RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 CMTM3Q96MX0 182 aa10.93□□□□□ -0.66
TPM1-230ENST00000561266 PSMB11A5LHX3 300 aa10.92□□□□□ -0.66
TPM1-230ENST00000561266 M0QZ24 198 aa10.92□□□□□ -0.66
TPM1-230ENST00000561266 RRHO14718 337 aa10.92□□□□□ -0.66
TPM1-230ENST00000561266 CTXN2P0C2S0 81 aa10.92□□□□□ -0.66
TPM1-230ENST00000561266 EGR2P11161 476 aaPredicted RBP10.92□□□□□ -0.66
TPM1-230ENST00000561266 FCGR2CP31995 323 aa10.92□□□□□ -0.66
TPM1-230ENST00000561266 MC5RP33032 325 aa10.92□□□□□ -0.66
TPM1-230ENST00000561266 PRSS3P35030 304 aa10.92□□□□□ -0.66
TPM1-230ENST00000561266 RFX2P48378 723 aa10.92□□□□□ -0.66
TPM1-230ENST00000561266 LUMP51884 338 aaPredicted RBP10.92□□□□□ -0.66
TPM1-230ENST00000561266 CFHR3Q02985 330 aa10.92□□□□□ -0.66
TPM1-230ENST00000561266 PSG5Q15238 335 aa10.92□□□□□ -0.66
TPM1-230ENST00000561266 MRGPRG-AS1Q2M3A8 158 aa10.92□□□□□ -0.66
TPM1-230ENST00000561266 RNASE12Q5GAN4 147 aaKnown RBP10.92□□□□□ -0.66
TPM1-230ENST00000561266 ZNF660Q6AZW8 331 aaPredicted RBP10.92□□□□□ -0.66
TPM1-230ENST00000561266 OR5AP2Q8NGF4 316 aa10.92□□□□□ -0.66
TPM1-230ENST00000561266 RAB2BQ8WUD1 216 aa10.92□□□□□ -0.66
TPM1-230ENST00000561266 ABHD1Q96SE0 405 aa10.92□□□□□ -0.66
TPM1-230ENST00000561266 SLC35D1Q9NTN3 355 aa10.92□□□□□ -0.66
TPM1-230ENST00000561266 RBM7Q9Y580 266 aaKnown RBP10.92□□□□□ -0.66
TPM1-230ENST00000561266 FAM25AB3EWG3 89 aa10.91□□□□□ -0.66
TPM1-230ENST00000561266 FAM25CB3EWG5 89 aa10.91□□□□□ -0.66
TPM1-230ENST00000561266 FAM25GB3EWG6 89 aa10.91□□□□□ -0.66
TPM1-230ENST00000561266 G3V318 75 aa10.91□□□□□ -0.66
TPM1-230ENST00000561266 HLA-DRB1P01911 266 aa10.91□□□□□ -0.66
TPM1-230ENST00000561266 PMP2P02689 132 aa10.91□□□□□ -0.66
TPM1-230ENST00000561266 CRYGBP07316 175 aa10.91□□□□□ -0.66
TPM1-230ENST00000561266 CSF1P09603 554 aa10.91□□□□□ -0.66
TPM1-230ENST00000561266 OR5H8P0DN80 308 aa10.91□□□□□ -0.66
TPM1-230ENST00000561266 SOX6P35712 828 aa10.91□□□□□ -0.66
TPM1-230ENST00000561266 ARPC4P59998 168 aa10.91□□□□□ -0.66
TPM1-230ENST00000561266 SSBP2P81877 361 aaPredicted RBP10.91□□□□□ -0.66
TPM1-230ENST00000561266 CDK10Q15131 360 aa10.91□□□□□ -0.66
TPM1-230ENST00000561266 LAX1Q8IWV1 398 aa10.91□□□□□ -0.66
TPM1-230ENST00000561266 ZNF645Q8N7E2 425 aa10.91□□□□□ -0.66
TPM1-230ENST00000561266 CLCC1Q96S66 551 aa10.91□□□□□ -0.66
TPM1-230ENST00000561266 RBM38Q9H0Z9 239 aaKnown RBP10.91□□□□□ -0.66
TPM1-230ENST00000561266 CCL28Q9NRJ3 127 aa10.91□□□□□ -0.66
TPM1-230ENST00000561266 EXTL2Q9UBQ6 330 aa10.91□□□□□ -0.66
TPM1-230ENST00000561266 RBMX2Q9Y388 322 aaKnown RBP10.91□□□□□ -0.66
TPM1-230ENST00000561266 TCRBV4S1A1TA0A5B7 111 aa10.9□□□□□ -0.66
TPM1-230ENST00000561266 ATP6V0E1O15342 81 aa10.9□□□□□ -0.66
TPM1-230ENST00000561266 PPYP01298 95 aa10.9□□□□□ -0.66
TPM1-230ENST00000561266 CBX5P45973 191 aa10.9□□□□□ -0.66
TPM1-230ENST00000561266 RPS16P62249 146 aaKnown RBP10.9□□□□□ -0.66
TPM1-230ENST00000561266 PJVKQ0ZLH3 352 aa10.9□□□□□ -0.66
TPM1-230ENST00000561266 LIN54Q6MZP7 749 aa10.9□□□□□ -0.66
TPM1-230ENST00000561266 MZT2AQ6P582 158 aa10.9□□□□□ -0.66
TPM1-230ENST00000561266 OVCH2Q7RTZ1 564 aa10.9□□□□□ -0.66
TPM1-230ENST00000561266 NDUFA11Q86Y39 141 aa10.9□□□□□ -0.66
TPM1-230ENST00000561266 PDPNQ86YL7 162 aa10.9□□□□□ -0.66
TPM1-230ENST00000561266 CHPT1Q8WUD6 406 aa10.9□□□□□ -0.66
TPM1-230ENST00000561266 SLIRPQ9GZT3 109 aaKnown RBP10.9□□□□□ -0.66
TPM1-230ENST00000561266 OR51J1Q9H342 316 aa10.9□□□□□ -0.66
TPM1-230ENST00000561266 IFT46Q9NQC8 304 aa10.9□□□□□ -0.66
TPM1-230ENST00000561266 NECAP2Q9NVZ3 263 aa10.9□□□□□ -0.66
TPM1-230ENST00000561266 SCOCQ9UIL1 159 aa10.9□□□□□ -0.66
TPM1-230ENST00000561266 WSB1Q9Y6I7 421 aa10.9□□□□□ -0.66
TPM1-230ENST00000561266 AP4M1O00189 453 aa10.89□□□□□ -0.67
TPM1-230ENST00000561266 ARPC1BO15143 372 aaKnown RBP10.89□□□□□ -0.67
TPM1-230ENST00000561266 SLC25A17O43808 307 aa10.89□□□□□ -0.67
TPM1-230ENST00000561266 RBBP9O75884 186 aa10.89□□□□□ -0.67
TPM1-230ENST00000561266 APOA2P02652 100 aa10.89□□□□□ -0.67
TPM1-230ENST00000561266 IGF1P05019 195 aa10.89□□□□□ -0.67
TPM1-230ENST00000561266 HLA-DMAP28067 261 aa10.89□□□□□ -0.67
TPM1-230ENST00000561266 THBS3P49746 956 aa10.89□□□□□ -0.67
TPM1-230ENST00000561266 FXYD4P59646 89 aa10.89□□□□□ -0.67
TPM1-230ENST00000561266 CX3CL1P78423 397 aa10.89□□□□□ -0.67
TPM1-230ENST00000561266 C2orf68Q2NKX9 166 aa10.89□□□□□ -0.67
TPM1-230ENST00000561266 TMEM177Q53S58 311 aa10.89□□□□□ -0.67
TPM1-230ENST00000561266 C19orf54Q5BKX5 351 aa10.89□□□□□ -0.67
TPM1-230ENST00000561266 OR2B11Q5JQS5 317 aa10.89□□□□□ -0.67
TPM1-230ENST00000561266 FOXRED2Q8IWF2 684 aa10.89□□□□□ -0.67
TPM1-230ENST00000561266 OR52I2Q8NH67 350 aa10.89□□□□□ -0.67
TPM1-230ENST00000561266 SECTM1Q8WVN6 248 aa10.89□□□□□ -0.67
TPM1-230ENST00000561266 GIMAP1Q8WWP7 306 aa10.89□□□□□ -0.67
TPM1-230ENST00000561266 AP3S1Q92572 193 aa10.89□□□□□ -0.67
TPM1-230ENST00000561266 FLYWCH2Q96CP2 140 aaKnown RBP10.89□□□□□ -0.67
TPM1-230ENST00000561266 BCL7BQ9BQE9 202 aa10.89□□□□□ -0.67
TPM1-230ENST00000561266 FAM103A1Q9BTL3 118 aaKnown RBP10.89□□□□□ -0.67
TPM1-230ENST00000561266 EHFQ9NZC4 300 aa10.89□□□□□ -0.67
TPM1-230ENST00000561266 CCDC59Q9P031 241 aaKnown RBP10.89□□□□□ -0.67
TPM1-230ENST00000561266 METTL1Q9UBP6 276 aaKnown RBP10.89□□□□□ -0.67
TPM1-230ENST00000561266 NOTCH3Q9UM47 2321 aa10.89□□□□□ -0.67
TPM1-230ENST00000561266 SMIM31A0A1B0GVY4 71 aa10.88□□□□□ -0.67
TPM1-230ENST00000561266 TNFSF12O43508 249 aa10.88□□□□□ -0.67
TPM1-230ENST00000561266 RPLP1P05386 114 aaKnown RBP10.88□□□□□ -0.67
TPM1-230ENST00000561266 PPIFP30405 207 aaKnown RBP10.88□□□□□ -0.67
TPM1-230ENST00000561266 HRH1P35367 487 aa10.88□□□□□ -0.67
TPM1-230ENST00000561266 DYRK1AQ13627 763 aa10.88□□□□□ -0.67
TPM1-230ENST00000561266 DHRS11Q6UWP2 260 aa10.88□□□□□ -0.67
TPM1-230ENST00000561266 R3HDM4Q96D70 268 aa10.88□□□□□ -0.67
TPM1-230ENST00000561266 RNF5Q99942 180 aa10.88□□□□□ -0.67
TPM1-230ENST00000561266 KLK15Q9H2R5 256 aa10.88□□□□□ -0.67
TPM1-230ENST00000561266 MMP27Q9H306 513 aa10.88□□□□□ -0.67
TPM1-230ENST00000561266 PARP11Q9NR21 331 aa10.88□□□□□ -0.67
TPM1-230ENST00000561266 TAS2R8Q9NYW2 309 aa10.88□□□□□ -0.67
TPM1-230ENST00000561266 KIAA1456Q9P272 454 aa10.88□□□□□ -0.67
TPM1-230ENST00000561266 KLK11Q9UBX7 282 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms