271 PRR25Q96S07 402 aa13.33□□□□□ -0.28
CDC42BPB-208ENST00000561271 LOC100506127A0A0U1RQW1 187 aa13.32□□□□□ -0.28
CDC42BPB-208ENST00000561271 IGHV3-11P01762 117 aa13.32□□□□□ -0.28
CDC42BPB-208ENST00000561271 SLURP1P55000 103 aa13.32□□□□□ -0.28
CDC42BPB-208ENST00000561271 TPPP2P59282 170 aa13.32□□□□□ -0.28
CDC42BPB-208ENST00000561271 TMEM267Q0VDI3 215 aaPredicted RBP13.32□□□□□ -0.28
CDC42BPB-208ENST00000561271 FXYD3Q14802 87 aa13.32□□□□□ -0.28
CDC42BPB-208ENST00000561271 ARL6IP1Q15041 203 aa13.32□□□□□ -0.28
CDC42BPB-208ENST00000561271 HACD4Q5VWC8 232 aa13.32□□□□□ -0.28
CDC42BPB-208ENST00000561271 ZNF562Q6V9R5 426 aa13.32□□□□□ -0.28
CDC42BPB-208ENST00000561271 BVESQ8NE79 360 aa13.32□□□□□ -0.28
CDC42BPB-208ENST00000561271 MS4A10Q96PG2 267 aa13.32□□□□□ -0.28
CDC42BPB-208ENST00000561271 SCOCQ9UIL1 159 aa13.32□□□□□ -0.28
CDC42BPB-208ENST00000561271 IGHV4OR15-8A0A075B7B6 117 aa13.31□□□□□ -0.28
CDC42BPB-208ENST00000561271 A0A087WW49 117 aa13.31□□□□□ -0.28
CDC42BPB-208ENST00000561271 J3QRK9 145 aa13.31□□□□□ -0.28
CDC42BPB-208ENST00000561271 LGALS1P09382 135 aaKnown RBP13.31□□□□□ -0.28
CDC42BPB-208ENST00000561271 ECI1P42126 302 aa13.31□□□□□ -0.28
CDC42BPB-208ENST00000561271 PJVKQ0ZLH3 352 aa13.31□□□□□ -0.28
CDC42BPB-208ENST00000561271 SRSF7Q16629 238 aaKnown RBP eCLIP13.31□□□□□ -0.28
CDC42BPB-208ENST00000561271 RTL8BQ17RB0 113 aa13.31□□□□□ -0.28
CDC42BPB-208ENST00000561271 AKIRIN2Q53H80 203 aa13.31□□□□□ -0.28
CDC42BPB-208ENST00000561271 PYHIN1Q6K0P9 492 aa13.31□□□□□ -0.28
CDC42BPB-208ENST00000561271 DCUN1D4Q92564 292 aa13.31□□□□□ -0.28
CDC42BPB-208ENST00000561271 ST6GALNAC5Q9BVH7 336 aa13.31□□□□□ -0.28
CDC42BPB-208ENST00000561271 RHBDL2Q9NX52 303 aa13.31□□□□□ -0.28
CDC42BPB-208ENST00000561271 SHOXO15266 292 aa13.3□□□□□ -0.28
CDC42BPB-208ENST00000561271 RAMP3O60896 148 aa13.3□□□□□ -0.28
CDC42BPB-208ENST00000561271 CRYGBP07316 175 aa13.3□□□□□ -0.28
CDC42BPB-208ENST00000561271 GNG2P59768 71 aa13.3□□□□□ -0.28
CDC42BPB-208ENST00000561271 CD69Q07108 199 aa13.3□□□□□ -0.28
CDC42BPB-208ENST00000561271 CBX3Q13185 183 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms